Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SNORD115-27-201ENST00000364430 82 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 MIR592-201ENST00000384959 97 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 RNU2-63P-201ENST00000410792 194 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 S100A11P2-201ENST00000467589 312 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 UBL5P1-201ENST00000507979 193 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 AC090821.2-201ENST00000523552 176 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 RNU6-86P-201ENST00000606534 107 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 AL353149.1-201ENST00000610667 244 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 MIR7106-201ENST00000612419 65 ntBASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
FOXR1Q6PIV2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 AC108206.1-201ENST00000570186 4159 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 RNU6-1313P-201ENST00000362622 102 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 Y_RNA.510-201ENST00000384511 114 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 MIR95-201ENST00000385072 81 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 Y_RNA.609-201ENST00000410669 89 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 AC090844.1-201ENST00000422019 156 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 RNU7-96P-201ENST00000459535 64 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 RNA5SP33-201ENST00000516687 98 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 SCARNA11.3-201ENST00000517276 130 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 MIR5739-201ENST00000619803 80 ntBASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
FOXR1Q6PIV2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
FOXR1Q6PIV2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
FOXR1Q6PIV2 RNU6-633P-201ENST00000362612 103 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 RNU6-862P-201ENST00000362804 105 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 Y_RNA.299-201ENST00000364973 94 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 Y_RNA.565-201ENST00000384719 101 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 Y_RNA.607-201ENST00000410597 98 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 RNU4-47P-201ENST00000410876 114 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 AC022018.1-201ENST00000430685 241 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 RN7SL863P-201ENST00000462370 296 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 SEPT14P17-201ENST00000617978 177 ntBASIC3.15□□□□□ -1.91
FOXR1Q6PIV2 AC096644.4-201ENST00000563417 2912 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-2-201ENST00000362842 82 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 SNORA80A-201ENST00000363922 136 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-20-201ENST00000365099 82 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 SNORA32-201ENST00000384072 121 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 Y_RNA.430-201ENST00000384081 110 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 MICF-203ENST00000432679 129 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 RPS12P2-201ENST00000439728 269 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 RNU7-94P-201ENST00000459576 63 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 AC018868.1-201ENST00000491307 315 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 AC108729.3-201ENST00000513484 108 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 RNU6-667P-201ENST00000517186 102 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 AC245060.5-201ENST00000610778 3293 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 AL161431.1-201ENST00000618966 4205 ntBASIC3.14□□□□□ -1.91
FOXR1Q6PIV2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 RNU6-1229P-201ENST00000364295 107 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 RNU6-1163P-201ENST00000364516 107 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 RNA5SP109-201ENST00000391010 116 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 RNU6-1307P-201ENST00000391012 103 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 RN7SKP111-201ENST00000410349 271 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 RNU6-1190P-201ENST00000410811 104 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 ATP5J2P3-201ENST00000451550 258 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXR1Q6PIV2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 SNORA1.1-201ENST00000364671 133 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 RNU6-524P-201ENST00000384270 107 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 RNA5SP482-201ENST00000391269 118 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 SNORD88.1-201ENST00000408684 91 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 RN7SKP192-201ENST00000411291 327 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 SRIP3-201ENST00000413200 219 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 RN7SL20P-201ENST00000488827 297 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 CKS1BP2-201ENST00000497342 240 ntBASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.12□□□□□ -1.91
FOXR1Q6PIV2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 MIRLET7C-201ENST00000362160 84 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-34-201ENST00000362441 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-12-201ENST00000362583 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORA22.1-201ENST00000362701 134 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-29-201ENST00000362834 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-9-201ENST00000362912 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-21-201ENST00000362963 81 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-14-201ENST00000363090 81 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-41-201ENST00000363608 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-11-201ENST00000363616 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-5-201ENST00000363633 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-39-201ENST00000363694 82 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms