Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL627390.1-201ENST00000396055 340 ntBASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 BTF3P4-201ENST00000418852 495 ntBASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 SNORA31.4-201ENST00000516049 129 ntBASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 MIR3945-201ENST00000581853 98 ntBASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 MIR4777-201ENST00000583710 86 ntBASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 ZNF861P-201ENST00000588126 639 ntBASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 AC110079.1-202ENST00000635213 138 ntBASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-60P-201ENST00000364792 103 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 FO393413.1-201ENST00000402892 195 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 RN7SKP200-201ENST00000410564 320 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-402P-201ENST00000410678 103 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 MRPL35P3-201ENST00000421557 364 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 AL512326.2-201ENST00000426359 151 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 RNU7-94P-201ENST00000459576 63 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 AC003982.1-202ENST00000469928 248 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 RN7SL297P-201ENST00000483161 293 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 SNORA31.26-201ENST00000517250 137 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 AC004812.1-201ENST00000540773 146 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 MIR4666B-201ENST00000578142 81 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 MIR3199-1-201ENST00000582434 88 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 AL513534.2-201ENST00000603836 250 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 AC064859.1-201ENST00000624741 174 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 MIR7157-201ENST00000635801 60 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 AC091304.10-201ENST00000641554 121 ntBASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHKBP1Q8TBC3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
SHKBP1Q8TBC3 Y_RNA.190-201ENST00000363964 101 ntBASIC2.83□□□□□ -1.96
SHKBP1Q8TBC3 SNORA8-201ENST00000384574 139 ntBASIC2.83□□□□□ -1.96
SHKBP1Q8TBC3 SNORA80E-201ENST00000384744 137 ntBASIC2.83□□□□□ -1.96
SHKBP1Q8TBC3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.83□□□□□ -1.96
SHKBP1Q8TBC3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.83□□□□□ -1.96
SHKBP1Q8TBC3 RNU6-857P-201ENST00000515893 110 ntBASIC2.83□□□□□ -1.96
SHKBP1Q8TBC3 SNORA48.11-201ENST00000517015 89 ntBASIC2.83□□□□□ -1.96
SHKBP1Q8TBC3 MIR6817-201ENST00000615588 66 ntBASIC2.83□□□□□ -1.96
SHKBP1Q8TBC3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SHKBP1Q8TBC3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
SHKBP1Q8TBC3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 MIR342-201ENST00000362212 99 ntBASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 RNA5SP68-201ENST00000363885 119 ntBASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 RNU6-219P-201ENST00000364728 107 ntBASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 Y_RNA.313-201ENST00000365095 103 ntBASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 SNORD115-35-201ENST00000365122 82 ntBASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 SNORD116-22-201ENST00000384430 92 ntBASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 RNA5SP323-201ENST00000391094 133 ntBASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 SNX2P2-201ENST00000424553 323 ntBASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 RNU7-171P-201ENST00000459581 62 ntBASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 RNU6-267P-201ENST00000516714 103 ntBASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 MIR4435-1-201ENST00000582552 80 ntBASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 CTSLP2-204ENST00000629029 392 ntBASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.82□□□□□ -1.96
SHKBP1Q8TBC3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 SNORD115-13-201ENST00000363358 82 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 SNORD115-16-201ENST00000363887 82 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 SNORD115-1-201ENST00000364961 82 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 SNORA18-201ENST00000384416 132 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 RNU6-679P-201ENST00000391003 106 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 AL022718.1-201ENST00000412004 84 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 AL035398.1-201ENST00000430869 322 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 AL513328.1-201ENST00000446460 224 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 CYP2C59P-201ENST00000457790 269 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 RNU2-11P-201ENST00000459191 187 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 RNA5SP148-201ENST00000516527 94 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 AC024995.1-201ENST00000523014 93 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 AL356280.1-201ENST00000603614 379 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 MIR7515-201ENST00000637837 67 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 AC108206.1-201ENST00000570186 4159 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 MAPK10-322ENST00000641485 4530 ntBASIC2.81□□□□□ -1.96
SHKBP1Q8TBC3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SHKBP1Q8TBC3 MIR26A1-201ENST00000362205 77 ntBASIC2.8□□□□□ -1.96
SHKBP1Q8TBC3 Y_RNA.96-201ENST00000363092 109 ntBASIC2.8□□□□□ -1.96
SHKBP1Q8TBC3 Y_RNA.377-201ENST00000365644 108 ntBASIC2.8□□□□□ -1.96
SHKBP1Q8TBC3 SNORA26.7-201ENST00000391288 122 ntBASIC2.8□□□□□ -1.96
SHKBP1Q8TBC3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.8□□□□□ -1.96
SHKBP1Q8TBC3 AL163195.1-201ENST00000496941 348 ntBASIC2.8□□□□□ -1.96
SHKBP1Q8TBC3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.8□□□□□ -1.96
SHKBP1Q8TBC3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SHKBP1Q8TBC3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.8□□□□□ -1.96
SHKBP1Q8TBC3 Y_RNA.95-201ENST00000363079 95 ntBASIC2.79□□□□□ -1.96
SHKBP1Q8TBC3 SNORD45B-201ENST00000364617 72 ntBASIC2.79□□□□□ -1.96
SHKBP1Q8TBC3 U8.9-201ENST00000365667 134 ntBASIC2.79□□□□□ -1.96
SHKBP1Q8TBC3 Y_RNA.437-201ENST00000384113 113 ntBASIC2.79□□□□□ -1.96
SHKBP1Q8TBC3 SNORA27-201ENST00000384323 126 ntBASIC2.79□□□□□ -1.96
SHKBP1Q8TBC3 MIR515-2-201ENST00000384883 83 ntBASIC2.79□□□□□ -1.96
SHKBP1Q8TBC3 MIR515-1-201ENST00000384884 83 ntBASIC2.79□□□□□ -1.96
SHKBP1Q8TBC3 MIR592-201ENST00000384959 97 ntBASIC2.79□□□□□ -1.96
SHKBP1Q8TBC3 POLR2J4-204ENST00000418424 324 ntBASIC2.79□□□□□ -1.96
SHKBP1Q8TBC3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms