Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PHF8Q9UPP1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.21□□□□□ -1.74
PHF8Q9UPP1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
PHF8Q9UPP1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PHF8Q9UPP1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PHF8Q9UPP1 AC062016.1-201ENST00000355719 319 ntBASIC4.2□□□□□ -1.74
PHF8Q9UPP1 SNORA26.7-201ENST00000391288 122 ntBASIC4.2□□□□□ -1.74
PHF8Q9UPP1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC4.2□□□□□ -1.74
PHF8Q9UPP1 STAG3L5P-204ENST00000443759 179 ntBASIC4.2□□□□□ -1.74
PHF8Q9UPP1 AC018868.1-201ENST00000491307 315 ntBASIC4.2□□□□□ -1.74
PHF8Q9UPP1 RNU7-181P-201ENST00000517234 74 ntBASIC4.2□□□□□ -1.74
PHF8Q9UPP1 DNAJC19P9-201ENST00000555084 351 ntBASIC4.2□□□□□ -1.74
PHF8Q9UPP1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.2□□□□□ -1.74
PHF8Q9UPP1 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.2□□□□□ -1.74
PHF8Q9UPP1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PHF8Q9UPP1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PHF8Q9UPP1 RNA5SP184-201ENST00000411071 108 ntBASIC4.19□□□□□ -1.74
PHF8Q9UPP1 AL606517.2-201ENST00000442855 241 ntBASIC4.19□□□□□ -1.74
PHF8Q9UPP1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.19□□□□□ -1.74
PHF8Q9UPP1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PHF8Q9UPP1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC4.19□□□□□ -1.74
PHF8Q9UPP1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PHF8Q9UPP1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PHF8Q9UPP1 MIRLET7C-201ENST00000362160 84 ntBASIC4.18□□□□□ -1.74
PHF8Q9UPP1 RNU4-82P-201ENST00000362443 140 ntBASIC4.18□□□□□ -1.74
PHF8Q9UPP1 Y_RNA.140-201ENST00000363474 103 ntBASIC4.18□□□□□ -1.74
PHF8Q9UPP1 SNORD38.1-201ENST00000363863 68 ntBASIC4.18□□□□□ -1.74
PHF8Q9UPP1 MIR591-201ENST00000385290 95 ntBASIC4.18□□□□□ -1.74
PHF8Q9UPP1 Y_RNA.609-201ENST00000410669 89 ntBASIC4.18□□□□□ -1.74
PHF8Q9UPP1 AL445685.2-201ENST00000422551 342 ntBASIC4.18□□□□□ -1.74
PHF8Q9UPP1 RNU6-1116P-201ENST00000517269 99 ntBASIC4.18□□□□□ -1.74
PHF8Q9UPP1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC4.18□□□□□ -1.74
PHF8Q9UPP1 RNU6-86P-201ENST00000606534 107 ntBASIC4.18□□□□□ -1.74
PHF8Q9UPP1 AC103810.6-201ENST00000606708 136 ntBASIC4.18□□□□□ -1.74
PHF8Q9UPP1 AC244205.2-202ENST00000635781 342 ntBASIC4.18□□□□□ -1.74
PHF8Q9UPP1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PHF8Q9UPP1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PHF8Q9UPP1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PHF8Q9UPP1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PHF8Q9UPP1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC4.17□□□□□ -1.74
PHF8Q9UPP1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PHF8Q9UPP1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PHF8Q9UPP1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PHF8Q9UPP1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PHF8Q9UPP1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PHF8Q9UPP1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
PHF8Q9UPP1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PHF8Q9UPP1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PHF8Q9UPP1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PHF8Q9UPP1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PHF8Q9UPP1 AC073325.2-201ENST00000339545 159 ntBASIC4.16□□□□□ -1.74
PHF8Q9UPP1 RNU6-1163P-201ENST00000364516 107 ntBASIC4.16□□□□□ -1.74
PHF8Q9UPP1 RNU6-1072P-201ENST00000384703 107 ntBASIC4.16□□□□□ -1.74
PHF8Q9UPP1 RNU6-443P-201ENST00000384780 107 ntBASIC4.16□□□□□ -1.74
PHF8Q9UPP1 SNORA11.4-201ENST00000408823 129 ntBASIC4.16□□□□□ -1.74
PHF8Q9UPP1 RN7SKP192-201ENST00000411291 327 ntBASIC4.16□□□□□ -1.74
PHF8Q9UPP1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC4.16□□□□□ -1.74
PHF8Q9UPP1 RPS12P2-201ENST00000439728 269 ntBASIC4.16□□□□□ -1.74
PHF8Q9UPP1 RNU7-34P-201ENST00000459394 64 ntBASIC4.16□□□□□ -1.74
PHF8Q9UPP1 MIR8054-201ENST00000620877 86 ntBASIC4.16□□□□□ -1.74
PHF8Q9UPP1 SNORD3E-202ENST00000627253 216 ntBASIC4.16□□□□□ -1.74
PHF8Q9UPP1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PHF8Q9UPP1 MAPK10-322ENST00000641485 4530 ntBASIC4.16□□□□□ -1.74
PHF8Q9UPP1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.16□□□□□ -1.74
PHF8Q9UPP1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PHF8Q9UPP1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PHF8Q9UPP1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.15□□□□□ -1.75
PHF8Q9UPP1 SNORA25B-201ENST00000365507 128 ntBASIC4.15□□□□□ -1.75
PHF8Q9UPP1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PHF8Q9UPP1 SNORA26.6-201ENST00000391256 115 ntBASIC4.15□□□□□ -1.75
PHF8Q9UPP1 MIR889-201ENST00000401280 79 ntBASIC4.15□□□□□ -1.75
PHF8Q9UPP1 AL161932.1-201ENST00000437408 146 ntBASIC4.15□□□□□ -1.75
PHF8Q9UPP1 RNU7-2P-201ENST00000516096 62 ntBASIC4.15□□□□□ -1.75
PHF8Q9UPP1 MIR4712-201ENST00000583750 82 ntBASIC4.15□□□□□ -1.75
PHF8Q9UPP1 AC104984.5-201ENST00000586878 94 ntBASIC4.15□□□□□ -1.75
PHF8Q9UPP1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PHF8Q9UPP1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PHF8Q9UPP1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PHF8Q9UPP1 RNU6-833P-201ENST00000363486 107 ntBASIC4.14□□□□□ -1.75
PHF8Q9UPP1 RNA5SP109-201ENST00000391010 116 ntBASIC4.14□□□□□ -1.75
PHF8Q9UPP1 Y_RNA.247-201ENST00000364500 92 ntBASIC4.13□□□□□ -1.75
PHF8Q9UPP1 Y_RNA.370-201ENST00000365589 108 ntBASIC4.13□□□□□ -1.75
PHF8Q9UPP1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.13□□□□□ -1.75
PHF8Q9UPP1 RNU7-67P-201ENST00000459003 62 ntBASIC4.13□□□□□ -1.75
PHF8Q9UPP1 UBL5P1-201ENST00000507979 193 ntBASIC4.13□□□□□ -1.75
PHF8Q9UPP1 MIR6715A-201ENST00000615929 79 ntBASIC4.13□□□□□ -1.75
PHF8Q9UPP1 MIR6717-201ENST00000622747 73 ntBASIC4.13□□□□□ -1.75
PHF8Q9UPP1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.13□□□□□ -1.75
PHF8Q9UPP1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PHF8Q9UPP1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PHF8Q9UPP1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PHF8Q9UPP1 MIR30E-201ENST00000362104 92 ntBASIC4.12□□□□□ -1.75
PHF8Q9UPP1 SNORA32-201ENST00000384072 121 ntBASIC4.12□□□□□ -1.75
PHF8Q9UPP1 RPS29P29-201ENST00000456396 171 ntBASIC4.12□□□□□ -1.75
PHF8Q9UPP1 RNU6-958P-201ENST00000516995 106 ntBASIC4.12□□□□□ -1.75
PHF8Q9UPP1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC4.12□□□□□ -1.75
PHF8Q9UPP1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PHF8Q9UPP1 AC245060.5-201ENST00000610778 3293 ntBASIC4.11□□□□□ -1.75
PHF8Q9UPP1 RNA5SP432-201ENST00000362480 116 ntBASIC4.11□□□□□ -1.75
PHF8Q9UPP1 RNU6-457P-201ENST00000363999 107 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms