Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNU6-959P-201ENST00000384671 107 ntBASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 AC023449.1-201ENST00000454464 154 ntBASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 NDUFA4P2-201ENST00000489989 244 ntBASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORA31.10-201ENST00000516482 106 ntBASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-62P-201ENST00000516526 102 ntBASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 RNA5SP437-201ENST00000517249 129 ntBASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 AL160236.1-201ENST00000556317 195 ntBASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 AC022254.1-201ENST00000567857 235 ntBASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 RPL23AP91-201ENST00000569211 455 ntBASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORA40-201ENST00000388090 126 ntBASIC1.81□□□□□ -2.12
NCKIPSDQ9NZQ3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NCKIPSDQ9NZQ3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NCKIPSDQ9NZQ3 Y_RNA.586-201ENST00000391146 98 ntBASIC1.81□□□□□ -2.12
NCKIPSDQ9NZQ3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.81□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU7-94P-201ENST00000459576 63 ntBASIC1.81□□□□□ -2.12
NCKIPSDQ9NZQ3 AC108729.3-201ENST00000513484 108 ntBASIC1.81□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-426P-201ENST00000516464 97 ntBASIC1.81□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-126P-201ENST00000516685 103 ntBASIC1.81□□□□□ -2.12
NCKIPSDQ9NZQ3 AL591926.4-201ENST00000616895 298 ntBASIC1.81□□□□□ -2.12
NCKIPSDQ9NZQ3 AC010332.2-201ENST00000613083 1904 ntBASIC1.81□□□□□ -2.12
NCKIPSDQ9NZQ3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORD45.3-201ENST00000363836 72 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORA4.2-201ENST00000365313 147 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 Y_RNA.393-201ENST00000383936 102 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR562-201ENST00000384894 95 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORA67.5-201ENST00000391036 107 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORD37.2-201ENST00000391075 66 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-257P-201ENST00000410238 98 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 AC245047.3-201ENST00000429428 127 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 SNRPGP8-201ENST00000454064 226 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-479P-201ENST00000516348 105 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 AC112693.2-201ENST00000556538 232 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR4255-201ENST00000579351 72 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 AL049861.1-201ENST00000603130 150 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 AC084768.2-201ENST00000622736 221 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR6844-201ENST00000637122 62 ntBASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-414P-201ENST00000363705 104 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-818P-201ENST00000364837 108 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 RNA5SP190-201ENST00000365222 118 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-597P-201ENST00000365620 102 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 Y_RNA.432-201ENST00000384087 111 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 Y_RNA.521-201ENST00000384560 114 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-950P-201ENST00000384651 107 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORA26-201ENST00000391286 122 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORA75.5-201ENST00000391291 81 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU2-51P-201ENST00000410708 197 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 FTH1P12-201ENST00000432137 551 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 snoU13.27-201ENST00000459278 104 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU7-34P-201ENST00000459394 64 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 RNA5SP153-201ENST00000516498 76 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-197P-201ENST00000516680 100 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 AL358944.1-201ENST00000528537 144 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 AP002004.2-201ENST00000531656 154 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR4498-201ENST00000577599 66 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR3618-201ENST00000580330 88 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR378D2-201ENST00000580636 98 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 uc_338.4-201ENST00000616635 176 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR8054-201ENST00000620877 86 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR3658-201ENST00000636291 56 ntBASIC1.79□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR539-201ENST00000365690 78 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-484P-201ENST00000384016 107 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-439P-201ENST00000384188 106 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-22P-201ENST00000384355 107 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-768P-201ENST00000384683 107 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-360P-201ENST00000390944 104 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 Y_RNA.622-201ENST00000411091 108 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 HMGN1P7-201ENST00000491722 313 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORD77.4-201ENST00000516158 81 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 SNORA25.12-201ENST00000516202 82 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-1299P-201ENST00000516316 100 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR4709-201ENST00000577272 72 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR4662B-201ENST00000579498 81 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 MIR502-201ENST00000606349 86 ntBASIC1.78□□□□□ -2.12
NCKIPSDQ9NZQ3 RNU6-661P-201ENST00000362409 107 ntBASIC1.77□□□□□ -2.13
NCKIPSDQ9NZQ3 RPL31P63-201ENST00000422565 375 ntBASIC1.77□□□□□ -2.13
NCKIPSDQ9NZQ3 SNRPGP10-201ENST00000432323 225 ntBASIC1.77□□□□□ -2.13
NCKIPSDQ9NZQ3 AC003989.2-201ENST00000440224 169 ntBASIC1.77□□□□□ -2.13
NCKIPSDQ9NZQ3 RNU7-197P-201ENST00000458836 62 ntBASIC1.77□□□□□ -2.13
NCKIPSDQ9NZQ3 RNU2-56P-201ENST00000516826 190 ntBASIC1.77□□□□□ -2.13
NCKIPSDQ9NZQ3 RNU6-250P-201ENST00000516958 103 ntBASIC1.77□□□□□ -2.13
NCKIPSDQ9NZQ3 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
NCKIPSDQ9NZQ3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.77□□□□□ -2.13
NCKIPSDQ9NZQ3 JPX_2.1-201ENST00000614161 69 ntBASIC1.77□□□□□ -2.13
NCKIPSDQ9NZQ3 TUG1_4.1-201ENST00000619464 181 ntBASIC1.77□□□□□ -2.13
NCKIPSDQ9NZQ3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
NCKIPSDQ9NZQ3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NCKIPSDQ9NZQ3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 MIR126-201ENST00000362291 85 ntBASIC1.76□□□□□ -2.13
NCKIPSDQ9NZQ3 Y_RNA.242-201ENST00000364473 110 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms