Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 RNU6-1041P-201ENST00000516254 102 ntBASIC2.4□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-830P-201ENST00000516353 107 ntBASIC2.4□□□□□ -2.03
LIMS2Q7Z4I7 RNY4P20-201ENST00000516678 93 ntBASIC2.4□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-762P-201ENST00000517107 102 ntBASIC2.4□□□□□ -2.03
LIMS2Q7Z4I7 MIR5009-201ENST00000578736 100 ntBASIC2.4□□□□□ -2.03
LIMS2Q7Z4I7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.4□□□□□ -2.03
LIMS2Q7Z4I7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
LIMS2Q7Z4I7 AP006437.1-201ENST00000641440 3685 ntBASIC2.4□□□□□ -2.03
LIMS2Q7Z4I7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LIMS2Q7Z4I7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 AC092881.1-201ENST00000638218 2733 ntBASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 Y_RNA.78-201ENST00000362970 110 ntBASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 U8.5-201ENST00000364528 136 ntBASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-1189P-201ENST00000383958 107 ntBASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 Y_RNA.558-201ENST00000384685 113 ntBASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 MIR548O-201ENST00000408583 114 ntBASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 EDDM3CP-201ENST00000415977 425 ntBASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 AL049830.1-201ENST00000468034 425 ntBASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 RNA5SP200-201ENST00000516360 103 ntBASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-158P-201ENST00000517104 100 ntBASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 AC068339.1-201ENST00000526965 141 ntBASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 AP002004.2-201ENST00000531656 154 ntBASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.39□□□□□ -2.03
LIMS2Q7Z4I7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 Y_RNA.37-201ENST00000362606 108 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 SNORA33-201ENST00000363664 130 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 Y_RNA.213-201ENST00000364178 111 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 SNORD114-6-201ENST00000364393 72 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 Y_RNA.298-201ENST00000364960 107 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 RNU1-51P-201ENST00000365345 176 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 SNORA2.2-201ENST00000365473 135 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 SNORA6-201ENST00000384033 151 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 MIR590-201ENST00000385008 97 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 MIR221-201ENST00000385135 110 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 SNORA26.2-201ENST00000390922 122 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 RNA5SP425-201ENST00000410336 112 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-938P-201ENST00000411285 103 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 RN7SKP192-201ENST00000411291 327 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 RNU1-131P-201ENST00000458943 161 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 RNU1-142P-201ENST00000516682 145 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 Y_RNA.818-201ENST00000618813 71 ntBASIC2.38□□□□□ -2.03
LIMS2Q7Z4I7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-268P-201ENST00000364174 107 ntBASIC2.37□□□□□ -2.03
LIMS2Q7Z4I7 Y_RNA.547-201ENST00000384654 119 ntBASIC2.37□□□□□ -2.03
LIMS2Q7Z4I7 MIR561-201ENST00000385216 97 ntBASIC2.37□□□□□ -2.03
LIMS2Q7Z4I7 RNU7-25P-201ENST00000516544 62 ntBASIC2.37□□□□□ -2.03
LIMS2Q7Z4I7 AC024995.1-201ENST00000523014 93 ntBASIC2.37□□□□□ -2.03
LIMS2Q7Z4I7 IGKV3-31-201ENST00000523109 329 ntBASIC2.37□□□□□ -2.03
LIMS2Q7Z4I7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.37□□□□□ -2.03
LIMS2Q7Z4I7 AC080100.1-201ENST00000624239 5356 ntBASIC2.37□□□□□ -2.03
LIMS2Q7Z4I7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 SNORD115-28-201ENST00000363931 81 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-690P-201ENST00000365242 106 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 Y_RNA.344-201ENST00000365381 112 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 Y_RNA.440-201ENST00000384120 114 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 SNORA70B-201ENST00000384210 135 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-1104P-201ENST00000384723 104 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 SRIP3-201ENST00000413200 219 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 MTATP8P2-201ENST00000435212 202 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 RNU7-94P-201ENST00000459576 63 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 AC023141.11-201ENST00000508864 202 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-904P-201ENST00000516206 101 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-970P-201ENST00000516312 107 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-109P-201ENST00000516364 107 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-184P-201ENST00000516514 107 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-667P-201ENST00000517186 102 ntBASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LIMS2Q7Z4I7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-414P-201ENST00000363705 104 ntBASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 RNU6-442P-201ENST00000383968 104 ntBASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 MIR515-2-201ENST00000384883 83 ntBASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 MIR515-1-201ENST00000384884 83 ntBASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 SNORA19.1-201ENST00000410656 129 ntBASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 AC003685.2-201ENST00000422795 395 ntBASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 CKS1BP2-201ENST00000497342 240 ntBASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 SNORD36C-201ENST00000516733 66 ntBASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 AC084364.2-201ENST00000546924 395 ntBASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 AC022217.4-201ENST00000604389 163 ntBASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 AC021443.1-201ENST00000604478 211 ntBASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 AL137847.3-201ENST00000611521 109 ntBASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LIMS2Q7Z4I7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LIMS2Q7Z4I7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.34□□□□□ -2.03
LIMS2Q7Z4I7 RNY1P6-201ENST00000384193 109 ntBASIC2.34□□□□□ -2.03
LIMS2Q7Z4I7 SNORA48.3-201ENST00000391081 134 ntBASIC2.34□□□□□ -2.03
LIMS2Q7Z4I7 RNU2-63P-201ENST00000410792 194 ntBASIC2.34□□□□□ -2.03
LIMS2Q7Z4I7 AC009238.1-201ENST00000442165 424 ntBASIC2.34□□□□□ -2.03
LIMS2Q7Z4I7 AC009237.6-201ENST00000446969 424 ntBASIC2.34□□□□□ -2.03
LIMS2Q7Z4I7 TRBV12-1-201ENST00000479785 344 ntBASIC2.34□□□□□ -2.03
LIMS2Q7Z4I7 AL163195.1-201ENST00000496941 348 ntBASIC2.34□□□□□ -2.03
LIMS2Q7Z4I7 SUMO2P16-201ENST00000519475 264 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 291.3 ms