Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 MIR583-201ENST00000384846 75 ntBASIC1.8□□□□□ -2.12
DDX56Q9NY93 SNORD41-201ENST00000386967 70 ntBASIC1.8□□□□□ -2.12
DDX56Q9NY93 RNU6-1228P-201ENST00000391014 107 ntBASIC1.8□□□□□ -2.12
DDX56Q9NY93 RNU6-918P-201ENST00000391219 106 ntBASIC1.8□□□□□ -2.12
DDX56Q9NY93 RNU6-847P-201ENST00000411115 108 ntBASIC1.8□□□□□ -2.12
DDX56Q9NY93 SNRPGP8-201ENST00000454064 226 ntBASIC1.8□□□□□ -2.12
DDX56Q9NY93 SNORD77.4-201ENST00000516158 81 ntBASIC1.8□□□□□ -2.12
DDX56Q9NY93 RNU6-561P-201ENST00000516222 102 ntBASIC1.8□□□□□ -2.12
DDX56Q9NY93 AL391903.3-201ENST00000612158 163 ntBASIC1.8□□□□□ -2.12
DDX56Q9NY93 RNU6-1138P-201ENST00000365359 106 ntBASIC1.79□□□□□ -2.12
DDX56Q9NY93 Y_RNA.571-201ENST00000384753 98 ntBASIC1.79□□□□□ -2.12
DDX56Q9NY93 MIR4744-201ENST00000581563 82 ntBASIC1.79□□□□□ -2.12
DDX56Q9NY93 Z83818.1-201ENST00000603584 150 ntBASIC1.79□□□□□ -2.12
DDX56Q9NY93 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
DDX56Q9NY93 RNU6-1020P-201ENST00000363684 107 ntBASIC1.78□□□□□ -2.12
DDX56Q9NY93 RNU6-103P-201ENST00000363686 107 ntBASIC1.78□□□□□ -2.12
DDX56Q9NY93 RNU6-268P-201ENST00000364174 107 ntBASIC1.78□□□□□ -2.12
DDX56Q9NY93 RNY3P5-201ENST00000384127 102 ntBASIC1.78□□□□□ -2.12
DDX56Q9NY93 Y_RNA.486-201ENST00000384398 107 ntBASIC1.78□□□□□ -2.12
DDX56Q9NY93 SNRPGP14-201ENST00000435400 219 ntBASIC1.78□□□□□ -2.12
DDX56Q9NY93 RPS29P23-201ENST00000458635 123 ntBASIC1.78□□□□□ -2.12
DDX56Q9NY93 Y_RNA.644-201ENST00000459006 113 ntBASIC1.78□□□□□ -2.12
DDX56Q9NY93 RNU6-947P-201ENST00000516264 106 ntBASIC1.78□□□□□ -2.12
DDX56Q9NY93 Y_RNA.674-201ENST00000516362 113 ntBASIC1.78□□□□□ -2.12
DDX56Q9NY93 SNORA74.3-201ENST00000517108 154 ntBASIC1.78□□□□□ -2.12
DDX56Q9NY93 AC006441.5-201ENST00000612680 209 ntBASIC1.78□□□□□ -2.12
DDX56Q9NY93 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
DDX56Q9NY93 RNU4-70P-201ENST00000384579 139 ntBASIC1.77□□□□□ -2.13
DDX56Q9NY93 SNORA40.18-201ENST00000391200 128 ntBASIC1.77□□□□□ -2.13
DDX56Q9NY93 UBL5P3-201ENST00000475112 231 ntBASIC1.77□□□□□ -2.13
DDX56Q9NY93 RNU6-830P-201ENST00000516353 107 ntBASIC1.77□□□□□ -2.13
DDX56Q9NY93 SNORD111.1-201ENST00000516421 86 ntBASIC1.77□□□□□ -2.13
DDX56Q9NY93 AC022559.1-201ENST00000520905 205 ntBASIC1.77□□□□□ -2.13
DDX56Q9NY93 AL161722.3-201ENST00000605789 2983 ntBASIC1.77□□□□□ -2.13
DDX56Q9NY93 AC084768.2-201ENST00000622736 221 ntBASIC1.77□□□□□ -2.13
DDX56Q9NY93 Y_RNA.182-201ENST00000363880 111 ntBASIC1.76□□□□□ -2.13
DDX56Q9NY93 RNU6-578P-201ENST00000390980 103 ntBASIC1.76□□□□□ -2.13
DDX56Q9NY93 SNORA26-201ENST00000391286 122 ntBASIC1.76□□□□□ -2.13
DDX56Q9NY93 MTND5P15-201ENST00000434246 349 ntBASIC1.76□□□□□ -2.13
DDX56Q9NY93 AL138752.1-201ENST00000452964 351 ntBASIC1.76□□□□□ -2.13
DDX56Q9NY93 Y_RNA.797-201ENST00000515977 94 ntBASIC1.76□□□□□ -2.13
DDX56Q9NY93 Y_RNA.666-201ENST00000516187 112 ntBASIC1.76□□□□□ -2.13
DDX56Q9NY93 RNU6-1299P-201ENST00000516316 100 ntBASIC1.76□□□□□ -2.13
DDX56Q9NY93 RNU7-43P-201ENST00000516554 64 ntBASIC1.76□□□□□ -2.13
DDX56Q9NY93 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.76□□□□□ -2.13
DDX56Q9NY93 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
DDX56Q9NY93 Y_RNA.121-201ENST00000363309 113 ntBASIC1.75□□□□□ -2.13
DDX56Q9NY93 SNORD45.3-201ENST00000363836 72 ntBASIC1.75□□□□□ -2.13
DDX56Q9NY93 RNU6-1067P-201ENST00000384752 107 ntBASIC1.75□□□□□ -2.13
DDX56Q9NY93 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.75□□□□□ -2.13
DDX56Q9NY93 RNU2-55P-201ENST00000411146 174 ntBASIC1.75□□□□□ -2.13
DDX56Q9NY93 Y_RNA.793-201ENST00000411222 111 ntBASIC1.75□□□□□ -2.13
DDX56Q9NY93 RNU1-98P-201ENST00000458992 160 ntBASIC1.75□□□□□ -2.13
DDX56Q9NY93 SNORA18.7-201ENST00000516910 131 ntBASIC1.75□□□□□ -2.13
DDX56Q9NY93 RNU6-794P-201ENST00000517261 64 ntBASIC1.75□□□□□ -2.13
DDX56Q9NY93 AC109810.1-201ENST00000534066 224 ntBASIC1.75□□□□□ -2.13
DDX56Q9NY93 AC108706.1-201ENST00000611053 297 ntBASIC1.75□□□□□ -2.13
DDX56Q9NY93 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.75□□□□□ -2.13
DDX56Q9NY93 RNU6-728P-201ENST00000365375 104 ntBASIC1.74□□□□□ -2.13
DDX56Q9NY93 RNU6-484P-201ENST00000384016 107 ntBASIC1.74□□□□□ -2.13
DDX56Q9NY93 MIR520C-201ENST00000385005 87 ntBASIC1.74□□□□□ -2.13
DDX56Q9NY93 MIR1261-201ENST00000408659 82 ntBASIC1.74□□□□□ -2.13
DDX56Q9NY93 AC108059.2-201ENST00000434626 151 ntBASIC1.74□□□□□ -2.13
DDX56Q9NY93 AL121914.1-201ENST00000450188 156 ntBASIC1.74□□□□□ -2.13
DDX56Q9NY93 snoU13.15-201ENST00000459407 104 ntBASIC1.74□□□□□ -2.13
DDX56Q9NY93 SNORA31.4-201ENST00000516049 129 ntBASIC1.74□□□□□ -2.13
DDX56Q9NY93 Y_RNA.91-201ENST00000363042 107 ntBASIC1.73□□□□□ -2.13
DDX56Q9NY93 SNORA1.2-201ENST00000365189 134 ntBASIC1.73□□□□□ -2.13
DDX56Q9NY93 Y_RNA.432-201ENST00000384087 111 ntBASIC1.73□□□□□ -2.13
DDX56Q9NY93 SNORD26-201ENST00000384147 75 ntBASIC1.73□□□□□ -2.13
DDX56Q9NY93 U8.13-201ENST00000390842 128 ntBASIC1.73□□□□□ -2.13
DDX56Q9NY93 SNORD123-201ENST00000459473 70 ntBASIC1.73□□□□□ -2.13
DDX56Q9NY93 RNU6-165P-201ENST00000517170 99 ntBASIC1.73□□□□□ -2.13
DDX56Q9NY93 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.73□□□□□ -2.13
DDX56Q9NY93 U6.106-201ENST00000636360 105 ntBASIC1.73□□□□□ -2.13
DDX56Q9NY93 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
DDX56Q9NY93 Y_RNA.233-201ENST00000364407 101 ntBASIC1.72□□□□□ -2.13
DDX56Q9NY93 Y_RNA.634-201ENST00000364811 113 ntBASIC1.72□□□□□ -2.13
DDX56Q9NY93 Y_RNA.412-201ENST00000384001 104 ntBASIC1.72□□□□□ -2.13
DDX56Q9NY93 RNU2-70P-201ENST00000410718 179 ntBASIC1.72□□□□□ -2.13
DDX56Q9NY93 snoU13.26-201ENST00000459452 105 ntBASIC1.72□□□□□ -2.13
DDX56Q9NY93 RNU6-365P-201ENST00000517113 106 ntBASIC1.72□□□□□ -2.13
DDX56Q9NY93 SNORA81.3-201ENST00000517283 198 ntBASIC1.72□□□□□ -2.13
DDX56Q9NY93 AP002392.1-201ENST00000537692 208 ntBASIC1.72□□□□□ -2.13
DDX56Q9NY93 MIR4255-201ENST00000579351 72 ntBASIC1.72□□□□□ -2.13
DDX56Q9NY93 AC015726.2-201ENST00000620112 122 ntBASIC1.72□□□□□ -2.13
DDX56Q9NY93 Y_RNA.29-201ENST00000362570 113 ntBASIC1.71□□□□□ -2.14
DDX56Q9NY93 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
DDX56Q9NY93 Y_RNA.435-201ENST00000384095 112 ntBASIC1.71□□□□□ -2.14
DDX56Q9NY93 RNU6-1054P-201ENST00000411293 104 ntBASIC1.71□□□□□ -2.14
DDX56Q9NY93 RNU6-1219P-201ENST00000516143 112 ntBASIC1.71□□□□□ -2.14
DDX56Q9NY93 RNU7-25P-201ENST00000516544 62 ntBASIC1.71□□□□□ -2.14
DDX56Q9NY93 MIR502-201ENST00000606349 86 ntBASIC1.71□□□□□ -2.14
DDX56Q9NY93 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
DDX56Q9NY93 AL442644.1-201ENST00000454390 3105 ntBASIC1.71□□□□□ -2.14
DDX56Q9NY93 SNORD61-201ENST00000384252 73 ntBASIC1.7□□□□□ -2.14
DDX56Q9NY93 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
DDX56Q9NY93 RNU6-693P-201ENST00000516134 107 ntBASIC1.7□□□□□ -2.14
DDX56Q9NY93 RNA5SP153-201ENST00000516498 76 ntBASIC1.7□□□□□ -2.14
DDX56Q9NY93 Y_RNA.700-201ENST00000516806 100 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 662.6 ms