Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SNORD115-27-201ENST00000364430 82 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 MIR592-201ENST00000384959 97 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 RNU2-63P-201ENST00000410792 194 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 S100A11P2-201ENST00000467589 312 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 UBL5P1-201ENST00000507979 193 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 AC090821.2-201ENST00000523552 176 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 RNU6-86P-201ENST00000606534 107 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 AL353149.1-201ENST00000610667 244 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 MIR7106-201ENST00000612419 65 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 AC108206.1-201ENST00000570186 4159 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 RNU6-1313P-201ENST00000362622 102 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 Y_RNA.510-201ENST00000384511 114 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 MIR95-201ENST00000385072 81 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 Y_RNA.609-201ENST00000410669 89 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 AC090844.1-201ENST00000422019 156 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 RNU7-96P-201ENST00000459535 64 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 RNA5SP33-201ENST00000516687 98 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 SCARNA11.3-201ENST00000517276 130 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 MIR5739-201ENST00000619803 80 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
FOXR1Q6PIV2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
FOXR1Q6PIV2 RNU6-633P-201ENST00000362612 103 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 RNU6-862P-201ENST00000362804 105 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 Y_RNA.299-201ENST00000364973 94 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 Y_RNA.565-201ENST00000384719 101 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 Y_RNA.607-201ENST00000410597 98 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 RNU4-47P-201ENST00000410876 114 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 AC022018.1-201ENST00000430685 241 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 RN7SL863P-201ENST00000462370 296 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 SEPT14P17-201ENST00000617978 177 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 AC096644.4-201ENST00000563417 2912 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-2-201ENST00000362842 82 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 SNORA80A-201ENST00000363922 136 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-20-201ENST00000365099 82 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 SNORA32-201ENST00000384072 121 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 Y_RNA.430-201ENST00000384081 110 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 MICF-203ENST00000432679 129 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 RPS12P2-201ENST00000439728 269 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 RNU7-94P-201ENST00000459576 63 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 AC018868.1-201ENST00000491307 315 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 AC108729.3-201ENST00000513484 108 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 RNU6-667P-201ENST00000517186 102 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 AC245060.5-201ENST00000610778 3293 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 AL161431.1-201ENST00000618966 4205 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 RNU6-1229P-201ENST00000364295 107 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 RNU6-1163P-201ENST00000364516 107 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 RNA5SP109-201ENST00000391010 116 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 RNU6-1307P-201ENST00000391012 103 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 RN7SKP111-201ENST00000410349 271 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 RNU6-1190P-201ENST00000410811 104 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 ATP5J2P3-201ENST00000451550 258 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 SNORA1.1-201ENST00000364671 133 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 RNU6-524P-201ENST00000384270 107 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 RNA5SP482-201ENST00000391269 118 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 SNORD88.1-201ENST00000408684 91 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 RN7SKP192-201ENST00000411291 327 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 SRIP3-201ENST00000413200 219 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 RN7SL20P-201ENST00000488827 297 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 CKS1BP2-201ENST00000497342 240 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 MIRLET7C-201ENST00000362160 84 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-34-201ENST00000362441 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-12-201ENST00000362583 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORA22.1-201ENST00000362701 134 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-29-201ENST00000362834 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-9-201ENST00000362912 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-21-201ENST00000362963 81 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-14-201ENST00000363090 81 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-41-201ENST00000363608 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-11-201ENST00000363616 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-5-201ENST00000363633 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-39-201ENST00000363694 82 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms