Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MIR7157-201ENST00000635801 60 ntBASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SNIP1Q8TAD8 AL442644.1-201ENST00000454390 3105 ntBASIC3.32□□□□□ -1.88
SNIP1Q8TAD8 SNORA80A-201ENST00000363922 136 ntBASIC3.32□□□□□ -1.88
SNIP1Q8TAD8 SNORA70.7-201ENST00000384159 133 ntBASIC3.32□□□□□ -1.88
SNIP1Q8TAD8 MIR592-201ENST00000384959 97 ntBASIC3.32□□□□□ -1.88
SNIP1Q8TAD8 MIR181B2-201ENST00000385004 89 ntBASIC3.32□□□□□ -1.88
SNIP1Q8TAD8 RNA5SP109-201ENST00000391010 116 ntBASIC3.32□□□□□ -1.88
SNIP1Q8TAD8 AC006539.3-201ENST00000454258 129 ntBASIC3.32□□□□□ -1.88
SNIP1Q8TAD8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.32□□□□□ -1.88
SNIP1Q8TAD8 RNU6-667P-201ENST00000517186 102 ntBASIC3.32□□□□□ -1.88
SNIP1Q8TAD8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.32□□□□□ -1.88
SNIP1Q8TAD8 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 AC091152.2-201ENST00000591628 2569 ntBASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 SNORA1.2-201ENST00000365189 134 ntBASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 Y_RNA.370-201ENST00000365589 108 ntBASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 RNA5SP341-201ENST00000516261 117 ntBASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 MIR3134-201ENST00000579433 74 ntBASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 MIR4425-201ENST00000580572 84 ntBASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 AL356280.1-201ENST00000603614 379 ntBASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 U4.6-201ENST00000621618 127 ntBASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 SNORD3E-202ENST00000627253 216 ntBASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 MIR7515-201ENST00000637837 67 ntBASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNIP1Q8TAD8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNIP1Q8TAD8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNIP1Q8TAD8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNIP1Q8TAD8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.3□□□□□ -1.88
SNIP1Q8TAD8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNIP1Q8TAD8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNIP1Q8TAD8 Y_RNA.173-201ENST00000363776 113 ntBASIC3.3□□□□□ -1.88
SNIP1Q8TAD8 RNU6-342P-201ENST00000384521 104 ntBASIC3.3□□□□□ -1.88
SNIP1Q8TAD8 MIR591-201ENST00000385290 95 ntBASIC3.3□□□□□ -1.88
SNIP1Q8TAD8 MIR1236-201ENST00000408340 102 ntBASIC3.3□□□□□ -1.88
SNIP1Q8TAD8 RPS29P29-201ENST00000456396 171 ntBASIC3.3□□□□□ -1.88
SNIP1Q8TAD8 RNU6-917P-201ENST00000516294 104 ntBASIC3.3□□□□□ -1.88
SNIP1Q8TAD8 AC110079.1-202ENST00000635213 138 ntBASIC3.3□□□□□ -1.88
SNIP1Q8TAD8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 RNU6-624P-201ENST00000363411 107 ntBASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 RNU6-865P-201ENST00000364772 107 ntBASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 Y_RNA.448-201ENST00000384185 108 ntBASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 RNU6-301P-201ENST00000384277 107 ntBASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 RNU6-913P-201ENST00000390913 95 ntBASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 RNU6-519P-201ENST00000410590 108 ntBASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 IGKV2-26-201ENST00000518305 343 ntBASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 MIR5047-201ENST00000579212 100 ntBASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 MIR4672-201ENST00000583126 81 ntBASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 AL020996.3-201ENST00000606617 222 ntBASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 MIR8054-201ENST00000620877 86 ntBASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 AC008163.1-202ENST00000636004 2889 ntBASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.29□□□□□ -1.88
SNIP1Q8TAD8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
SNIP1Q8TAD8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SNIP1Q8TAD8 SCARNA18B-201ENST00000458806 135 ntBASIC3.28□□□□□ -1.88
SNIP1Q8TAD8 MIR4276-201ENST00000584832 70 ntBASIC3.28□□□□□ -1.88
SNIP1Q8TAD8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.28□□□□□ -1.88
SNIP1Q8TAD8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.28□□□□□ -1.88
SNIP1Q8TAD8 GABRG2-229ENST00000641017 3628 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 RNU4-32P-201ENST00000363404 141 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 Y_RNA.168-201ENST00000363740 102 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 RNU6-480P-201ENST00000384332 107 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 RNU4-47P-201ENST00000410876 114 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 AC087499.7-201ENST00000441958 109 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 RNU6-579P-201ENST00000516879 102 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 RNU7-35P-201ENST00000517174 62 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 AC006023.1-201ENST00000603944 259 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 AL355297.2-201ENST00000604792 129 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 SNORA28-201ENST00000606769 126 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 MIR7106-201ENST00000612419 65 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 AC012676.2-201ENST00000619258 186 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNIP1Q8TAD8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 Y_RNA.99-201ENST00000363138 105 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 RNA5SP138-201ENST00000365098 114 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 SNORA24-201ENST00000384096 131 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 RNU6-411P-201ENST00000384451 107 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 MIR184-201ENST00000384962 84 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 MIR516B2-201ENST00000385190 85 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 MIR561-201ENST00000385216 97 ntBASIC3.26□□□□□ -1.89
SNIP1Q8TAD8 SNORA40.18-201ENST00000391200 128 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 244.2 ms