Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 AC007336.1-201ENST00000576365 3828 ntBASIC3.03□□□□□ -1.92
USP17L4A6NCW7 MIR4709-201ENST00000577272 72 ntBASIC3.03□□□□□ -1.92
USP17L4A6NCW7 MIR4305-201ENST00000583252 102 ntBASIC3.03□□□□□ -1.92
USP17L4A6NCW7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
USP17L4A6NCW7 MIR302B-201ENST00000362188 73 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 SNORA1.2-201ENST00000365189 134 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 RNU1-51P-201ENST00000365345 176 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 RNU6-106P-201ENST00000384405 107 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 Y_RNA.495-201ENST00000384435 112 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 RNA5SP210-201ENST00000391034 120 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 RN7SKP223-201ENST00000410582 62 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 RNA5SP501-201ENST00000410990 112 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 AC107297.1-201ENST00000459991 176 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 RNU6-998P-201ENST00000515894 101 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 RNA5SP437-201ENST00000517249 129 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 MIR4648-201ENST00000580107 72 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 U1.36-201ENST00000620684 176 ntBASIC3.02□□□□□ -1.93
USP17L4A6NCW7 Y_RNA.549-201ENST00000384657 102 ntBASIC3.01□□□□□ -1.93
USP17L4A6NCW7 RNU6-554P-201ENST00000410466 106 ntBASIC3.01□□□□□ -1.93
USP17L4A6NCW7 AC234781.5-201ENST00000508429 271 ntBASIC3.01□□□□□ -1.93
USP17L4A6NCW7 RNU7-123P-201ENST00000515911 60 ntBASIC3.01□□□□□ -1.93
USP17L4A6NCW7 SCARNA16.3-201ENST00000516595 184 ntBASIC3.01□□□□□ -1.93
USP17L4A6NCW7 MIR4524B-201ENST00000581569 115 ntBASIC3.01□□□□□ -1.93
USP17L4A6NCW7 AC009831.4-201ENST00000620744 325 ntBASIC3.01□□□□□ -1.93
USP17L4A6NCW7 AL513423.1-201ENST00000621695 132 ntBASIC3.01□□□□□ -1.93
USP17L4A6NCW7 AL035470.1-201ENST00000622571 220 ntBASIC3.01□□□□□ -1.93
USP17L4A6NCW7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
USP17L4A6NCW7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
USP17L4A6NCW7 SNORA63.5-201ENST00000363548 123 ntBASIC3□□□□□ -1.93
USP17L4A6NCW7 RNU6-112P-201ENST00000363599 104 ntBASIC3□□□□□ -1.93
USP17L4A6NCW7 RNU4-16P-201ENST00000364737 141 ntBASIC3□□□□□ -1.93
USP17L4A6NCW7 MIR1302-5-201ENST00000408164 150 ntBASIC3□□□□□ -1.93
USP17L4A6NCW7 AL356320.1-201ENST00000429616 163 ntBASIC3□□□□□ -1.93
USP17L4A6NCW7 snoU13.27-201ENST00000459278 104 ntBASIC3□□□□□ -1.93
USP17L4A6NCW7 RNU7-181P-201ENST00000517234 74 ntBASIC3□□□□□ -1.93
USP17L4A6NCW7 IGKV3-31-201ENST00000523109 329 ntBASIC3□□□□□ -1.93
USP17L4A6NCW7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3□□□□□ -1.93
USP17L4A6NCW7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3□□□□□ -1.93
USP17L4A6NCW7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
USP17L4A6NCW7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.99□□□□□ -1.93
USP17L4A6NCW7 Y_RNA.163-201ENST00000363702 113 ntBASIC2.99□□□□□ -1.93
USP17L4A6NCW7 Y_RNA.362-201ENST00000365518 110 ntBASIC2.99□□□□□ -1.93
USP17L4A6NCW7 SNORA70.7-201ENST00000384159 133 ntBASIC2.99□□□□□ -1.93
USP17L4A6NCW7 RNU6-296P-201ENST00000384608 107 ntBASIC2.99□□□□□ -1.93
USP17L4A6NCW7 MIR136-201ENST00000385207 82 ntBASIC2.99□□□□□ -1.93
USP17L4A6NCW7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.99□□□□□ -1.93
USP17L4A6NCW7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.99□□□□□ -1.93
USP17L4A6NCW7 MIR3163-201ENST00000581592 73 ntBASIC2.99□□□□□ -1.93
USP17L4A6NCW7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
USP17L4A6NCW7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
USP17L4A6NCW7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
USP17L4A6NCW7 MIR516B2-201ENST00000385190 85 ntBASIC2.98□□□□□ -1.93
USP17L4A6NCW7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.98□□□□□ -1.93
USP17L4A6NCW7 RNA5SP385-201ENST00000515947 110 ntBASIC2.98□□□□□ -1.93
USP17L4A6NCW7 MIR4769-201ENST00000584126 77 ntBASIC2.98□□□□□ -1.93
USP17L4A6NCW7 MIR4506-201ENST00000584693 77 ntBASIC2.98□□□□□ -1.93
USP17L4A6NCW7 SNORD14A-201ENST00000606526 91 ntBASIC2.98□□□□□ -1.93
USP17L4A6NCW7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.98□□□□□ -1.93
USP17L4A6NCW7 AC021506.2-201ENST00000612354 169 ntBASIC2.98□□□□□ -1.93
USP17L4A6NCW7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.98□□□□□ -1.93
USP17L4A6NCW7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
USP17L4A6NCW7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.98□□□□□ -1.93
USP17L4A6NCW7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.97□□□□□ -1.93
USP17L4A6NCW7 RNA5SP456-201ENST00000364002 114 ntBASIC2.97□□□□□ -1.93
USP17L4A6NCW7 RPL39P34-201ENST00000477141 156 ntBASIC2.97□□□□□ -1.93
USP17L4A6NCW7 Y_RNA.694-201ENST00000516677 117 ntBASIC2.97□□□□□ -1.93
USP17L4A6NCW7 AC046143.2-201ENST00000609789 160 ntBASIC2.97□□□□□ -1.93
USP17L4A6NCW7 AC106754.2-201ENST00000623006 233 ntBASIC2.97□□□□□ -1.93
USP17L4A6NCW7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.97□□□□□ -1.93
USP17L4A6NCW7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
USP17L4A6NCW7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
USP17L4A6NCW7 RNU6-766P-201ENST00000362478 107 ntBASIC2.96□□□□□ -1.94
USP17L4A6NCW7 Y_RNA.323-201ENST00000365157 109 ntBASIC2.96□□□□□ -1.94
USP17L4A6NCW7 RNU6-1014P-201ENST00000383940 103 ntBASIC2.96□□□□□ -1.94
USP17L4A6NCW7 MIR660-201ENST00000385235 97 ntBASIC2.96□□□□□ -1.94
USP17L4A6NCW7 SNORD88.1-201ENST00000408684 91 ntBASIC2.96□□□□□ -1.94
USP17L4A6NCW7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.96□□□□□ -1.94
USP17L4A6NCW7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.96□□□□□ -1.94
USP17L4A6NCW7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
USP17L4A6NCW7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
USP17L4A6NCW7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
USP17L4A6NCW7 RNU6-756P-201ENST00000383997 107 ntBASIC2.95□□□□□ -1.94
USP17L4A6NCW7 PGBD4P5-201ENST00000445958 426 ntBASIC2.95□□□□□ -1.94
USP17L4A6NCW7 RNU2-11P-201ENST00000459191 187 ntBASIC2.95□□□□□ -1.94
USP17L4A6NCW7 Y_RNA.677-201ENST00000516401 85 ntBASIC2.95□□□□□ -1.94
USP17L4A6NCW7 RNU2-35P-201ENST00000516446 142 ntBASIC2.95□□□□□ -1.94
USP17L4A6NCW7 RNA5SP281-201ENST00000516504 135 ntBASIC2.95□□□□□ -1.94
USP17L4A6NCW7 RNU6-537P-201ENST00000517277 103 ntBASIC2.95□□□□□ -1.94
USP17L4A6NCW7 MIR1273D-201ENST00000577266 86 ntBASIC2.95□□□□□ -1.94
USP17L4A6NCW7 MIR4529-201ENST00000578110 78 ntBASIC2.95□□□□□ -1.94
USP17L4A6NCW7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.95□□□□□ -1.94
USP17L4A6NCW7 HSPE1P19-201ENST00000603327 295 ntBASIC2.95□□□□□ -1.94
USP17L4A6NCW7 AC103810.6-201ENST00000606708 136 ntBASIC2.95□□□□□ -1.94
USP17L4A6NCW7 RNU6-94P-201ENST00000607728 107 ntBASIC2.95□□□□□ -1.94
USP17L4A6NCW7 AC021613.1-201ENST00000623880 111 ntBASIC2.95□□□□□ -1.94
USP17L4A6NCW7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
USP17L4A6NCW7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
USP17L4A6NCW7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.94□□□□□ -1.94
USP17L4A6NCW7 RNU6-1255P-201ENST00000363434 112 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms