Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 RN7SL274P-201ENST00000492268 272 ntBASIC2.05□□□□□ -2.08
HAPLN3Q96S86 RNA5SP458-201ENST00000516188 119 ntBASIC2.05□□□□□ -2.08
HAPLN3Q96S86 RNU6-62P-201ENST00000516526 102 ntBASIC2.05□□□□□ -2.08
HAPLN3Q96S86 AC007751.1-201ENST00000529260 376 ntBASIC2.05□□□□□ -2.08
HAPLN3Q96S86 AP002004.2-201ENST00000531656 154 ntBASIC2.05□□□□□ -2.08
HAPLN3Q96S86 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
HAPLN3Q96S86 SNORA63D-201ENST00000364359 132 ntBASIC2.04□□□□□ -2.08
HAPLN3Q96S86 SNORA25.7-201ENST00000364375 127 ntBASIC2.04□□□□□ -2.08
HAPLN3Q96S86 SNORA1-201ENST00000384107 130 ntBASIC2.04□□□□□ -2.08
HAPLN3Q96S86 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HAPLN3Q96S86 RNU6-1154P-201ENST00000391001 104 ntBASIC2.04□□□□□ -2.08
HAPLN3Q96S86 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.04□□□□□ -2.08
HAPLN3Q96S86 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.04□□□□□ -2.08
HAPLN3Q96S86 Y_RNA.686-201ENST00000516548 134 ntBASIC2.04□□□□□ -2.08
HAPLN3Q96S86 RNU2-56P-201ENST00000516826 190 ntBASIC2.04□□□□□ -2.08
HAPLN3Q96S86 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.04□□□□□ -2.08
HAPLN3Q96S86 MIR4662B-201ENST00000579498 81 ntBASIC2.04□□□□□ -2.08
HAPLN3Q96S86 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HAPLN3Q96S86 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.04□□□□□ -2.08
HAPLN3Q96S86 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.04□□□□□ -2.08
HAPLN3Q96S86 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
HAPLN3Q96S86 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HAPLN3Q96S86 RNU6-1290P-201ENST00000362957 109 ntBASIC2.03□□□□□ -2.08
HAPLN3Q96S86 Y_RNA.294-201ENST00000364916 102 ntBASIC2.03□□□□□ -2.08
HAPLN3Q96S86 RNU6-915P-201ENST00000364943 103 ntBASIC2.03□□□□□ -2.08
HAPLN3Q96S86 SNORD50B-201ENST00000364995 70 ntBASIC2.03□□□□□ -2.08
HAPLN3Q96S86 SNORD61-201ENST00000384252 73 ntBASIC2.03□□□□□ -2.08
HAPLN3Q96S86 MIR520A-201ENST00000384862 85 ntBASIC2.03□□□□□ -2.08
HAPLN3Q96S86 Y_RNA.584-201ENST00000391090 114 ntBASIC2.03□□□□□ -2.08
HAPLN3Q96S86 Y_RNA.666-201ENST00000516187 112 ntBASIC2.03□□□□□ -2.08
HAPLN3Q96S86 RNU6-295P-201ENST00000516901 104 ntBASIC2.03□□□□□ -2.08
HAPLN3Q96S86 RNU6-365P-201ENST00000517113 106 ntBASIC2.03□□□□□ -2.08
HAPLN3Q96S86 RNU2-60P-201ENST00000517290 128 ntBASIC2.03□□□□□ -2.08
HAPLN3Q96S86 AP001328.1-201ENST00000528550 176 ntBASIC2.03□□□□□ -2.08
HAPLN3Q96S86 MIR4762-201ENST00000585261 75 ntBASIC2.03□□□□□ -2.08
HAPLN3Q96S86 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.03□□□□□ -2.08
HAPLN3Q96S86 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
HAPLN3Q96S86 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
HAPLN3Q96S86 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HAPLN3Q96S86 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HAPLN3Q96S86 U8.1-201ENST00000362843 134 ntBASIC2.02□□□□□ -2.09
HAPLN3Q96S86 RNU6-508P-201ENST00000363231 103 ntBASIC2.02□□□□□ -2.09
HAPLN3Q96S86 RNU6-112P-201ENST00000363599 104 ntBASIC2.02□□□□□ -2.09
HAPLN3Q96S86 SNORA26.9-201ENST00000391322 122 ntBASIC2.02□□□□□ -2.09
HAPLN3Q96S86 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.02□□□□□ -2.09
HAPLN3Q96S86 SNORA31.10-201ENST00000516482 106 ntBASIC2.02□□□□□ -2.09
HAPLN3Q96S86 AC090142.3-201ENST00000519012 385 ntBASIC2.02□□□□□ -2.09
HAPLN3Q96S86 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.02□□□□□ -2.09
HAPLN3Q96S86 TUG1_4.1-201ENST00000619464 181 ntBASIC2.02□□□□□ -2.09
HAPLN3Q96S86 SNORD68-201ENST00000363214 84 ntBASIC2.01□□□□□ -2.09
HAPLN3Q96S86 Y_RNA.127-201ENST00000363386 109 ntBASIC2.01□□□□□ -2.09
HAPLN3Q96S86 RNU6-950P-201ENST00000384651 107 ntBASIC2.01□□□□□ -2.09
HAPLN3Q96S86 MIR548A2-201ENST00000384956 97 ntBASIC2.01□□□□□ -2.09
HAPLN3Q96S86 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HAPLN3Q96S86 SNORA26-201ENST00000391286 122 ntBASIC2.01□□□□□ -2.09
HAPLN3Q96S86 RNU6-735P-201ENST00000410612 107 ntBASIC2.01□□□□□ -2.09
HAPLN3Q96S86 AC245047.3-201ENST00000429428 127 ntBASIC2.01□□□□□ -2.09
HAPLN3Q96S86 RNU6-313P-201ENST00000516317 112 ntBASIC2.01□□□□□ -2.09
HAPLN3Q96S86 RNU6-504P-201ENST00000516568 104 ntBASIC2.01□□□□□ -2.09
HAPLN3Q96S86 MIR8054-201ENST00000620877 86 ntBASIC2.01□□□□□ -2.09
HAPLN3Q96S86 AC008555.8-201ENST00000623602 2168 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 RNA5SP99-201ENST00000364020 114 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 U8.5-201ENST00000364528 136 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 RNA5SP205-201ENST00000364653 136 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 MIR539-201ENST00000365690 78 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 SNORD116-14-201ENST00000383894 92 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 SNORD116-17-201ENST00000383929 92 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 SNORD116-15-201ENST00000384445 92 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 Y_RNA.525-201ENST00000384570 113 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 RNU6-296P-201ENST00000384608 107 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 SNORD116-19-201ENST00000384729 92 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 MIR583-201ENST00000384846 75 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 RNU6-440P-201ENST00000390882 105 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 RNA5SP100-201ENST00000410903 110 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 RNA5SP59-201ENST00000410922 110 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2□□□□□ -2.09
HAPLN3Q96S86 AC008267.6-201ENST00000441664 139 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2□□□□□ -2.09
HAPLN3Q96S86 RNU6-1333P-201ENST00000516162 93 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 RNU6-126P-201ENST00000516685 103 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 RNU7-28P-201ENST00000516759 62 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 5S_rRNA.3-201ENST00000517021 110 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 RNU6-1270P-201ENST00000517128 108 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 MIR3129-201ENST00000581095 76 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 AC131055.1-201ENST00000584626 316 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 AL365205.2-201ENST00000594586 68 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 U7.2-201ENST00000607576 63 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 AC011603.4-201ENST00000611325 277 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 5S_rRNA.19-201ENST00000612131 110 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 5S_rRNA.18-201ENST00000621941 110 ntBASIC2□□□□□ -2.09
HAPLN3Q96S86 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HAPLN3Q96S86 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HAPLN3Q96S86 RNU6-888P-201ENST00000363010 101 ntBASIC1.99□□□□□ -2.09
HAPLN3Q96S86 SNORD24-201ENST00000383884 75 ntBASIC1.99□□□□□ -2.09
HAPLN3Q96S86 RNU6-80P-201ENST00000384195 107 ntBASIC1.99□□□□□ -2.09
HAPLN3Q96S86 AL158823.1-201ENST00000418441 478 ntBASIC1.99□□□□□ -2.09
HAPLN3Q96S86 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.99□□□□□ -2.09
HAPLN3Q96S86 SNRPGP14-201ENST00000435400 219 ntBASIC1.99□□□□□ -2.09
HAPLN3Q96S86 RNU4-57P-201ENST00000515980 135 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms