Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RNU6-667P-201ENST00000517186 102 ntBASIC5.74□□□□□ -1.49
SCAF1Q9H7N4 SNORD14A-201ENST00000606526 91 ntBASIC5.74□□□□□ -1.49
SCAF1Q9H7N4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SCAF1Q9H7N4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC5.73□□□□□ -1.49
SCAF1Q9H7N4 RNU6-1019P-201ENST00000364424 107 ntBASIC5.73□□□□□ -1.49
SCAF1Q9H7N4 MIR452-201ENST00000385020 85 ntBASIC5.73□□□□□ -1.49
SCAF1Q9H7N4 MIR95-201ENST00000385072 81 ntBASIC5.73□□□□□ -1.49
SCAF1Q9H7N4 RN7SL601P-201ENST00000471221 293 ntBASIC5.73□□□□□ -1.49
SCAF1Q9H7N4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC5.73□□□□□ -1.49
SCAF1Q9H7N4 CYP2C59P-201ENST00000457790 269 ntBASIC5.72□□□□□ -1.49
SCAF1Q9H7N4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SCAF1Q9H7N4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SCAF1Q9H7N4 RNY1P2-201ENST00000364820 117 ntBASIC5.71□□□□□ -1.5
SCAF1Q9H7N4 RNU6-291P-201ENST00000384720 107 ntBASIC5.71□□□□□ -1.5
SCAF1Q9H7N4 AC006111.3-201ENST00000622137 383 ntBASIC5.71□□□□□ -1.5
SCAF1Q9H7N4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
SCAF1Q9H7N4 RNU6-669P-201ENST00000365575 107 ntBASIC5.7□□□□□ -1.5
SCAF1Q9H7N4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCAF1Q9H7N4 MIR1179-201ENST00000408703 91 ntBASIC5.7□□□□□ -1.5
SCAF1Q9H7N4 AC027119.1-201ENST00000440877 241 ntBASIC5.7□□□□□ -1.5
SCAF1Q9H7N4 RNU6-881P-201ENST00000516813 102 ntBASIC5.7□□□□□ -1.5
SCAF1Q9H7N4 MIR6868-201ENST00000611215 58 ntBASIC5.7□□□□□ -1.5
SCAF1Q9H7N4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCAF1Q9H7N4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCAF1Q9H7N4 Y_RNA.283-201ENST00000364798 112 ntBASIC5.69□□□□□ -1.5
SCAF1Q9H7N4 Y_RNA.537-201ENST00000384626 109 ntBASIC5.69□□□□□ -1.5
SCAF1Q9H7N4 MIR184-201ENST00000384962 84 ntBASIC5.69□□□□□ -1.5
SCAF1Q9H7N4 BX276092.1-201ENST00000427368 251 ntBASIC5.69□□□□□ -1.5
SCAF1Q9H7N4 SNORA70.14-201ENST00000516205 110 ntBASIC5.69□□□□□ -1.5
SCAF1Q9H7N4 SNORA48.11-201ENST00000517015 89 ntBASIC5.69□□□□□ -1.5
SCAF1Q9H7N4 UCA1.1-201ENST00000620952 75 ntBASIC5.69□□□□□ -1.5
SCAF1Q9H7N4 Z97988.1-201ENST00000637697 135 ntBASIC5.69□□□□□ -1.5
SCAF1Q9H7N4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCAF1Q9H7N4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SCAF1Q9H7N4 SNORD6-201ENST00000365444 73 ntBASIC5.68□□□□□ -1.5
SCAF1Q9H7N4 RN7SL330P-201ENST00000469709 307 ntBASIC5.68□□□□□ -1.5
SCAF1Q9H7N4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC5.68□□□□□ -1.5
SCAF1Q9H7N4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SCAF1Q9H7N4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SCAF1Q9H7N4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SCAF1Q9H7N4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SCAF1Q9H7N4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCAF1Q9H7N4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SCAF1Q9H7N4 RNU6-1072P-201ENST00000384703 107 ntBASIC5.67□□□□□ -1.5
SCAF1Q9H7N4 RNU6-443P-201ENST00000384780 107 ntBASIC5.67□□□□□ -1.5
SCAF1Q9H7N4 MIR490-201ENST00000384865 128 ntBASIC5.67□□□□□ -1.5
SCAF1Q9H7N4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCAF1Q9H7N4 SNORD36A-201ENST00000362874 73 ntBASIC5.66□□□□□ -1.5
SCAF1Q9H7N4 RPS29P31-201ENST00000446147 164 ntBASIC5.66□□□□□ -1.5
SCAF1Q9H7N4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC5.66□□□□□ -1.5
SCAF1Q9H7N4 RN7SKP132-201ENST00000516001 208 ntBASIC5.66□□□□□ -1.5
SCAF1Q9H7N4 MIR3675-201ENST00000583661 73 ntBASIC5.66□□□□□ -1.5
SCAF1Q9H7N4 SNORD92-201ENST00000585078 85 ntBASIC5.66□□□□□ -1.5
SCAF1Q9H7N4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCAF1Q9H7N4 SNORD116-24-201ENST00000384549 92 ntBASIC5.65□□□□□ -1.51
SCAF1Q9H7N4 RNU6-1067P-201ENST00000384752 107 ntBASIC5.65□□□□□ -1.51
SCAF1Q9H7N4 HSPE1P9-201ENST00000440046 311 ntBASIC5.65□□□□□ -1.51
SCAF1Q9H7N4 SCARNA11.3-201ENST00000517276 130 ntBASIC5.65□□□□□ -1.51
SCAF1Q9H7N4 NDUFB9P3-201ENST00000521269 501 ntBASIC5.65□□□□□ -1.51
SCAF1Q9H7N4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SCAF1Q9H7N4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SCAF1Q9H7N4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
SCAF1Q9H7N4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SCAF1Q9H7N4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.64□□□□□ -1.51
SCAF1Q9H7N4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCAF1Q9H7N4 Y_RNA.99-201ENST00000363138 105 ntBASIC5.64□□□□□ -1.51
SCAF1Q9H7N4 RNU6-340P-201ENST00000364005 107 ntBASIC5.64□□□□□ -1.51
SCAF1Q9H7N4 RNU6-1077P-201ENST00000410506 102 ntBASIC5.64□□□□□ -1.51
SCAF1Q9H7N4 AC006011.1-201ENST00000442758 349 ntBASIC5.64□□□□□ -1.51
SCAF1Q9H7N4 AL357312.1-201ENST00000603879 298 ntBASIC5.64□□□□□ -1.51
SCAF1Q9H7N4 MIR7978-201ENST00000636158 59 ntBASIC5.64□□□□□ -1.51
SCAF1Q9H7N4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCAF1Q9H7N4 RNA5SP50-201ENST00000363731 107 ntBASIC5.63□□□□□ -1.51
SCAF1Q9H7N4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SCAF1Q9H7N4 MICF-203ENST00000432679 129 ntBASIC5.63□□□□□ -1.51
SCAF1Q9H7N4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC5.63□□□□□ -1.51
SCAF1Q9H7N4 AL355297.2-201ENST00000604792 129 ntBASIC5.63□□□□□ -1.51
SCAF1Q9H7N4 AC006386.2-201ENST00000624491 75 ntBASIC5.63□□□□□ -1.51
SCAF1Q9H7N4 AC012005.1-201ENST00000624575 75 ntBASIC5.63□□□□□ -1.51
SCAF1Q9H7N4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
SCAF1Q9H7N4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCAF1Q9H7N4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 RNU6-1216P-201ENST00000362590 107 ntBASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 SNORD45.1-201ENST00000363181 77 ntBASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 SNORA38.1-201ENST00000364172 131 ntBASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 RNA5SP97-201ENST00000365006 84 ntBASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 MIR516A2-201ENST00000384888 90 ntBASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 MIR516A1-201ENST00000385033 90 ntBASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 HSPE1P26-201ENST00000405341 275 ntBASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 SNORA3.3-201ENST00000408712 125 ntBASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 AC025518.1-201ENST00000479856 347 ntBASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 Y_RNA.722-201ENST00000517279 114 ntBASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 AC141846.1-201ENST00000568348 142 ntBASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 MIR4764-201ENST00000580680 88 ntBASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 RPL12P50-201ENST00000603116 116 ntBASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCAF1Q9H7N4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms