Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RPS26P48-201ENST00000491713 339 ntBASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 AC011406.1-201ENST00000512440 370 ntBASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 RNU7-172P-201ENST00000517125 64 ntBASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 RNU6-1270P-201ENST00000517128 108 ntBASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 MIR4438-201ENST00000585271 93 ntBASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 AL355297.2-201ENST00000604792 129 ntBASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 AL589743.1-201ENST00000551932 2712 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 Y_RNA.466-201ENST00000384294 113 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 SNORD78.1-201ENST00000390866 65 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 SNORA48.3-201ENST00000391081 134 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 AC008134.1-201ENST00000420943 193 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 RNU6-240P-201ENST00000516098 97 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 Y_RNA.666-201ENST00000516187 112 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 RNU6-904P-201ENST00000516206 101 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 SNORA31.11-201ENST00000516528 139 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 MALAT1.1-201ENST00000618249 95 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 Y_RNA.818-201ENST00000618813 71 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 AC134878.1-201ENST00000619901 243 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 AC090517.3-201ENST00000625170 141 ntBASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
SH3RF3Q8TEJ3 AC092881.1-201ENST00000638218 2733 ntBASIC2.49□□□□□ -2.01
SH3RF3Q8TEJ3 Y_RNA.78-201ENST00000362970 110 ntBASIC2.49□□□□□ -2.01
SH3RF3Q8TEJ3 RNU6-820P-201ENST00000384273 107 ntBASIC2.49□□□□□ -2.01
SH3RF3Q8TEJ3 MIR518F-201ENST00000384973 87 ntBASIC2.49□□□□□ -2.01
SH3RF3Q8TEJ3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.49□□□□□ -2.01
SH3RF3Q8TEJ3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.49□□□□□ -2.01
SH3RF3Q8TEJ3 AC068339.1-201ENST00000526965 141 ntBASIC2.49□□□□□ -2.01
SH3RF3Q8TEJ3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.49□□□□□ -2.01
SH3RF3Q8TEJ3 AC245884.12-201ENST00000615364 59 ntBASIC2.49□□□□□ -2.01
SH3RF3Q8TEJ3 MIR1248-201ENST00000629190 106 ntBASIC2.49□□□□□ -2.01
SH3RF3Q8TEJ3 AP006437.1-201ENST00000641440 3685 ntBASIC2.48□□□□□ -2.01
SH3RF3Q8TEJ3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.48□□□□□ -2.01
SH3RF3Q8TEJ3 Y_RNA.220-201ENST00000364244 109 ntBASIC2.48□□□□□ -2.01
SH3RF3Q8TEJ3 Y_RNA.342-201ENST00000365352 113 ntBASIC2.48□□□□□ -2.01
SH3RF3Q8TEJ3 Y_RNA.344-201ENST00000365381 112 ntBASIC2.48□□□□□ -2.01
SH3RF3Q8TEJ3 MIR450A2-201ENST00000385022 100 ntBASIC2.48□□□□□ -2.01
SH3RF3Q8TEJ3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SH3RF3Q8TEJ3 AL591806.2-201ENST00000433122 173 ntBASIC2.48□□□□□ -2.01
SH3RF3Q8TEJ3 RNY4P20-201ENST00000516678 93 ntBASIC2.48□□□□□ -2.01
SH3RF3Q8TEJ3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.48□□□□□ -2.01
SH3RF3Q8TEJ3 AC008507.4-201ENST00000585464 127 ntBASIC2.48□□□□□ -2.01
SH3RF3Q8TEJ3 JPX_2.1-201ENST00000614161 69 ntBASIC2.48□□□□□ -2.01
SH3RF3Q8TEJ3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 RNU6-349P-201ENST00000362402 107 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 RNY4P6-201ENST00000363667 96 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 Y_RNA.219-201ENST00000364232 113 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 Y_RNA.253-201ENST00000364562 112 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 MIR95-201ENST00000385072 81 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 MIR561-201ENST00000385216 97 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 AC009238.1-201ENST00000442165 424 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 AC009237.6-201ENST00000446969 424 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 SNORA48.11-201ENST00000517015 89 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 RNU7-128P-201ENST00000517247 62 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 MIR5197-201ENST00000583721 112 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 MIR5002-201ENST00000584713 97 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 SNORD115-40-201ENST00000606510 82 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 AC080100.1-201ENST00000624239 5356 ntBASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SH3RF3Q8TEJ3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.46□□□□□ -2.02
SH3RF3Q8TEJ3 MIR494-201ENST00000349529 81 ntBASIC2.46□□□□□ -2.02
SH3RF3Q8TEJ3 MIR340-201ENST00000362125 95 ntBASIC2.46□□□□□ -2.02
SH3RF3Q8TEJ3 RNU6-228P-201ENST00000362700 106 ntBASIC2.46□□□□□ -2.02
SH3RF3Q8TEJ3 RNU1-96P-201ENST00000364163 162 ntBASIC2.46□□□□□ -2.02
SH3RF3Q8TEJ3 Y_RNA.593-201ENST00000410292 98 ntBASIC2.46□□□□□ -2.02
SH3RF3Q8TEJ3 RPS3AP1-201ENST00000413190 320 ntBASIC2.46□□□□□ -2.02
SH3RF3Q8TEJ3 HMGN2P18-201ENST00000450680 270 ntBASIC2.46□□□□□ -2.02
SH3RF3Q8TEJ3 HMGN1P7-201ENST00000491722 313 ntBASIC2.46□□□□□ -2.02
SH3RF3Q8TEJ3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.46□□□□□ -2.02
SH3RF3Q8TEJ3 RNU6-693P-201ENST00000516134 107 ntBASIC2.46□□□□□ -2.02
SH3RF3Q8TEJ3 RNU2-34P-201ENST00000516534 121 ntBASIC2.46□□□□□ -2.02
SH3RF3Q8TEJ3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
SH3RF3Q8TEJ3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 MIR302B-201ENST00000362188 73 ntBASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 RNU6-1104P-201ENST00000384723 104 ntBASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 RNA5SP225-201ENST00000410874 135 ntBASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 SNRPGP10-201ENST00000432323 225 ntBASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 AC109327.2-201ENST00000448339 378 ntBASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 RNA5SP57-201ENST00000459463 123 ntBASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 AC026421.1-201ENST00000519101 163 ntBASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 AC084364.2-201ENST00000546924 395 ntBASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 SNORD14A-201ENST00000606526 91 ntBASIC2.45□□□□□ -2.02
SH3RF3Q8TEJ3 RNU6-414P-201ENST00000363705 104 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms