Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.86□□□□□ -2.71
AP4S1Q9Y587 RNU6-413P-201ENST00000384115 107 ntBASIC-1.86□□□□□ -2.71
AP4S1Q9Y587 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.86□□□□□ -2.71
AP4S1Q9Y587 MRPL42P2-201ENST00000403169 426 ntBASIC-1.86□□□□□ -2.71
AP4S1Q9Y587 RNU7-25P-201ENST00000516544 62 ntBASIC-1.86□□□□□ -2.71
AP4S1Q9Y587 MIR4703-201ENST00000577728 79 ntBASIC-1.86□□□□□ -2.71
AP4S1Q9Y587 MIR410-201ENST00000362222 80 ntBASIC-1.87□□□□□ -2.71
AP4S1Q9Y587 SNORD74.6-201ENST00000364796 70 ntBASIC-1.87□□□□□ -2.71
AP4S1Q9Y587 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.87□□□□□ -2.71
AP4S1Q9Y587 RNU6-949P-201ENST00000384040 107 ntBASIC-1.87□□□□□ -2.71
AP4S1Q9Y587 RNU6-533P-201ENST00000384144 107 ntBASIC-1.87□□□□□ -2.71
AP4S1Q9Y587 MTND1P11-201ENST00000456661 876 ntBASIC-1.87□□□□□ -2.71
AP4S1Q9Y587 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.87□□□□□ -2.71
AP4S1Q9Y587 MIR3920-201ENST00000581751 86 ntBASIC-1.87□□□□□ -2.71
AP4S1Q9Y587 AC069503.3-201ENST00000618674 145 ntBASIC-1.87□□□□□ -2.71
AP4S1Q9Y587 AC091931.1-201ENST00000623488 728 ntBASIC-1.87□□□□□ -2.71
AP4S1Q9Y587 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.88□□□□□ -2.71
AP4S1Q9Y587 RNU6-606P-201ENST00000384721 111 ntBASIC-1.88□□□□□ -2.71
AP4S1Q9Y587 MIR626-201ENST00000385032 94 ntBASIC-1.88□□□□□ -2.71
AP4S1Q9Y587 SNORA49-201ENST00000386157 136 ntBASIC-1.88□□□□□ -2.71
AP4S1Q9Y587 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.88□□□□□ -2.71
AP4S1Q9Y587 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.88□□□□□ -2.71
AP4S1Q9Y587 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.88□□□□□ -2.71
AP4S1Q9Y587 RNA5SP67-201ENST00000516422 131 ntBASIC-1.88□□□□□ -2.71
AP4S1Q9Y587 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.88□□□□□ -2.71
AP4S1Q9Y587 RNY1P12-201ENST00000364251 105 ntBASIC-1.89□□□□□ -2.71
AP4S1Q9Y587 RNU6-973P-201ENST00000364690 107 ntBASIC-1.89□□□□□ -2.71
AP4S1Q9Y587 RNU6-281P-201ENST00000384212 103 ntBASIC-1.89□□□□□ -2.71
AP4S1Q9Y587 RNU6-74P-201ENST00000384235 107 ntBASIC-1.89□□□□□ -2.71
AP4S1Q9Y587 RPS27AP14-201ENST00000422868 454 ntBASIC-1.89□□□□□ -2.71
AP4S1Q9Y587 FCF1P4-201ENST00000448326 183 ntBASIC-1.89□□□□□ -2.71
AP4S1Q9Y587 SERF1AP1-201ENST00000514575 187 ntBASIC-1.89□□□□□ -2.71
AP4S1Q9Y587 AC138207.3-201ENST00000585289 166 ntBASIC-1.89□□□□□ -2.71
AP4S1Q9Y587 AC005771.1-201ENST00000585581 349 ntBASIC-1.89□□□□□ -2.71
AP4S1Q9Y587 SEPT14P19-203ENST00000633205 211 ntBASIC-1.89□□□□□ -2.71
AP4S1Q9Y587 RNU6-905P-201ENST00000384434 107 ntBASIC-1.9□□□□□ -2.71
AP4S1Q9Y587 RNU6-456P-201ENST00000384493 107 ntBASIC-1.9□□□□□ -2.71
AP4S1Q9Y587 USMG5P1-201ENST00000425964 177 ntBASIC-1.9□□□□□ -2.71
AP4S1Q9Y587 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.9□□□□□ -2.71
AP4S1Q9Y587 AC016550.1-201ENST00000505348 785 ntBASIC-1.9□□□□□ -2.71
AP4S1Q9Y587 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.9□□□□□ -2.71
AP4S1Q9Y587 SNORD27.1-201ENST00000516319 72 ntBASIC-1.9□□□□□ -2.71
AP4S1Q9Y587 AP003733.2-201ENST00000529409 171 ntBASIC-1.9□□□□□ -2.71
AP4S1Q9Y587 AC022441.3-201ENST00000605737 136 ntBASIC-1.9□□□□□ -2.71
AP4S1Q9Y587 MIR6854-201ENST00000614935 69 ntBASIC-1.9□□□□□ -2.71
AP4S1Q9Y587 RNU4-58P-201ENST00000363192 141 ntBASIC-1.91□□□□□ -2.72
AP4S1Q9Y587 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.91□□□□□ -2.72
AP4S1Q9Y587 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.91□□□□□ -2.72
AP4S1Q9Y587 SNORD116.1-201ENST00000365628 92 ntBASIC-1.91□□□□□ -2.72
AP4S1Q9Y587 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.91□□□□□ -2.72
AP4S1Q9Y587 RNU6-831P-201ENST00000384548 107 ntBASIC-1.91□□□□□ -2.72
AP4S1Q9Y587 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.91□□□□□ -2.72
AP4S1Q9Y587 RPS29P24-201ENST00000486345 171 ntBASIC-1.91□□□□□ -2.72
AP4S1Q9Y587 U4.1-201ENST00000620349 87 ntBASIC-1.91□□□□□ -2.72
AP4S1Q9Y587 SNORD115-25-201ENST00000362619 82 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 SNORD115-30-201ENST00000364117 82 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 SNORA69-201ENST00000383895 132 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 SNORA26.6-201ENST00000391256 115 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 MIR548I3-201ENST00000408378 149 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 AC098614.3-201ENST00000438957 440 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 SNORA40.17-201ENST00000517256 115 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 AC026421.1-201ENST00000519101 163 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 AL137161.1-201ENST00000532231 390 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 MIR5583-1-201ENST00000580941 59 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 AC092807.2-201ENST00000609367 243 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 U2.17-201ENST00000611454 95 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 JPX_2.1-201ENST00000614161 69 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 AL158063.1-201ENST00000615349 536 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 AL121895.2-201ENST00000619558 447 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 AC132825.6-201ENST00000638861 357 ntBASIC-1.92□□□□□ -2.72
AP4S1Q9Y587 MIR20A-201ENST00000362279 71 ntBASIC-1.93□□□□□ -2.72
AP4S1Q9Y587 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.93□□□□□ -2.72
AP4S1Q9Y587 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.93□□□□□ -2.72
AP4S1Q9Y587 SNORA40.5-201ENST00000391061 128 ntBASIC-1.93□□□□□ -2.72
AP4S1Q9Y587 RNU2-9P-201ENST00000410194 145 ntBASIC-1.93□□□□□ -2.72
AP4S1Q9Y587 RNU6-938P-201ENST00000411285 103 ntBASIC-1.93□□□□□ -2.72
AP4S1Q9Y587 HLA-S-202ENST00000425174 53 ntBASIC-1.93□□□□□ -2.72
AP4S1Q9Y587 AC104850.1-201ENST00000435940 476 ntBASIC-1.93□□□□□ -2.72
AP4S1Q9Y587 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.93□□□□□ -2.72
AP4S1Q9Y587 AC093423.1-201ENST00000440817 142 ntBASIC-1.93□□□□□ -2.72
AP4S1Q9Y587 MTND2P3-201ENST00000452458 470 ntBASIC-1.93□□□□□ -2.72
AP4S1Q9Y587 AL133215.3-201ENST00000609801 448 ntBASIC-1.93□□□□□ -2.72
AP4S1Q9Y587 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.94□□□□□ -2.72
AP4S1Q9Y587 SNORA27-201ENST00000384323 126 ntBASIC-1.94□□□□□ -2.72
AP4S1Q9Y587 RNU6-601P-201ENST00000384540 107 ntBASIC-1.94□□□□□ -2.72
AP4S1Q9Y587 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
AP4S1Q9Y587 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.94□□□□□ -2.72
AP4S1Q9Y587 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.94□□□□□ -2.72
AP4S1Q9Y587 AC245014.2-201ENST00000603689 287 ntBASIC-1.94□□□□□ -2.72
AP4S1Q9Y587 MIR6717-201ENST00000622747 73 ntBASIC-1.94□□□□□ -2.72
AP4S1Q9Y587 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.95□□□□□ -2.72
AP4S1Q9Y587 MIR548O-201ENST00000408583 114 ntBASIC-1.95□□□□□ -2.72
AP4S1Q9Y587 AL353813.1-201ENST00000440700 253 ntBASIC-1.95□□□□□ -2.72
AP4S1Q9Y587 MTND1P27-201ENST00000451117 902 ntBASIC-1.95□□□□□ -2.72
AP4S1Q9Y587 RNU6-479P-201ENST00000516348 105 ntBASIC-1.95□□□□□ -2.72
AP4S1Q9Y587 RNU6-410P-201ENST00000517006 107 ntBASIC-1.95□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms