Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 SNORD77.2-201ENST00000391045 68 ntBASIC4.23□□□□□ -1.73
TRIM35Q9UPQ4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM35Q9UPQ4 Y_RNA.264-201ENST00000364665 102 ntBASIC4.22□□□□□ -1.73
TRIM35Q9UPQ4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM35Q9UPQ4 RNU7-79P-201ENST00000516082 62 ntBASIC4.22□□□□□ -1.73
TRIM35Q9UPQ4 MIR5004-201ENST00000579078 107 ntBASIC4.22□□□□□ -1.73
TRIM35Q9UPQ4 AC005520.4-201ENST00000604337 90 ntBASIC4.22□□□□□ -1.73
TRIM35Q9UPQ4 SNORA28-201ENST00000606769 126 ntBASIC4.22□□□□□ -1.73
TRIM35Q9UPQ4 MIR5739-201ENST00000619803 80 ntBASIC4.22□□□□□ -1.73
TRIM35Q9UPQ4 AC007336.1-201ENST00000576365 3828 ntBASIC4.21□□□□□ -1.73
TRIM35Q9UPQ4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM35Q9UPQ4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM35Q9UPQ4 HSBP1P2-201ENST00000299671 229 ntBASIC4.21□□□□□ -1.74
TRIM35Q9UPQ4 MIR95-201ENST00000385072 81 ntBASIC4.21□□□□□ -1.74
TRIM35Q9UPQ4 MIR154-201ENST00000385243 84 ntBASIC4.21□□□□□ -1.74
TRIM35Q9UPQ4 RNU6-303P-201ENST00000517091 106 ntBASIC4.21□□□□□ -1.74
TRIM35Q9UPQ4 RNU7-156P-201ENST00000517214 74 ntBASIC4.21□□□□□ -1.74
TRIM35Q9UPQ4 AL161756.2-201ENST00000604597 246 ntBASIC4.21□□□□□ -1.74
TRIM35Q9UPQ4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM35Q9UPQ4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM35Q9UPQ4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM35Q9UPQ4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM35Q9UPQ4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM35Q9UPQ4 RNU4-82P-201ENST00000362443 140 ntBASIC4.2□□□□□ -1.74
TRIM35Q9UPQ4 AC074348.1-201ENST00000426503 132 ntBASIC4.2□□□□□ -1.74
TRIM35Q9UPQ4 RNU1-143P-201ENST00000516296 146 ntBASIC4.2□□□□□ -1.74
TRIM35Q9UPQ4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.2□□□□□ -1.74
TRIM35Q9UPQ4 U1.23-201ENST00000610293 146 ntBASIC4.2□□□□□ -1.74
TRIM35Q9UPQ4 RNU1-68P-201ENST00000615382 146 ntBASIC4.2□□□□□ -1.74
TRIM35Q9UPQ4 U1.39-201ENST00000621562 146 ntBASIC4.2□□□□□ -1.74
TRIM35Q9UPQ4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM35Q9UPQ4 RNA5SP374-201ENST00000362939 125 ntBASIC4.19□□□□□ -1.74
TRIM35Q9UPQ4 SNORD115-31-201ENST00000365318 82 ntBASIC4.19□□□□□ -1.74
TRIM35Q9UPQ4 AC244636.1-201ENST00000421152 228 ntBASIC4.19□□□□□ -1.74
TRIM35Q9UPQ4 MIR3200-201ENST00000580767 85 ntBASIC4.19□□□□□ -1.74
TRIM35Q9UPQ4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM35Q9UPQ4 AC110741.2-201ENST00000605278 268 ntBASIC4.19□□□□□ -1.74
TRIM35Q9UPQ4 AC005000.2-201ENST00000605468 310 ntBASIC4.19□□□□□ -1.74
TRIM35Q9UPQ4 NEAT1_2.1-201ENST00000620525 105 ntBASIC4.19□□□□□ -1.74
TRIM35Q9UPQ4 MIR8057-201ENST00000620957 69 ntBASIC4.19□□□□□ -1.74
TRIM35Q9UPQ4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC4.19□□□□□ -1.74
TRIM35Q9UPQ4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM35Q9UPQ4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 RNU6-811P-201ENST00000384069 107 ntBASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 MIR3074-201ENST00000384885 81 ntBASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 RNU6-205P-201ENST00000390858 107 ntBASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 FO393413.1-201ENST00000402892 195 ntBASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 RNU4-47P-201ENST00000410876 114 ntBASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 HMGN1P33-201ENST00000432945 451 ntBASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 CYP2C59P-201ENST00000457790 269 ntBASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 SNORA48.11-201ENST00000517015 89 ntBASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 SCARNA11.3-201ENST00000517276 130 ntBASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 AC104027.1-201ENST00000521887 300 ntBASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 MIR5195-201ENST00000583555 115 ntBASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 AC243994.1-201ENST00000618627 109 ntBASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 AL021368.2-201ENST00000606125 5352 ntBASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM35Q9UPQ4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM35Q9UPQ4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM35Q9UPQ4 RNU6-833P-201ENST00000363486 107 ntBASIC4.17□□□□□ -1.74
TRIM35Q9UPQ4 SNORD114-6-201ENST00000364393 72 ntBASIC4.17□□□□□ -1.74
TRIM35Q9UPQ4 SNORA7.4-201ENST00000384249 137 ntBASIC4.17□□□□□ -1.74
TRIM35Q9UPQ4 RNU6-614P-201ENST00000384369 107 ntBASIC4.17□□□□□ -1.74
TRIM35Q9UPQ4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM35Q9UPQ4 MICF-203ENST00000432679 129 ntBASIC4.17□□□□□ -1.74
TRIM35Q9UPQ4 Y_RNA.648-201ENST00000459455 110 ntBASIC4.17□□□□□ -1.74
TRIM35Q9UPQ4 CKS1BP2-201ENST00000497342 240 ntBASIC4.17□□□□□ -1.74
TRIM35Q9UPQ4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM35Q9UPQ4 U6.59-201ENST00000615686 107 ntBASIC4.17□□□□□ -1.74
TRIM35Q9UPQ4 U7.8-201ENST00000619968 63 ntBASIC4.17□□□□□ -1.74
TRIM35Q9UPQ4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM35Q9UPQ4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM35Q9UPQ4 RNU6-862P-201ENST00000362804 105 ntBASIC4.16□□□□□ -1.74
TRIM35Q9UPQ4 RNA5SP292-201ENST00000390974 118 ntBASIC4.16□□□□□ -1.74
TRIM35Q9UPQ4 RNA5SP109-201ENST00000391010 116 ntBASIC4.16□□□□□ -1.74
TRIM35Q9UPQ4 RN7SL863P-201ENST00000462370 296 ntBASIC4.16□□□□□ -1.74
TRIM35Q9UPQ4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.16□□□□□ -1.74
TRIM35Q9UPQ4 UBL5P2-201ENST00000583788 219 ntBASIC4.16□□□□□ -1.74
TRIM35Q9UPQ4 MIR8054-201ENST00000620877 86 ntBASIC4.16□□□□□ -1.74
TRIM35Q9UPQ4 AC006111.3-201ENST00000622137 383 ntBASIC4.16□□□□□ -1.74
TRIM35Q9UPQ4 AC073476.4-201ENST00000628409 72 ntBASIC4.16□□□□□ -1.74
TRIM35Q9UPQ4 AC245060.5-201ENST00000610778 3293 ntBASIC4.15□□□□□ -1.74
TRIM35Q9UPQ4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
TRIM35Q9UPQ4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM35Q9UPQ4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
TRIM35Q9UPQ4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
TRIM35Q9UPQ4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.15□□□□□ -1.74
TRIM35Q9UPQ4 SNORA54-201ENST00000384281 123 ntBASIC4.15□□□□□ -1.75
TRIM35Q9UPQ4 MIR218-1-201ENST00000384999 110 ntBASIC4.15□□□□□ -1.75
TRIM35Q9UPQ4 AL138878.1-201ENST00000405131 347 ntBASIC4.15□□□□□ -1.75
TRIM35Q9UPQ4 MIR1262-201ENST00000408276 93 ntBASIC4.15□□□□□ -1.75
TRIM35Q9UPQ4 AL031183.1-201ENST00000457667 207 ntBASIC4.15□□□□□ -1.75
TRIM35Q9UPQ4 MIR8065-201ENST00000620577 100 ntBASIC4.15□□□□□ -1.75
TRIM35Q9UPQ4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
TRIM35Q9UPQ4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM35Q9UPQ4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
TRIM35Q9UPQ4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
TRIM35Q9UPQ4 RNU6-208P-201ENST00000362431 107 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms