Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF39Q9H2S5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF39Q9H2S5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF39Q9H2S5 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RNF39Q9H2S5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RNF39Q9H2S5 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF39Q9H2S5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF39Q9H2S5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF39Q9H2S5 AL157398.1-201ENST00000452981 186 ntBASIC4.5□□□□□ -1.69
RNF39Q9H2S5 HMGN2P7-201ENST00000456186 273 ntBASIC4.5□□□□□ -1.69
RNF39Q9H2S5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF39Q9H2S5 U4.4-201ENST00000620626 117 ntBASIC4.5□□□□□ -1.69
RNF39Q9H2S5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF39Q9H2S5 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RNF39Q9H2S5 RNU6-513P-201ENST00000516104 104 ntBASIC4.49□□□□□ -1.69
RNF39Q9H2S5 MIR3936-201ENST00000584304 110 ntBASIC4.49□□□□□ -1.69
RNF39Q9H2S5 MIR7515-201ENST00000637837 67 ntBASIC4.49□□□□□ -1.69
RNF39Q9H2S5 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF39Q9H2S5 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF39Q9H2S5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF39Q9H2S5 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RNF39Q9H2S5 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF39Q9H2S5 RNU1-70P-201ENST00000362618 164 ntBASIC4.48□□□□□ -1.69
RNF39Q9H2S5 RNA5SP513-201ENST00000364648 118 ntBASIC4.48□□□□□ -1.69
RNF39Q9H2S5 MIR4264-201ENST00000583520 66 ntBASIC4.48□□□□□ -1.69
RNF39Q9H2S5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF39Q9H2S5 AC138207.3-201ENST00000585289 166 ntBASIC4.48□□□□□ -1.69
RNF39Q9H2S5 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RNF39Q9H2S5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNF39Q9H2S5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF39Q9H2S5 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RNF39Q9H2S5 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF39Q9H2S5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RNF39Q9H2S5 SNORA41B-201ENST00000384785 128 ntBASIC4.47□□□□□ -1.69
RNF39Q9H2S5 RPS29P7-201ENST00000439662 171 ntBASIC4.47□□□□□ -1.69
RNF39Q9H2S5 RNU7-62P-201ENST00000458856 62 ntBASIC4.47□□□□□ -1.69
RNF39Q9H2S5 SNORA84-201ENST00000459229 133 ntBASIC4.47□□□□□ -1.69
RNF39Q9H2S5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF39Q9H2S5 AC006272.2-201ENST00000594725 163 ntBASIC4.47□□□□□ -1.69
RNF39Q9H2S5 LINC00901.1-201ENST00000617252 152 ntBASIC4.47□□□□□ -1.69
RNF39Q9H2S5 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF39Q9H2S5 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF39Q9H2S5 IPO8P1-201ENST00000455509 3109 ntBASIC4.47□□□□□ -1.69
RNF39Q9H2S5 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.47□□□□□ -1.69
RNF39Q9H2S5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF39Q9H2S5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF39Q9H2S5 AC139713.2-215ENST00000641428 5037 ntBASIC4.46□□□□□ -1.7
RNF39Q9H2S5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.46□□□□□ -1.7
RNF39Q9H2S5 MIR1179-201ENST00000408703 91 ntBASIC4.46□□□□□ -1.7
RNF39Q9H2S5 RNA5SP103-201ENST00000459503 118 ntBASIC4.46□□□□□ -1.7
RNF39Q9H2S5 S100A11P1-201ENST00000477525 312 ntBASIC4.46□□□□□ -1.7
RNF39Q9H2S5 RNU7-174P-201ENST00000516248 59 ntBASIC4.46□□□□□ -1.7
RNF39Q9H2S5 MIR7110-201ENST00000612638 86 ntBASIC4.46□□□□□ -1.7
RNF39Q9H2S5 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.46□□□□□ -1.7
RNF39Q9H2S5 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RNF39Q9H2S5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
RNF39Q9H2S5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF39Q9H2S5 RNA5SP164-201ENST00000516533 110 ntBASIC4.45□□□□□ -1.7
RNF39Q9H2S5 MIR4286-201ENST00000580651 93 ntBASIC4.45□□□□□ -1.7
RNF39Q9H2S5 MAPK10-349ENST00000641767 3661 ntBASIC4.45□□□□□ -1.7
RNF39Q9H2S5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF39Q9H2S5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RNF39Q9H2S5 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF39Q9H2S5 AP006437.1-201ENST00000641440 3685 ntBASIC4.44□□□□□ -1.7
RNF39Q9H2S5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF39Q9H2S5 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
RNF39Q9H2S5 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF39Q9H2S5 RNU1-15P-201ENST00000353977 144 ntBASIC4.44□□□□□ -1.7
RNF39Q9H2S5 AC104619.4-201ENST00000510773 249 ntBASIC4.44□□□□□ -1.7
RNF39Q9H2S5 IGLV3-26-201ENST00000520756 302 ntBASIC4.44□□□□□ -1.7
RNF39Q9H2S5 IFITM8P-201ENST00000522529 394 ntBASIC4.44□□□□□ -1.7
RNF39Q9H2S5 AL606490.9-201ENST00000603331 271 ntBASIC4.44□□□□□ -1.7
RNF39Q9H2S5 MIR6868-201ENST00000611215 58 ntBASIC4.44□□□□□ -1.7
RNF39Q9H2S5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF39Q9H2S5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF39Q9H2S5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF39Q9H2S5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF39Q9H2S5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF39Q9H2S5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF39Q9H2S5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF39Q9H2S5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RNF39Q9H2S5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF39Q9H2S5 RNU6-396P-201ENST00000365369 105 ntBASIC4.43□□□□□ -1.7
RNF39Q9H2S5 RNU6-364P-201ENST00000384387 107 ntBASIC4.43□□□□□ -1.7
RNF39Q9H2S5 MIR183-201ENST00000384958 110 ntBASIC4.43□□□□□ -1.7
RNF39Q9H2S5 SNORA40B-201ENST00000385573 128 ntBASIC4.43□□□□□ -1.7
RNF39Q9H2S5 MIR216B-201ENST00000390186 82 ntBASIC4.43□□□□□ -1.7
RNF39Q9H2S5 RN7SL542P-201ENST00000467147 294 ntBASIC4.43□□□□□ -1.7
RNF39Q9H2S5 MIR4709-201ENST00000577272 72 ntBASIC4.43□□□□□ -1.7
RNF39Q9H2S5 MIR4429-201ENST00000580105 73 ntBASIC4.43□□□□□ -1.7
RNF39Q9H2S5 MIR5684-201ENST00000585074 65 ntBASIC4.43□□□□□ -1.7
RNF39Q9H2S5 MIR6500-201ENST00000622700 86 ntBASIC4.43□□□□□ -1.7
RNF39Q9H2S5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF39Q9H2S5 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RNF39Q9H2S5 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF39Q9H2S5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF39Q9H2S5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF39Q9H2S5 RNA5SP48-201ENST00000363969 126 ntBASIC4.42□□□□□ -1.7
RNF39Q9H2S5 SNORD115-44-201ENST00000365391 82 ntBASIC4.42□□□□□ -1.7
RNF39Q9H2S5 RNU6-1162P-201ENST00000384443 104 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms