Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
R3HDM4Q96D70 RNU6-199P-201ENST00000362954 107 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 RNY1P11-201ENST00000363759 113 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 Y_RNA.343-201ENST00000365354 112 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 RNU6-1336P-201ENST00000383886 109 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 SNORA1-201ENST00000384107 130 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 Y_RNA.542-201ENST00000384641 111 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 MIR660-201ENST00000385235 97 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 SNORD37.2-201ENST00000391075 66 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 MIR891A-201ENST00000401237 79 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 MIR548O-201ENST00000408583 114 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 RNU6-588P-201ENST00000410281 105 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 AC244636.1-201ENST00000421152 228 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 AC092991.1-201ENST00000477176 376 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 AC104435.1-201ENST00000483483 166 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 RNU6-1270P-201ENST00000517128 108 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 MIR1273D-201ENST00000577266 86 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 MIR5007-201ENST00000583098 95 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 AL773524.1-201ENST00000614065 229 ntBASIC1.84□□□□□ -2.11
R3HDM4Q96D70 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
R3HDM4Q96D70 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
R3HDM4Q96D70 MIR424-201ENST00000362227 98 ntBASIC1.83□□□□□ -2.12
R3HDM4Q96D70 RNA5SP338-201ENST00000410495 85 ntBASIC1.83□□□□□ -2.12
R3HDM4Q96D70 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.83□□□□□ -2.12
R3HDM4Q96D70 TMSB4XP3-201ENST00000445144 114 ntBASIC1.83□□□□□ -2.12
R3HDM4Q96D70 PGBD4P5-201ENST00000445958 426 ntBASIC1.83□□□□□ -2.12
R3HDM4Q96D70 RNU6-717P-201ENST00000459076 104 ntBASIC1.83□□□□□ -2.12
R3HDM4Q96D70 RNA5SP57-201ENST00000459463 123 ntBASIC1.83□□□□□ -2.12
R3HDM4Q96D70 RNU6-237P-201ENST00000515985 71 ntBASIC1.83□□□□□ -2.12
R3HDM4Q96D70 RNU6-693P-201ENST00000516134 107 ntBASIC1.83□□□□□ -2.12
R3HDM4Q96D70 SNORA25.12-201ENST00000516202 82 ntBASIC1.83□□□□□ -2.12
R3HDM4Q96D70 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
R3HDM4Q96D70 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.83□□□□□ -2.12
R3HDM4Q96D70 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.83□□□□□ -2.12
R3HDM4Q96D70 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
R3HDM4Q96D70 RNU6-1292P-201ENST00000383856 107 ntBASIC1.82□□□□□ -2.12
R3HDM4Q96D70 MIR194-1-201ENST00000384892 85 ntBASIC1.82□□□□□ -2.12
R3HDM4Q96D70 MIR624-201ENST00000385217 97 ntBASIC1.82□□□□□ -2.12
R3HDM4Q96D70 MIR513C-201ENST00000401352 84 ntBASIC1.82□□□□□ -2.12
R3HDM4Q96D70 AL161935.2-201ENST00000414627 60 ntBASIC1.82□□□□□ -2.12
R3HDM4Q96D70 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.82□□□□□ -2.12
R3HDM4Q96D70 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.82□□□□□ -2.12
R3HDM4Q96D70 RNU7-12P-201ENST00000516030 62 ntBASIC1.82□□□□□ -2.12
R3HDM4Q96D70 RNU7-25P-201ENST00000516544 62 ntBASIC1.82□□□□□ -2.12
R3HDM4Q96D70 RNU6-789P-201ENST00000517105 102 ntBASIC1.82□□□□□ -2.12
R3HDM4Q96D70 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
R3HDM4Q96D70 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
R3HDM4Q96D70 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
R3HDM4Q96D70 RNU6-203P-201ENST00000384038 104 ntBASIC1.81□□□□□ -2.12
R3HDM4Q96D70 Y_RNA.497-201ENST00000384447 98 ntBASIC1.81□□□□□ -2.12
R3HDM4Q96D70 Y_RNA.547-201ENST00000384654 119 ntBASIC1.81□□□□□ -2.12
R3HDM4Q96D70 MIR676-201ENST00000390702 67 ntBASIC1.81□□□□□ -2.12
R3HDM4Q96D70 RNA5SP127-201ENST00000411051 133 ntBASIC1.81□□□□□ -2.12
R3HDM4Q96D70 CYCSP49-201ENST00000420810 319 ntBASIC1.81□□□□□ -2.12
R3HDM4Q96D70 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.81□□□□□ -2.12
R3HDM4Q96D70 RNU6-830P-201ENST00000516353 107 ntBASIC1.81□□□□□ -2.12
R3HDM4Q96D70 MIR3129-201ENST00000581095 76 ntBASIC1.81□□□□□ -2.12
R3HDM4Q96D70 MIR4769-201ENST00000584126 77 ntBASIC1.81□□□□□ -2.12
R3HDM4Q96D70 AL096840.1-201ENST00000603287 93 ntBASIC1.81□□□□□ -2.12
R3HDM4Q96D70 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
R3HDM4Q96D70 RNU6-1123P-201ENST00000362347 106 ntBASIC1.8□□□□□ -2.12
R3HDM4Q96D70 SNORD38C-201ENST00000384381 69 ntBASIC1.8□□□□□ -2.12
R3HDM4Q96D70 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
R3HDM4Q96D70 RNA5SP272-201ENST00000516095 111 ntBASIC1.8□□□□□ -2.12
R3HDM4Q96D70 AP001485.1-201ENST00000604799 199 ntBASIC1.8□□□□□ -2.12
R3HDM4Q96D70 AL627230.6-201ENST00000611129 280 ntBASIC1.8□□□□□ -2.12
R3HDM4Q96D70 AC009831.4-201ENST00000620744 325 ntBASIC1.8□□□□□ -2.12
R3HDM4Q96D70 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
R3HDM4Q96D70 AC010332.2-201ENST00000613083 1904 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
R3HDM4Q96D70 RNU6-661P-201ENST00000362409 107 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 Y_RNA.420-201ENST00000384043 110 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 MIR452-201ENST00000385020 85 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 SNORD77.3-201ENST00000391113 65 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 RNU6-257P-201ENST00000410238 98 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 AC015922.2-201ENST00000435593 184 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 AF228730.3-201ENST00000436691 102 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 AC093850.1-201ENST00000454121 251 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 DEFB122-202ENST00000569013 197 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 MIR4299-201ENST00000577899 72 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 MIR4287-201ENST00000579398 78 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 MIR4713-201ENST00000582691 75 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 MIR3935-201ENST00000583472 104 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 AC131055.1-201ENST00000584626 316 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 MIR6132-201ENST00000622083 109 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 SNORD3E-202ENST00000627253 216 ntBASIC1.79□□□□□ -2.12
R3HDM4Q96D70 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
R3HDM4Q96D70 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.78□□□□□ -2.12
R3HDM4Q96D70 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
R3HDM4Q96D70 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
R3HDM4Q96D70 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
R3HDM4Q96D70 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
R3HDM4Q96D70 SNORD113-1-201ENST00000365321 69 ntBASIC1.78□□□□□ -2.12
R3HDM4Q96D70 RNU6-439P-201ENST00000384188 106 ntBASIC1.78□□□□□ -2.12
R3HDM4Q96D70 MIR221-201ENST00000385135 110 ntBASIC1.78□□□□□ -2.12
R3HDM4Q96D70 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
R3HDM4Q96D70 Y_RNA.584-201ENST00000391090 114 ntBASIC1.78□□□□□ -2.12
R3HDM4Q96D70 Y_RNA.586-201ENST00000391146 98 ntBASIC1.78□□□□□ -2.12
R3HDM4Q96D70 RNU6-460P-201ENST00000391158 108 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms