Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 RNA5SP168-201ENST00000516642 112 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 RNA5SP481-201ENST00000516814 122 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-789P-201ENST00000517105 102 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-365P-201ENST00000517113 106 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-1270P-201ENST00000517128 108 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 AC087685.1-201ENST00000587507 141 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 AC078899.2-201ENST00000595282 212 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 AC120024.3-201ENST00000603167 156 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
SFTPA1Q8IWL2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 Y_RNA.393-201ENST00000383936 102 ntBASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 MIR144-201ENST00000384886 86 ntBASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 SNORA26-201ENST00000391286 122 ntBASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 TMSB4XP3-201ENST00000445144 114 ntBASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 Y_RNA.676-201ENST00000516393 96 ntBASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 SNORA25.15-201ENST00000516487 89 ntBASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-250P-201ENST00000516958 103 ntBASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 AC021506.2-201ENST00000612354 169 ntBASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 MIR203B-201ENST00000636080 86 ntBASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 MIR6844-201ENST00000637122 62 ntBASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.85□□□□□ -2.11
SFTPA1Q8IWL2 Y_RNA.4-201ENST00000362333 112 ntBASIC1.84□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-661P-201ENST00000362409 107 ntBASIC1.84□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-442P-201ENST00000383968 104 ntBASIC1.84□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-424P-201ENST00000384367 105 ntBASIC1.84□□□□□ -2.11
SFTPA1Q8IWL2 Y_RNA.497-201ENST00000384447 98 ntBASIC1.84□□□□□ -2.11
SFTPA1Q8IWL2 RNU6-588P-201ENST00000410281 105 ntBASIC1.84□□□□□ -2.11
SFTPA1Q8IWL2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.84□□□□□ -2.11
SFTPA1Q8IWL2 AL160236.1-201ENST00000556317 195 ntBASIC1.84□□□□□ -2.11
SFTPA1Q8IWL2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.84□□□□□ -2.11
SFTPA1Q8IWL2 MIR4303-201ENST00000581299 66 ntBASIC1.84□□□□□ -2.11
SFTPA1Q8IWL2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.84□□□□□ -2.11
SFTPA1Q8IWL2 AC132825.6-201ENST00000638861 357 ntBASIC1.84□□□□□ -2.11
SFTPA1Q8IWL2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
SFTPA1Q8IWL2 Y_RNA.66-201ENST00000362862 102 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-978P-201ENST00000364371 103 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-1082P-201ENST00000364574 107 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 SNORD61-201ENST00000384252 73 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 Y_RNA.568-201ENST00000384742 113 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 AC099513.1-201ENST00000490423 301 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 CYCTP-201ENST00000504253 315 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 RNU7-12P-201ENST00000516030 62 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-693P-201ENST00000516134 107 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-504P-201ENST00000516568 104 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-126P-201ENST00000516685 103 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 RNA5SP82-201ENST00000516707 92 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 MIR4287-201ENST00000579398 78 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 MIR3683-201ENST00000580847 82 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 AC097639.2-201ENST00000603159 172 ntBASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SFTPA1Q8IWL2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-268P-201ENST00000364174 107 ntBASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 Y_RNA.343-201ENST00000365354 112 ntBASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 RNA5SP37-201ENST00000365420 130 ntBASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 SNORA6-201ENST00000384033 151 ntBASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 RNU4-62P-201ENST00000410125 130 ntBASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 AL606753.1-201ENST00000427435 87 ntBASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 AC093850.1-201ENST00000454121 251 ntBASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 AC007751.1-201ENST00000529260 376 ntBASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 AC112693.2-201ENST00000556538 232 ntBASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 MIR548X2-201ENST00000579776 100 ntBASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.82□□□□□ -2.12
SFTPA1Q8IWL2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 SNORA25.7-201ENST00000364375 127 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 Y_RNA.242-201ENST00000364473 110 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 SNORD50.2-201ENST00000365465 70 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 SNORA1-201ENST00000384107 130 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-460P-201ENST00000391158 108 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 MIR891A-201ENST00000401237 79 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 MIR513C-201ENST00000401352 84 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 MIR548O-201ENST00000408583 114 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-257P-201ENST00000410238 98 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 BTF3P4-201ENST00000418852 495 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 SNRPGP13-201ENST00000442212 177 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 HMGN2P32-201ENST00000444648 269 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 MIR4498-201ENST00000577599 66 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 MIR4778-201ENST00000577635 80 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 AC091895.1-201ENST00000624494 256 ntBASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SFTPA1Q8IWL2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 Y_RNA.336-201ENST00000365307 109 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-597P-201ENST00000365620 102 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-203P-201ENST00000384038 104 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-439P-201ENST00000384188 106 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 SNORA75.5-201ENST00000391291 81 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 RPL30P13-201ENST00000418873 348 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 SNRPGP14-201ENST00000435400 219 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 RNU7-197P-201ENST00000458836 62 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 329.6 ms