Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MIR7153-201ENST00000637758 57 ntBASIC3.46□□□□□ -1.86
PHOX2BQ99453 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PHOX2BQ99453 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PHOX2BQ99453 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PHOX2BQ99453 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PHOX2BQ99453 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PHOX2BQ99453 RNU1-70P-201ENST00000362618 164 ntBASIC3.45□□□□□ -1.86
PHOX2BQ99453 Y_RNA.95-201ENST00000363079 95 ntBASIC3.45□□□□□ -1.86
PHOX2BQ99453 Y_RNA.171-201ENST00000363760 102 ntBASIC3.45□□□□□ -1.86
PHOX2BQ99453 SNORD116-22-201ENST00000384430 92 ntBASIC3.45□□□□□ -1.86
PHOX2BQ99453 RNU6-1031P-201ENST00000384773 107 ntBASIC3.45□□□□□ -1.86
PHOX2BQ99453 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.45□□□□□ -1.86
PHOX2BQ99453 RNU6-679P-201ENST00000391003 106 ntBASIC3.45□□□□□ -1.86
PHOX2BQ99453 RN7SKP220-201ENST00000410611 288 ntBASIC3.45□□□□□ -1.86
PHOX2BQ99453 RNA5SP508-201ENST00000411327 119 ntBASIC3.45□□□□□ -1.86
PHOX2BQ99453 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.45□□□□□ -1.86
PHOX2BQ99453 AC022254.1-201ENST00000567857 235 ntBASIC3.45□□□□□ -1.86
PHOX2BQ99453 AC025521.1-201ENST00000621624 286 ntBASIC3.45□□□□□ -1.86
PHOX2BQ99453 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PHOX2BQ99453 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PHOX2BQ99453 RNU1-91P-201ENST00000364746 163 ntBASIC3.44□□□□□ -1.86
PHOX2BQ99453 RNU6-1201P-201ENST00000384227 107 ntBASIC3.44□□□□□ -1.86
PHOX2BQ99453 HSPE1P9-201ENST00000440046 311 ntBASIC3.44□□□□□ -1.86
PHOX2BQ99453 AC108938.1-201ENST00000451204 136 ntBASIC3.44□□□□□ -1.86
PHOX2BQ99453 Y_RNA.659-201ENST00000515994 113 ntBASIC3.44□□□□□ -1.86
PHOX2BQ99453 MIR4738-201ENST00000579134 87 ntBASIC3.44□□□□□ -1.86
PHOX2BQ99453 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.44□□□□□ -1.86
PHOX2BQ99453 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.44□□□□□ -1.86
PHOX2BQ99453 AL512310.12-203ENST00000640543 90 ntBASIC3.44□□□□□ -1.86
PHOX2BQ99453 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.44□□□□□ -1.86
PHOX2BQ99453 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PHOX2BQ99453 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
PHOX2BQ99453 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PHOX2BQ99453 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PHOX2BQ99453 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PHOX2BQ99453 MIR520A-201ENST00000384862 85 ntBASIC3.43□□□□□ -1.86
PHOX2BQ99453 RNA5SP465-201ENST00000391195 109 ntBASIC3.43□□□□□ -1.86
PHOX2BQ99453 RNU6-887P-201ENST00000410660 100 ntBASIC3.43□□□□□ -1.86
PHOX2BQ99453 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.43□□□□□ -1.86
PHOX2BQ99453 RN7SL330P-201ENST00000469709 307 ntBASIC3.43□□□□□ -1.86
PHOX2BQ99453 RNU2-13P-201ENST00000515909 113 ntBASIC3.43□□□□□ -1.86
PHOX2BQ99453 MIR548AE2-201ENST00000583456 67 ntBASIC3.43□□□□□ -1.86
PHOX2BQ99453 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.43□□□□□ -1.86
PHOX2BQ99453 AL513423.1-201ENST00000621695 132 ntBASIC3.43□□□□□ -1.86
PHOX2BQ99453 MIR6717-201ENST00000622747 73 ntBASIC3.43□□□□□ -1.86
PHOX2BQ99453 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PHOX2BQ99453 PWAR6-201ENST00000552334 4618 ntBASIC3.43□□□□□ -1.86
PHOX2BQ99453 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.43□□□□□ -1.86
PHOX2BQ99453 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.43□□□□□ -1.86
PHOX2BQ99453 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PHOX2BQ99453 RNU6-1313P-201ENST00000362622 102 ntBASIC3.42□□□□□ -1.86
PHOX2BQ99453 RNU6-616P-201ENST00000384353 107 ntBASIC3.42□□□□□ -1.86
PHOX2BQ99453 MIR516B2-201ENST00000385190 85 ntBASIC3.42□□□□□ -1.86
PHOX2BQ99453 RNU11-3P-201ENST00000391111 133 ntBASIC3.42□□□□□ -1.86
PHOX2BQ99453 RNU4-47P-201ENST00000410876 114 ntBASIC3.42□□□□□ -1.86
PHOX2BQ99453 BX510359.4-201ENST00000423750 193 ntBASIC3.42□□□□□ -1.86
PHOX2BQ99453 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.42□□□□□ -1.86
PHOX2BQ99453 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.42□□□□□ -1.86
PHOX2BQ99453 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.42□□□□□ -1.86
PHOX2BQ99453 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PHOX2BQ99453 SNORA1.1-201ENST00000364671 133 ntBASIC3.41□□□□□ -1.86
PHOX2BQ99453 RNU2-7P-201ENST00000410794 178 ntBASIC3.41□□□□□ -1.86
PHOX2BQ99453 RPL39P39-201ENST00000455840 151 ntBASIC3.41□□□□□ -1.86
PHOX2BQ99453 RNU7-45P-201ENST00000459460 63 ntBASIC3.41□□□□□ -1.86
PHOX2BQ99453 AC022137.1-201ENST00000483735 151 ntBASIC3.41□□□□□ -1.86
PHOX2BQ99453 RNU6-521P-201ENST00000516663 105 ntBASIC3.41□□□□□ -1.86
PHOX2BQ99453 RNA5SP481-201ENST00000516814 122 ntBASIC3.41□□□□□ -1.86
PHOX2BQ99453 MIR4777-201ENST00000583710 86 ntBASIC3.41□□□□□ -1.86
PHOX2BQ99453 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.41□□□□□ -1.86
PHOX2BQ99453 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
PHOX2BQ99453 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PHOX2BQ99453 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PHOX2BQ99453 SNORA38-201ENST00000363946 132 ntBASIC3.4□□□□□ -1.87
PHOX2BQ99453 SNORA26.6-201ENST00000391256 115 ntBASIC3.4□□□□□ -1.87
PHOX2BQ99453 AL603825.1-201ENST00000438481 80 ntBASIC3.4□□□□□ -1.87
PHOX2BQ99453 snoU13.26-201ENST00000459452 105 ntBASIC3.4□□□□□ -1.87
PHOX2BQ99453 NDUFB9P3-201ENST00000521269 501 ntBASIC3.4□□□□□ -1.87
PHOX2BQ99453 MIR4319-201ENST00000577285 85 ntBASIC3.4□□□□□ -1.87
PHOX2BQ99453 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PHOX2BQ99453 AC243994.1-201ENST00000618627 109 ntBASIC3.4□□□□□ -1.87
PHOX2BQ99453 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PHOX2BQ99453 AL356274.2-201ENST00000624379 3752 ntBASIC3.39□□□□□ -1.87
PHOX2BQ99453 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PHOX2BQ99453 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.39□□□□□ -1.87
PHOX2BQ99453 Y_RNA.354-201ENST00000365448 111 ntBASIC3.39□□□□□ -1.87
PHOX2BQ99453 RNU6-675P-201ENST00000384236 104 ntBASIC3.39□□□□□ -1.87
PHOX2BQ99453 Y_RNA.537-201ENST00000384626 109 ntBASIC3.39□□□□□ -1.87
PHOX2BQ99453 RPL32P35-201ENST00000415214 394 ntBASIC3.39□□□□□ -1.87
PHOX2BQ99453 AL353813.1-201ENST00000440700 253 ntBASIC3.39□□□□□ -1.87
PHOX2BQ99453 Z96811.1-201ENST00000445880 108 ntBASIC3.39□□□□□ -1.87
PHOX2BQ99453 RN7SKP132-201ENST00000516001 208 ntBASIC3.39□□□□□ -1.87
PHOX2BQ99453 RNU6-162P-201ENST00000516228 103 ntBASIC3.39□□□□□ -1.87
PHOX2BQ99453 RNU6-1258P-201ENST00000516911 111 ntBASIC3.39□□□□□ -1.87
PHOX2BQ99453 AL020996.3-201ENST00000606617 222 ntBASIC3.39□□□□□ -1.87
PHOX2BQ99453 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PHOX2BQ99453 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PHOX2BQ99453 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PHOX2BQ99453 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PHOX2BQ99453 SNORD116-10-201ENST00000363791 102 ntBASIC3.38□□□□□ -1.87
PHOX2BQ99453 RNU6-1124P-201ENST00000384169 107 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms