Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 SNORD77.4-201ENST00000516158 81 ntBASIC1.56□□□□□ -2.16
SIX4Q9UIU6 AC109810.1-201ENST00000534066 224 ntBASIC1.56□□□□□ -2.16
SIX4Q9UIU6 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
SIX4Q9UIU6 AC120024.3-201ENST00000603167 156 ntBASIC1.56□□□□□ -2.16
SIX4Q9UIU6 RNU6-275P-201ENST00000364910 107 ntBASIC1.55□□□□□ -2.16
SIX4Q9UIU6 RNU6-1228P-201ENST00000391014 107 ntBASIC1.55□□□□□ -2.16
SIX4Q9UIU6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.55□□□□□ -2.16
SIX4Q9UIU6 PGBD4P5-201ENST00000445958 426 ntBASIC1.55□□□□□ -2.16
SIX4Q9UIU6 AC114811.1-201ENST00000507207 168 ntBASIC1.55□□□□□ -2.16
SIX4Q9UIU6 RNA5SP458-201ENST00000516188 119 ntBASIC1.55□□□□□ -2.16
SIX4Q9UIU6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.55□□□□□ -2.16
SIX4Q9UIU6 AC103810.8-201ENST00000607347 118 ntBASIC1.55□□□□□ -2.16
SIX4Q9UIU6 AC098479.1-201ENST00000609225 154 ntBASIC1.55□□□□□ -2.16
SIX4Q9UIU6 Y_RNA.75-201ENST00000362927 97 ntBASIC1.54□□□□□ -2.16
SIX4Q9UIU6 SNORD45.3-201ENST00000363836 72 ntBASIC1.54□□□□□ -2.16
SIX4Q9UIU6 RNU6-484P-201ENST00000384016 107 ntBASIC1.54□□□□□ -2.16
SIX4Q9UIU6 RNY3P5-201ENST00000384127 102 ntBASIC1.54□□□□□ -2.16
SIX4Q9UIU6 RNU6-163P-201ENST00000384396 106 ntBASIC1.54□□□□□ -2.16
SIX4Q9UIU6 MIR15B-201ENST00000385045 98 ntBASIC1.54□□□□□ -2.16
SIX4Q9UIU6 PCNPP3-201ENST00000393579 471 ntBASIC1.54□□□□□ -2.16
SIX4Q9UIU6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.54□□□□□ -2.16
SIX4Q9UIU6 AC023449.1-201ENST00000454464 154 ntBASIC1.54□□□□□ -2.16
SIX4Q9UIU6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.54□□□□□ -2.16
SIX4Q9UIU6 SNORD45.4-201ENST00000516629 73 ntBASIC1.54□□□□□ -2.16
SIX4Q9UIU6 MIR4778-201ENST00000577635 80 ntBASIC1.54□□□□□ -2.16
SIX4Q9UIU6 AL513423.1-201ENST00000621695 132 ntBASIC1.54□□□□□ -2.16
SIX4Q9UIU6 RNU6-1084P-201ENST00000362498 107 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 RNU6-414P-201ENST00000363705 104 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 Y_RNA.240-201ENST00000364469 95 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 snoU2-30.1-201ENST00000365012 70 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 RNU6-1138P-201ENST00000365359 106 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 MIR194-1-201ENST00000384892 85 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 MIR660-201ENST00000385235 97 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 RNU5E-9P-201ENST00000411164 104 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 AL161935.2-201ENST00000414627 60 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 AL121914.1-201ENST00000450188 156 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 SNRPGP8-201ENST00000454064 226 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 AC093850.1-201ENST00000454121 251 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 CYCTP-201ENST00000504253 315 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 Y_RNA.714-201ENST00000517065 90 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.53□□□□□ -2.16
SIX4Q9UIU6 MRPS18CP4-201ENST00000535821 231 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 AC087685.1-201ENST00000587507 141 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 Pinc.1-201ENST00000616452 154 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.53□□□□□ -2.16
SIX4Q9UIU6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.53□□□□□ -2.16
SIX4Q9UIU6 ICE2P2-201ENST00000483823 2787 ntBASIC1.53□□□□□ -2.17
SIX4Q9UIU6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.52□□□□□ -2.17
SIX4Q9UIU6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SIX4Q9UIU6 MIR424-201ENST00000362227 98 ntBASIC1.52□□□□□ -2.17
SIX4Q9UIU6 Y_RNA.91-201ENST00000363042 107 ntBASIC1.52□□□□□ -2.17
SIX4Q9UIU6 SNORD14E-201ENST00000364009 85 ntBASIC1.52□□□□□ -2.17
SIX4Q9UIU6 Y_RNA.270-201ENST00000364693 104 ntBASIC1.52□□□□□ -2.17
SIX4Q9UIU6 RNU6-728P-201ENST00000365375 104 ntBASIC1.52□□□□□ -2.17
SIX4Q9UIU6 Y_RNA.486-201ENST00000384398 107 ntBASIC1.52□□□□□ -2.17
SIX4Q9UIU6 MIR30A-201ENST00000385092 71 ntBASIC1.52□□□□□ -2.17
SIX4Q9UIU6 JTBP1-201ENST00000441314 247 ntBASIC1.52□□□□□ -2.17
SIX4Q9UIU6 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
SIX4Q9UIU6 RNU7-12P-201ENST00000516030 62 ntBASIC1.52□□□□□ -2.17
SIX4Q9UIU6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.52□□□□□ -2.17
SIX4Q9UIU6 AL512598.1-201ENST00000610158 273 ntBASIC1.52□□□□□ -2.17
SIX4Q9UIU6 SNORD3E-202ENST00000627253 216 ntBASIC1.52□□□□□ -2.17
SIX4Q9UIU6 MIR378A-201ENST00000362177 66 ntBASIC1.51□□□□□ -2.17
SIX4Q9UIU6 U8.1-201ENST00000362843 134 ntBASIC1.51□□□□□ -2.17
SIX4Q9UIU6 Y_RNA.432-201ENST00000384087 111 ntBASIC1.51□□□□□ -2.17
SIX4Q9UIU6 RNU6-886P-201ENST00000384319 105 ntBASIC1.51□□□□□ -2.17
SIX4Q9UIU6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SIX4Q9UIU6 SEPT7P4-201ENST00000437076 306 ntBASIC1.51□□□□□ -2.17
SIX4Q9UIU6 Y_RNA.662-201ENST00000516028 97 ntBASIC1.51□□□□□ -2.17
SIX4Q9UIU6 RNU6-970P-201ENST00000516312 107 ntBASIC1.51□□□□□ -2.17
SIX4Q9UIU6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.51□□□□□ -2.17
SIX4Q9UIU6 AC027279.3-201ENST00000625055 122 ntBASIC1.51□□□□□ -2.17
SIX4Q9UIU6 ZNF209P-201ENST00000593450 2304 ntBASIC1.51□□□□□ -2.17
SIX4Q9UIU6 Y_RNA.23-201ENST00000362496 106 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 RNU6-833P-201ENST00000363486 107 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 Y_RNA.555-201ENST00000384673 110 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 MIR802-201ENST00000390235 94 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 MIR891A-201ENST00000401237 79 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 MIR548I3-201ENST00000408378 149 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 MIR1267-201ENST00000408723 78 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 MIR548I1-201ENST00000408810 149 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 AC004965.1-201ENST00000413033 213 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 RPL30P13-201ENST00000418873 348 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 SNRPGP14-201ENST00000435400 219 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 AC005908.1-201ENST00000468701 347 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 RNU6-1299P-201ENST00000516316 100 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 SUMO2P16-201ENST00000519475 264 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 SNORA77B-201ENST00000578179 125 ntBASIC1.5□□□□□ -2.17
SIX4Q9UIU6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.49□□□□□ -2.17
SIX4Q9UIU6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.49□□□□□ -2.17
SIX4Q9UIU6 RNU6-442P-201ENST00000383968 104 ntBASIC1.49□□□□□ -2.17
SIX4Q9UIU6 RNU6-643P-201ENST00000384018 107 ntBASIC1.49□□□□□ -2.17
SIX4Q9UIU6 RNU6-209P-201ENST00000384118 107 ntBASIC1.49□□□□□ -2.17
SIX4Q9UIU6 RNU4-43P-201ENST00000410628 137 ntBASIC1.49□□□□□ -2.17
SIX4Q9UIU6 RNU2-55P-201ENST00000411146 174 ntBASIC1.49□□□□□ -2.17
SIX4Q9UIU6 HMGN2P32-201ENST00000444648 269 ntBASIC1.49□□□□□ -2.17
SIX4Q9UIU6 RPS29P29-201ENST00000456396 171 ntBASIC1.49□□□□□ -2.17
SIX4Q9UIU6 Y_RNA.666-201ENST00000516187 112 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms