Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 IGKV2-26-201ENST00000518305 343 ntBASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 AC022523.2-201ENST00000561045 150 ntBASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 MIR5582-201ENST00000579697 68 ntBASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 HSPE1P19-201ENST00000603327 295 ntBASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 AL161431.1-201ENST00000618966 4205 ntBASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 RNU4-16P-201ENST00000364737 141 ntBASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 Y_RNA.299-201ENST00000364973 94 ntBASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 Y_RNA.348-201ENST00000365403 103 ntBASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 RNU6-1319P-201ENST00000390855 104 ntBASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 RNU6-747P-201ENST00000390928 104 ntBASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 RNU6-241P-201ENST00000391148 104 ntBASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 RNU6-177P-201ENST00000411257 104 ntBASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 PGBD4P5-201ENST00000445958 426 ntBASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 AC099513.1-201ENST00000490423 301 ntBASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 AL162726.3-218ENST00000636401 95 ntBASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 AC092881.1-201ENST00000638218 2733 ntBASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 ICE2P2-201ENST00000483823 2787 ntBASIC2.94□□□□□ -1.94
DEPDC4Q8N2C3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
DEPDC4Q8N2C3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.93□□□□□ -1.94
DEPDC4Q8N2C3 MIR516B2-201ENST00000385190 85 ntBASIC2.93□□□□□ -1.94
DEPDC4Q8N2C3 MIR1912-201ENST00000410389 80 ntBASIC2.93□□□□□ -1.94
DEPDC4Q8N2C3 RNA5SP261-201ENST00000410536 106 ntBASIC2.93□□□□□ -1.94
DEPDC4Q8N2C3 RNA5SP344-201ENST00000411081 104 ntBASIC2.93□□□□□ -1.94
DEPDC4Q8N2C3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.93□□□□□ -1.94
DEPDC4Q8N2C3 RN7SL499P-201ENST00000481141 276 ntBASIC2.93□□□□□ -1.94
DEPDC4Q8N2C3 RPS23P4-201ENST00000487908 423 ntBASIC2.93□□□□□ -1.94
DEPDC4Q8N2C3 MIR3152-201ENST00000579801 74 ntBASIC2.93□□□□□ -1.94
DEPDC4Q8N2C3 Y_RNA.818-201ENST00000618813 71 ntBASIC2.93□□□□□ -1.94
DEPDC4Q8N2C3 MIR6733-201ENST00000635723 61 ntBASIC2.93□□□□□ -1.94
DEPDC4Q8N2C3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.92□□□□□ -1.94
DEPDC4Q8N2C3 MIR424-201ENST00000362227 98 ntBASIC2.92□□□□□ -1.94
DEPDC4Q8N2C3 RNU6-905P-201ENST00000384434 107 ntBASIC2.92□□□□□ -1.94
DEPDC4Q8N2C3 Y_RNA.531-201ENST00000384589 121 ntBASIC2.92□□□□□ -1.94
DEPDC4Q8N2C3 POLR2J4-204ENST00000418424 324 ntBASIC2.92□□□□□ -1.94
DEPDC4Q8N2C3 AL135938.1-201ENST00000443141 297 ntBASIC2.92□□□□□ -1.94
DEPDC4Q8N2C3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.92□□□□□ -1.94
DEPDC4Q8N2C3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.92□□□□□ -1.94
DEPDC4Q8N2C3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 RNU6-661P-201ENST00000362409 107 ntBASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 RNA5SP274-201ENST00000410484 108 ntBASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 RPS29P29-201ENST00000456396 171 ntBASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 SNORA72.7-201ENST00000516349 94 ntBASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 AC004812.1-201ENST00000540773 146 ntBASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 MIR4529-201ENST00000578110 78 ntBASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 SNORD14A-201ENST00000606526 91 ntBASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 MIR4679-1-201ENST00000637619 75 ntBASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
DEPDC4Q8N2C3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.9□□□□□ -1.94
DEPDC4Q8N2C3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
DEPDC4Q8N2C3 SNORD115-19-201ENST00000363098 82 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 SNORD115-18-201ENST00000363293 82 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 SNORD115-17-201ENST00000364612 82 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 RNA5SP100-201ENST00000410903 110 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 RNA5SP59-201ENST00000410922 110 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 AC093850.1-201ENST00000454121 251 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 SNORA40.13-201ENST00000516379 120 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 RNU7-6P-201ENST00000516845 62 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 RNU6-158P-201ENST00000517104 100 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 DNAJC19P9-201ENST00000555084 351 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 MIR4325-201ENST00000583049 90 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 SNORD3E-202ENST00000627253 216 ntBASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
DEPDC4Q8N2C3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 SNORD115-2-201ENST00000362842 82 ntBASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 RNU6-640P-201ENST00000363693 105 ntBASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 SNORD115-20-201ENST00000365099 82 ntBASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 RNU1-52P-201ENST00000384190 164 ntBASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 RNU6-1067P-201ENST00000384752 107 ntBASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 RNU6-360P-201ENST00000390944 104 ntBASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 RNU4-47P-201ENST00000410876 114 ntBASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 RNA5SP450-201ENST00000411206 102 ntBASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 AC105272.1-201ENST00000438604 198 ntBASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 RNU7-73P-201ENST00000458743 63 ntBASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 SNORD123-201ENST00000459473 70 ntBASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 SNORA31.25-201ENST00000517242 134 ntBASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 MIR5680-201ENST00000577577 84 ntBASIC2.89□□□□□ -1.95
DEPDC4Q8N2C3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
DEPDC4Q8N2C3 Y_RNA.430-201ENST00000384081 110 ntBASIC2.88□□□□□ -1.95
DEPDC4Q8N2C3 AL512326.2-201ENST00000426359 151 ntBASIC2.88□□□□□ -1.95
DEPDC4Q8N2C3 RNU7-67P-201ENST00000459003 62 ntBASIC2.88□□□□□ -1.95
DEPDC4Q8N2C3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.88□□□□□ -1.95
DEPDC4Q8N2C3 EIF4BP1-201ENST00000554881 351 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms