Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CFAP99D6REC4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CFAP99D6REC4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CFAP99D6REC4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CFAP99D6REC4 Y_RNA.537-201ENST00000384626 109 ntBASIC3.17□□□□□ -1.9
CFAP99D6REC4 RN7SKP123-201ENST00000410732 291 ntBASIC3.17□□□□□ -1.9
CFAP99D6REC4 RNA5SP120-201ENST00000410900 112 ntBASIC3.17□□□□□ -1.9
CFAP99D6REC4 AC108729.3-201ENST00000513484 108 ntBASIC3.17□□□□□ -1.9
CFAP99D6REC4 RNA5SP217-201ENST00000515959 91 ntBASIC3.17□□□□□ -1.9
CFAP99D6REC4 MIR4709-201ENST00000577272 72 ntBASIC3.17□□□□□ -1.9
CFAP99D6REC4 MIR5680-201ENST00000577577 84 ntBASIC3.17□□□□□ -1.9
CFAP99D6REC4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CFAP99D6REC4 RNU6-228P-201ENST00000362700 106 ntBASIC3.16□□□□□ -1.9
CFAP99D6REC4 SNORA38.1-201ENST00000364172 131 ntBASIC3.16□□□□□ -1.9
CFAP99D6REC4 RNU6-1276P-201ENST00000365372 104 ntBASIC3.16□□□□□ -1.9
CFAP99D6REC4 MIR660-201ENST00000385235 97 ntBASIC3.16□□□□□ -1.9
CFAP99D6REC4 SNORA48.1-201ENST00000390879 135 ntBASIC3.16□□□□□ -1.9
CFAP99D6REC4 RNU2-40P-201ENST00000410833 196 ntBASIC3.16□□□□□ -1.9
CFAP99D6REC4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.16□□□□□ -1.9
CFAP99D6REC4 RNU7-26P-201ENST00000458980 63 ntBASIC3.16□□□□□ -1.9
CFAP99D6REC4 RNA5SP367-201ENST00000516557 118 ntBASIC3.16□□□□□ -1.9
CFAP99D6REC4 MIR2682-201ENST00000580305 110 ntBASIC3.16□□□□□ -1.9
CFAP99D6REC4 MIR548AR-201ENST00000582191 57 ntBASIC3.16□□□□□ -1.9
CFAP99D6REC4 AL161756.2-201ENST00000604597 246 ntBASIC3.16□□□□□ -1.9
CFAP99D6REC4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CFAP99D6REC4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CFAP99D6REC4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CFAP99D6REC4 SNORD116-10-201ENST00000363791 102 ntBASIC3.15□□□□□ -1.91
CFAP99D6REC4 SNORD115-35-201ENST00000365122 82 ntBASIC3.15□□□□□ -1.91
CFAP99D6REC4 MIR23A-201ENST00000385245 73 ntBASIC3.15□□□□□ -1.91
CFAP99D6REC4 MIR1283-2-201ENST00000408621 87 ntBASIC3.15□□□□□ -1.91
CFAP99D6REC4 AC093850.1-201ENST00000454121 251 ntBASIC3.15□□□□□ -1.91
CFAP99D6REC4 MIR1270-201ENST00000459320 83 ntBASIC3.15□□□□□ -1.91
CFAP99D6REC4 RN7SL863P-201ENST00000462370 296 ntBASIC3.15□□□□□ -1.91
CFAP99D6REC4 AC006023.1-201ENST00000603944 259 ntBASIC3.15□□□□□ -1.91
CFAP99D6REC4 AC021506.2-201ENST00000612354 169 ntBASIC3.15□□□□□ -1.91
CFAP99D6REC4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CFAP99D6REC4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CFAP99D6REC4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.91
CFAP99D6REC4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CFAP99D6REC4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CFAP99D6REC4 MAPK10-266ENST00000641066 6555 ntBASIC3.14□□□□□ -1.91
CFAP99D6REC4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CFAP99D6REC4 AC093831.2-201ENST00000624393 3427 ntBASIC3.14□□□□□ -1.91
CFAP99D6REC4 SNORA32-201ENST00000384072 121 ntBASIC3.14□□□□□ -1.91
CFAP99D6REC4 RNU6-913P-201ENST00000390913 95 ntBASIC3.14□□□□□ -1.91
CFAP99D6REC4 HMGN2P3-201ENST00000433603 273 ntBASIC3.14□□□□□ -1.91
CFAP99D6REC4 HMGN2P5-201ENST00000436882 273 ntBASIC3.14□□□□□ -1.91
CFAP99D6REC4 snoU13.16-201ENST00000459350 104 ntBASIC3.14□□□□□ -1.91
CFAP99D6REC4 MIR7112-201ENST00000616126 65 ntBASIC3.14□□□□□ -1.91
CFAP99D6REC4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.14□□□□□ -1.91
CFAP99D6REC4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CFAP99D6REC4 AP000648.3-201ENST00000623539 4507 ntBASIC3.13□□□□□ -1.91
CFAP99D6REC4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CFAP99D6REC4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CFAP99D6REC4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CFAP99D6REC4 RNU6-497P-201ENST00000365316 104 ntBASIC3.13□□□□□ -1.91
CFAP99D6REC4 Y_RNA.354-201ENST00000365448 111 ntBASIC3.13□□□□□ -1.91
CFAP99D6REC4 SNORA9-201ENST00000384215 133 ntBASIC3.13□□□□□ -1.91
CFAP99D6REC4 RNU6-813P-201ENST00000384691 107 ntBASIC3.13□□□□□ -1.91
CFAP99D6REC4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CFAP99D6REC4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.13□□□□□ -1.91
CFAP99D6REC4 RNU6-1190P-201ENST00000410811 104 ntBASIC3.13□□□□□ -1.91
CFAP99D6REC4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.13□□□□□ -1.91
CFAP99D6REC4 snoU13.27-201ENST00000459278 104 ntBASIC3.13□□□□□ -1.91
CFAP99D6REC4 RN7SL75P-201ENST00000461926 281 ntBASIC3.13□□□□□ -1.91
CFAP99D6REC4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.13□□□□□ -1.91
CFAP99D6REC4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CFAP99D6REC4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.13□□□□□ -1.91
CFAP99D6REC4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CFAP99D6REC4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CFAP99D6REC4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.12□□□□□ -1.91
CFAP99D6REC4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CFAP99D6REC4 Y_RNA.190-201ENST00000363964 101 ntBASIC3.12□□□□□ -1.91
CFAP99D6REC4 Y_RNA.467-201ENST00000384297 102 ntBASIC3.12□□□□□ -1.91
CFAP99D6REC4 SNORD15B-201ENST00000384714 146 ntBASIC3.12□□□□□ -1.91
CFAP99D6REC4 MIR518A2-201ENST00000384966 87 ntBASIC3.12□□□□□ -1.91
CFAP99D6REC4 SNORD28B-201ENST00000390993 75 ntBASIC3.12□□□□□ -1.91
CFAP99D6REC4 RNU6-402P-201ENST00000410678 103 ntBASIC3.12□□□□□ -1.91
CFAP99D6REC4 RPL23AP83-201ENST00000434984 473 ntBASIC3.12□□□□□ -1.91
CFAP99D6REC4 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.12□□□□□ -1.91
CFAP99D6REC4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.12□□□□□ -1.91
CFAP99D6REC4 RNU7-2P-201ENST00000516096 62 ntBASIC3.12□□□□□ -1.91
CFAP99D6REC4 RNVU1-2-201ENST00000516326 135 ntBASIC3.12□□□□□ -1.91
CFAP99D6REC4 SUB1P4-201ENST00000566062 339 ntBASIC3.12□□□□□ -1.91
CFAP99D6REC4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.12□□□□□ -1.91
CFAP99D6REC4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.12□□□□□ -1.91
CFAP99D6REC4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CFAP99D6REC4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.11□□□□□ -1.91
CFAP99D6REC4 RNA5SP344-201ENST00000411081 104 ntBASIC3.11□□□□□ -1.91
CFAP99D6REC4 RNU1-143P-201ENST00000516296 146 ntBASIC3.11□□□□□ -1.91
CFAP99D6REC4 RNA5SP437-201ENST00000517249 129 ntBASIC3.11□□□□□ -1.91
CFAP99D6REC4 MIR5004-201ENST00000579078 107 ntBASIC3.11□□□□□ -1.91
CFAP99D6REC4 U1.23-201ENST00000610293 146 ntBASIC3.11□□□□□ -1.91
CFAP99D6REC4 RNU1-68P-201ENST00000615382 146 ntBASIC3.11□□□□□ -1.91
CFAP99D6REC4 U1.39-201ENST00000621562 146 ntBASIC3.11□□□□□ -1.91
CFAP99D6REC4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CFAP99D6REC4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CFAP99D6REC4 Y_RNA.73-201ENST00000362910 113 ntBASIC3.1□□□□□ -1.91
CFAP99D6REC4 SNORA7.4-201ENST00000384249 137 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms