Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 AC092881.1-201ENST00000638218 2733 ntBASIC3.28□□□□□ -1.88
DNMT3AQ9Y6K1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
DNMT3AQ9Y6K1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
DNMT3AQ9Y6K1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.28□□□□□ -1.88
DNMT3AQ9Y6K1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.27□□□□□ -1.89
DNMT3AQ9Y6K1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DNMT3AQ9Y6K1 AP006437.1-201ENST00000641440 3685 ntBASIC3.27□□□□□ -1.89
DNMT3AQ9Y6K1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DNMT3AQ9Y6K1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.27□□□□□ -1.89
DNMT3AQ9Y6K1 MIR29C-201ENST00000385231 88 ntBASIC3.27□□□□□ -1.89
DNMT3AQ9Y6K1 RNU6-1307P-201ENST00000391012 103 ntBASIC3.27□□□□□ -1.89
DNMT3AQ9Y6K1 AC114811.1-201ENST00000507207 168 ntBASIC3.27□□□□□ -1.89
DNMT3AQ9Y6K1 RNU6-1108P-201ENST00000516308 104 ntBASIC3.27□□□□□ -1.89
DNMT3AQ9Y6K1 RNA5SP33-201ENST00000516687 98 ntBASIC3.27□□□□□ -1.89
DNMT3AQ9Y6K1 AC093010.3-201ENST00000570269 15214 ntBASIC3.27□□□□□ -1.89
DNMT3AQ9Y6K1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.27□□□□□ -1.89
DNMT3AQ9Y6K1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 SNORA63.2-201ENST00000362603 126 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 RNU6-23P-201ENST00000363283 107 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 RNA5SP493-201ENST00000364115 91 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 SNORD46.1-201ENST00000364139 104 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 RNU6-442P-201ENST00000383968 104 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 MIR633-201ENST00000384821 98 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 RNU6-663P-201ENST00000391105 106 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 SNORA11.4-201ENST00000408823 129 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 RNU6-519P-201ENST00000410590 108 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 SPINT5P-201ENST00000448174 155 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 AL109933.2-201ENST00000452651 260 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 snoU13.11-201ENST00000459219 104 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 AC005520.4-201ENST00000604337 90 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 uc_338.1-201ENST00000612113 180 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 MIR7153-201ENST00000637758 57 ntBASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
DNMT3AQ9Y6K1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 SNORA70.4-201ENST00000365509 134 ntBASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 SNORA32-201ENST00000384072 121 ntBASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 RNVU1-14-201ENST00000384770 164 ntBASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 MIR635-201ENST00000384830 98 ntBASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 Y_RNA.596-201ENST00000410462 109 ntBASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 RNA5SP120-201ENST00000410900 112 ntBASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 RPS29P28-201ENST00000446439 141 ntBASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 AL049830.1-201ENST00000468034 425 ntBASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 MIR4762-201ENST00000585261 75 ntBASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
DNMT3AQ9Y6K1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 SNORA1B-201ENST00000362535 133 ntBASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 SNORD115-14-201ENST00000363090 81 ntBASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 SNORD115-31-201ENST00000365318 82 ntBASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 RNU4-47P-201ENST00000410876 114 ntBASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 AC005326.1-201ENST00000429197 123 ntBASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 MIR2276-201ENST00000516886 89 ntBASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
DNMT3AQ9Y6K1 AC008264.2-201ENST00000610193 3731 ntBASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 AC245060.5-201ENST00000610778 3293 ntBASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 MIR30E-201ENST00000362104 92 ntBASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 RNU6-862P-201ENST00000362804 105 ntBASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 SNORD115-2-201ENST00000362842 82 ntBASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 SNORD14E-201ENST00000364009 85 ntBASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 SNORD115-20-201ENST00000365099 82 ntBASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 MIR181B2-201ENST00000385004 89 ntBASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 MIR548G-201ENST00000408442 89 ntBASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 AC079150.2-201ENST00000443733 78 ntBASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 AC087499.4-201ENST00000448505 178 ntBASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 RNU7-156P-201ENST00000517214 74 ntBASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 MIR3169-201ENST00000578032 83 ntBASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
DNMT3AQ9Y6K1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
DNMT3AQ9Y6K1 RNU6-525P-201ENST00000363685 104 ntBASIC3.22□□□□□ -1.89
DNMT3AQ9Y6K1 AL163195.1-201ENST00000496941 348 ntBASIC3.22□□□□□ -1.89
DNMT3AQ9Y6K1 RNU6-998P-201ENST00000515894 101 ntBASIC3.22□□□□□ -1.89
DNMT3AQ9Y6K1 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.22□□□□□ -1.89
DNMT3AQ9Y6K1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.22□□□□□ -1.89
DNMT3AQ9Y6K1 MIR3126-201ENST00000577443 74 ntBASIC3.22□□□□□ -1.89
DNMT3AQ9Y6K1 AC007179.3-201ENST00000604976 235 ntBASIC3.22□□□□□ -1.89
DNMT3AQ9Y6K1 AC103810.6-201ENST00000606708 136 ntBASIC3.22□□□□□ -1.89
DNMT3AQ9Y6K1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
DNMT3AQ9Y6K1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.22□□□□□ -1.89
DNMT3AQ9Y6K1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
DNMT3AQ9Y6K1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.21□□□□□ -1.89
DNMT3AQ9Y6K1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms