Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 SNORA12.1-201ENST00000390873 148 ntBASIC1.79□□□□□ -2.12
CDT1Q9H211 RNU11-5P-201ENST00000391216 129 ntBASIC1.79□□□□□ -2.12
CDT1Q9H211 Y_RNA.621-201ENST00000411065 96 ntBASIC1.79□□□□□ -2.12
CDT1Q9H211 snoU13.18-201ENST00000459483 104 ntBASIC1.79□□□□□ -2.12
CDT1Q9H211 MIR4448-201ENST00000584360 86 ntBASIC1.79□□□□□ -2.12
CDT1Q9H211 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.79□□□□□ -2.12
CDT1Q9H211 Y_RNA.778-201ENST00000620203 90 ntBASIC1.79□□□□□ -2.12
CDT1Q9H211 Y_RNA.91-201ENST00000363042 107 ntBASIC1.78□□□□□ -2.12
CDT1Q9H211 RNU6-457P-201ENST00000363999 107 ntBASIC1.78□□□□□ -2.12
CDT1Q9H211 Y_RNA.253-201ENST00000364562 112 ntBASIC1.78□□□□□ -2.12
CDT1Q9H211 Y_RNA.400-201ENST00000383963 111 ntBASIC1.78□□□□□ -2.12
CDT1Q9H211 RNU6-768P-201ENST00000384683 107 ntBASIC1.78□□□□□ -2.12
CDT1Q9H211 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.78□□□□□ -2.12
CDT1Q9H211 SNRPGP10-201ENST00000432323 225 ntBASIC1.78□□□□□ -2.12
CDT1Q9H211 HSPE1P9-201ENST00000440046 311 ntBASIC1.78□□□□□ -2.12
CDT1Q9H211 SNORA31.10-201ENST00000516482 106 ntBASIC1.78□□□□□ -2.12
CDT1Q9H211 AC024614.2-201ENST00000577584 372 ntBASIC1.78□□□□□ -2.12
CDT1Q9H211 uc_338.4-201ENST00000616635 176 ntBASIC1.78□□□□□ -2.12
CDT1Q9H211 MIR8054-201ENST00000620877 86 ntBASIC1.78□□□□□ -2.12
CDT1Q9H211 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDT1Q9H211 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
CDT1Q9H211 Y_RNA.116-201ENST00000363292 103 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 RNU6-704P-201ENST00000364162 103 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 Y_RNA.215-201ENST00000364204 112 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 RNU6-1082P-201ENST00000364574 107 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 RNU6-643P-201ENST00000384018 107 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 Y_RNA.486-201ENST00000384398 107 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 SNORA20-201ENST00000384662 132 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 MIR562-201ENST00000384894 95 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 MIR569-201ENST00000385228 96 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 RNU6-440P-201ENST00000390882 105 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 RNA5SP496-201ENST00000391240 109 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 RNU6-321P-201ENST00000410912 106 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.77□□□□□ -2.13
CDT1Q9H211 AC005840.1-201ENST00000498412 377 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 RNU6-426P-201ENST00000516464 97 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 AL591926.4-201ENST00000616895 298 ntBASIC1.77□□□□□ -2.13
CDT1Q9H211 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CDT1Q9H211 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CDT1Q9H211 RNU4-11P-201ENST00000365287 132 ntBASIC1.76□□□□□ -2.13
CDT1Q9H211 RNU6-728P-201ENST00000365375 104 ntBASIC1.76□□□□□ -2.13
CDT1Q9H211 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CDT1Q9H211 SNORD72-201ENST00000390994 80 ntBASIC1.76□□□□□ -2.13
CDT1Q9H211 RNU6-588P-201ENST00000410281 105 ntBASIC1.76□□□□□ -2.13
CDT1Q9H211 RNU4-43P-201ENST00000410628 137 ntBASIC1.76□□□□□ -2.13
CDT1Q9H211 SNORD77.4-201ENST00000516158 81 ntBASIC1.76□□□□□ -2.13
CDT1Q9H211 RNU7-149P-201ENST00000516739 59 ntBASIC1.76□□□□□ -2.13
CDT1Q9H211 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.76□□□□□ -2.13
CDT1Q9H211 MIR4713-201ENST00000582691 75 ntBASIC1.76□□□□□ -2.13
CDT1Q9H211 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.76□□□□□ -2.13
CDT1Q9H211 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CDT1Q9H211 RNY3P5-201ENST00000384127 102 ntBASIC1.75□□□□□ -2.13
CDT1Q9H211 Y_RNA.568-201ENST00000384742 113 ntBASIC1.75□□□□□ -2.13
CDT1Q9H211 MIR613-201ENST00000385248 95 ntBASIC1.75□□□□□ -2.13
CDT1Q9H211 MLLT10P1-201ENST00000418346 262 ntBASIC1.75□□□□□ -2.13
CDT1Q9H211 AL606753.1-201ENST00000427435 87 ntBASIC1.75□□□□□ -2.13
CDT1Q9H211 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.75□□□□□ -2.13
CDT1Q9H211 AL049830.1-201ENST00000468034 425 ntBASIC1.75□□□□□ -2.13
CDT1Q9H211 RNA5SP481-201ENST00000516814 122 ntBASIC1.75□□□□□ -2.13
CDT1Q9H211 RNU2-56P-201ENST00000516826 190 ntBASIC1.75□□□□□ -2.13
CDT1Q9H211 AP002004.2-201ENST00000531656 154 ntBASIC1.75□□□□□ -2.13
CDT1Q9H211 AC022254.1-201ENST00000567857 235 ntBASIC1.75□□□□□ -2.13
CDT1Q9H211 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.75□□□□□ -2.13
CDT1Q9H211 MIR4303-201ENST00000581299 66 ntBASIC1.75□□□□□ -2.13
CDT1Q9H211 MIR8070-201ENST00000616510 88 ntBASIC1.75□□□□□ -2.13
CDT1Q9H211 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CDT1Q9H211 MIR126-201ENST00000362291 85 ntBASIC1.74□□□□□ -2.13
CDT1Q9H211 RNU6-439P-201ENST00000384188 106 ntBASIC1.74□□□□□ -2.13
CDT1Q9H211 MIR522-201ENST00000385071 87 ntBASIC1.74□□□□□ -2.13
CDT1Q9H211 RNU7-197P-201ENST00000458836 62 ntBASIC1.74□□□□□ -2.13
CDT1Q9H211 snoU13.27-201ENST00000459278 104 ntBASIC1.74□□□□□ -2.13
CDT1Q9H211 HMGN1P7-201ENST00000491722 313 ntBASIC1.74□□□□□ -2.13
CDT1Q9H211 AC107027.2-201ENST00000512197 115 ntBASIC1.74□□□□□ -2.13
CDT1Q9H211 SNORA25.12-201ENST00000516202 82 ntBASIC1.74□□□□□ -2.13
CDT1Q9H211 RNU6-1116P-201ENST00000517269 99 ntBASIC1.74□□□□□ -2.13
CDT1Q9H211 AC120024.3-201ENST00000603167 156 ntBASIC1.74□□□□□ -2.13
CDT1Q9H211 Pinc.1-201ENST00000616452 154 ntBASIC1.74□□□□□ -2.13
CDT1Q9H211 uc_338.20-201ENST00000621563 178 ntBASIC1.74□□□□□ -2.13
CDT1Q9H211 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
CDT1Q9H211 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.73□□□□□ -2.13
CDT1Q9H211 RNU6-978P-201ENST00000364371 103 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 Y_RNA.265-201ENST00000364677 108 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 Y_RNA.634-201ENST00000364811 113 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 SNORD50B-201ENST00000364995 70 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 Y_RNA.337-201ENST00000365312 102 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 Y_RNA.488-201ENST00000384403 102 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 Y_RNA.497-201ENST00000384447 98 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CDT1Q9H211 RNU6-257P-201ENST00000410238 98 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.73□□□□□ -2.13
CDT1Q9H211 STAG3L5P-204ENST00000443759 179 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 RNU7-34P-201ENST00000459394 64 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.73□□□□□ -2.13
CDT1Q9H211 AC092991.1-201ENST00000477176 376 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 TRMT112P2-201ENST00000512910 132 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 RNU6-789P-201ENST00000517105 102 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 AL358944.1-201ENST00000528537 144 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 MIR378D2-201ENST00000580636 98 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 DNAJC19P2-201ENST00000593340 302 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 AL359821.1-201ENST00000605519 182 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 771.3 ms