Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 PGBD4P5-201ENST00000445958 426 ntBASIC3.03□□□□□ -1.92
ATG3Q9NT62 AC107297.1-201ENST00000459991 176 ntBASIC3.03□□□□□ -1.92
ATG3Q9NT62 RNU6-991P-201ENST00000516168 107 ntBASIC3.03□□□□□ -1.92
ATG3Q9NT62 AC026421.1-201ENST00000519101 163 ntBASIC3.03□□□□□ -1.92
ATG3Q9NT62 SUMO2P16-201ENST00000519475 264 ntBASIC3.03□□□□□ -1.92
ATG3Q9NT62 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.03□□□□□ -1.92
ATG3Q9NT62 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.03□□□□□ -1.93
ATG3Q9NT62 MIR302B-201ENST00000362188 73 ntBASIC3.02□□□□□ -1.93
ATG3Q9NT62 Y_RNA.213-201ENST00000364178 111 ntBASIC3.02□□□□□ -1.93
ATG3Q9NT62 Y_RNA.298-201ENST00000364960 107 ntBASIC3.02□□□□□ -1.93
ATG3Q9NT62 RNU6-690P-201ENST00000365242 106 ntBASIC3.02□□□□□ -1.93
ATG3Q9NT62 AL161788.1-201ENST00000441805 169 ntBASIC3.02□□□□□ -1.93
ATG3Q9NT62 CYP2C59P-201ENST00000457790 269 ntBASIC3.02□□□□□ -1.93
ATG3Q9NT62 RNA5SP57-201ENST00000459463 123 ntBASIC3.02□□□□□ -1.93
ATG3Q9NT62 CKS1BP2-201ENST00000497342 240 ntBASIC3.02□□□□□ -1.93
ATG3Q9NT62 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.02□□□□□ -1.93
ATG3Q9NT62 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.02□□□□□ -1.93
ATG3Q9NT62 MIR5007-201ENST00000583098 95 ntBASIC3.02□□□□□ -1.93
ATG3Q9NT62 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.02□□□□□ -1.93
ATG3Q9NT62 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.01□□□□□ -1.93
ATG3Q9NT62 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
ATG3Q9NT62 RNU6-743P-201ENST00000364151 106 ntBASIC3.01□□□□□ -1.93
ATG3Q9NT62 SNORA2.2-201ENST00000365473 135 ntBASIC3.01□□□□□ -1.93
ATG3Q9NT62 RNU2-63P-201ENST00000410792 194 ntBASIC3.01□□□□□ -1.93
ATG3Q9NT62 HMGN2P34-201ENST00000437647 269 ntBASIC3.01□□□□□ -1.93
ATG3Q9NT62 AC108210.2-201ENST00000503681 201 ntBASIC3.01□□□□□ -1.93
ATG3Q9NT62 RNU6-856P-201ENST00000516959 98 ntBASIC3.01□□□□□ -1.93
ATG3Q9NT62 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.01□□□□□ -1.93
ATG3Q9NT62 MIR4658-201ENST00000584344 65 ntBASIC3.01□□□□□ -1.93
ATG3Q9NT62 AC021443.1-201ENST00000604478 211 ntBASIC3.01□□□□□ -1.93
ATG3Q9NT62 MIR126-201ENST00000362291 85 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 Y_RNA.219-201ENST00000364232 113 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 SNORA64-201ENST00000384674 134 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 MIR548D2-201ENST00000384955 97 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 MIR95-201ENST00000385072 81 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 MIR1253-201ENST00000408273 105 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 Y_RNA.593-201ENST00000410292 98 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 AC009238.1-201ENST00000442165 424 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 AC009237.6-201ENST00000446969 424 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 AC109327.2-201ENST00000448339 378 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3□□□□□ -1.93
ATG3Q9NT62 AC022217.4-201ENST00000604389 163 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3□□□□□ -1.93
ATG3Q9NT62 AC067747.1-201ENST00000608026 250 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 MIR2052-201ENST00000636055 55 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 U6.108-201ENST00000637764 58 ntBASIC3□□□□□ -1.93
ATG3Q9NT62 RNU6-228P-201ENST00000362700 106 ntBASIC2.99□□□□□ -1.93
ATG3Q9NT62 Y_RNA.93-201ENST00000363066 109 ntBASIC2.99□□□□□ -1.93
ATG3Q9NT62 Y_RNA.107-201ENST00000363190 121 ntBASIC2.99□□□□□ -1.93
ATG3Q9NT62 RNA5SP99-201ENST00000364020 114 ntBASIC2.99□□□□□ -1.93
ATG3Q9NT62 Y_RNA.265-201ENST00000364677 108 ntBASIC2.99□□□□□ -1.93
ATG3Q9NT62 MIR522-201ENST00000385071 87 ntBASIC2.99□□□□□ -1.93
ATG3Q9NT62 RNA5SP467-201ENST00000391274 118 ntBASIC2.99□□□□□ -1.93
ATG3Q9NT62 RNA5SP225-201ENST00000410874 135 ntBASIC2.99□□□□□ -1.93
ATG3Q9NT62 RNU6-893P-201ENST00000458841 100 ntBASIC2.99□□□□□ -1.93
ATG3Q9NT62 AC093259.1-201ENST00000509755 300 ntBASIC2.99□□□□□ -1.93
ATG3Q9NT62 RNU7-123P-201ENST00000515911 60 ntBASIC2.99□□□□□ -1.93
ATG3Q9NT62 AL049779.4-201ENST00000604500 156 ntBASIC2.99□□□□□ -1.93
ATG3Q9NT62 AL355297.2-201ENST00000604792 129 ntBASIC2.99□□□□□ -1.93
ATG3Q9NT62 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATG3Q9NT62 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.99□□□□□ -1.93
ATG3Q9NT62 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ATG3Q9NT62 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ATG3Q9NT62 ZNF271P-202ENST00000465539 1970 ntBASIC2.98□□□□□ -1.93
ATG3Q9NT62 SNORA63D-201ENST00000364359 132 ntBASIC2.98□□□□□ -1.93
ATG3Q9NT62 Y_RNA.267-201ENST00000364679 109 ntBASIC2.98□□□□□ -1.93
ATG3Q9NT62 RNU6-1134P-201ENST00000365156 101 ntBASIC2.98□□□□□ -1.93
ATG3Q9NT62 Y_RNA.332-201ENST00000365271 113 ntBASIC2.98□□□□□ -1.93
ATG3Q9NT62 Y_RNA.466-201ENST00000384294 113 ntBASIC2.98□□□□□ -1.93
ATG3Q9NT62 MIR548O-201ENST00000408583 114 ntBASIC2.98□□□□□ -1.93
ATG3Q9NT62 AC123900.1-201ENST00000420390 96 ntBASIC2.98□□□□□ -1.93
ATG3Q9NT62 RNU7-164P-201ENST00000459221 62 ntBASIC2.98□□□□□ -1.93
ATG3Q9NT62 RNU7-99P-201ENST00000516271 62 ntBASIC2.98□□□□□ -1.93
ATG3Q9NT62 SNORD36C-201ENST00000516733 66 ntBASIC2.98□□□□□ -1.93
ATG3Q9NT62 HSPE1P19-201ENST00000603327 295 ntBASIC2.98□□□□□ -1.93
ATG3Q9NT62 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.98□□□□□ -1.93
ATG3Q9NT62 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
ATG3Q9NT62 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
ATG3Q9NT62 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ATG3Q9NT62 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ATG3Q9NT62 ZNF720P1-201ENST00000562403 1939 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 SNORA38-201ENST00000363946 132 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 RNU6-1189P-201ENST00000383958 107 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 RNU6-546P-201ENST00000383991 107 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 SNORA67.3-201ENST00000384366 140 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 RNU6-938P-201ENST00000411285 103 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 FTH1P12-201ENST00000432137 551 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 RNU7-25P-201ENST00000516544 62 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 SNORA48.11-201ENST00000517015 89 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ATG3Q9NT62 AC002984.1-201ENST00000591692 448 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 MIR6873-201ENST00000622788 63 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 MIR6079-201ENST00000635807 62 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 AL162726.3-218ENST00000636401 95 ntBASIC2.97□□□□□ -1.93
ATG3Q9NT62 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
ATG3Q9NT62 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ATG3Q9NT62 Y_RNA.17-201ENST00000362433 111 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 RNU1-23P-201ENST00000363361 144 ntBASIC2.96□□□□□ -1.94
ATG3Q9NT62 SNORA33-201ENST00000363664 130 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms