Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 RNU6-633P-201ENST00000362612 103 ntBASIC3.33□□□□□ -1.88
PTCRAQ6ISU1 RNU6-652P-201ENST00000365488 107 ntBASIC3.33□□□□□ -1.88
PTCRAQ6ISU1 RN7SKP192-201ENST00000411291 327 ntBASIC3.33□□□□□ -1.88
PTCRAQ6ISU1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.33□□□□□ -1.88
PTCRAQ6ISU1 AL159169.1-201ENST00000421119 127 ntBASIC3.33□□□□□ -1.88
PTCRAQ6ISU1 MIR1270-201ENST00000459320 83 ntBASIC3.33□□□□□ -1.88
PTCRAQ6ISU1 AC139453.2-201ENST00000487255 133 ntBASIC3.33□□□□□ -1.88
PTCRAQ6ISU1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.33□□□□□ -1.88
PTCRAQ6ISU1 MIR2682-201ENST00000580305 110 ntBASIC3.33□□□□□ -1.88
PTCRAQ6ISU1 SNORD3E-202ENST00000627253 216 ntBASIC3.33□□□□□ -1.88
PTCRAQ6ISU1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTCRAQ6ISU1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 AC009487.2-201ENST00000420969 6821 ntBASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 RNU6-950P-201ENST00000384651 107 ntBASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 MIR591-201ENST00000385290 95 ntBASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 AL034345.1-201ENST00000407768 123 ntBASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 AC090844.1-201ENST00000422019 156 ntBASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 AC006989.1-201ENST00000427212 131 ntBASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 AL139132.1-201ENST00000431587 344 ntBASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 RPS29P29-201ENST00000456396 171 ntBASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 RNU7-67P-201ENST00000459003 62 ntBASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 AC103810.6-201ENST00000606708 136 ntBASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTCRAQ6ISU1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 RNU1-70P-201ENST00000362618 164 ntBASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 RNU6-23P-201ENST00000363283 107 ntBASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 SNORA24-201ENST00000384096 131 ntBASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 SNORA26.6-201ENST00000391256 115 ntBASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 RN7SKP220-201ENST00000410611 288 ntBASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 AC105272.1-201ENST00000438604 198 ntBASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 RN7SKP132-201ENST00000516001 208 ntBASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 RNU6-958P-201ENST00000516995 106 ntBASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 RNU6-1006P-201ENST00000516998 103 ntBASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 U4atac.1-201ENST00000618345 95 ntBASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 MIR6717-201ENST00000622747 73 ntBASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTCRAQ6ISU1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 AC062016.1-201ENST00000355719 319 ntBASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 SNORD38.1-201ENST00000363863 68 ntBASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 RNU6-1019P-201ENST00000364424 107 ntBASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 AC108938.1-201ENST00000451204 136 ntBASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 RNU7-34P-201ENST00000459394 64 ntBASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 SNORA70.19-201ENST00000516717 90 ntBASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 AC005786.1-201ENST00000588553 154 ntBASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 AC103810.7-201ENST00000607821 91 ntBASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 MIR376B-201ENST00000614515 100 ntBASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 MIR622-201ENST00000638396 96 ntBASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTCRAQ6ISU1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 MIR423-201ENST00000362201 94 ntBASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 Y_RNA.140-201ENST00000363474 103 ntBASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 MIR452-201ENST00000385020 85 ntBASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 RNU6-788P-201ENST00000390967 104 ntBASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 RNA5SP293-201ENST00000410527 113 ntBASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 AL445685.2-201ENST00000422551 342 ntBASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 RNU7-73P-201ENST00000458743 63 ntBASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 RPS29P12-201ENST00000460178 152 ntBASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 AC007336.1-201ENST00000576365 3828 ntBASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 RNU6-86P-201ENST00000606534 107 ntBASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 uc_338.1-201ENST00000612113 180 ntBASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 AL449363.1-201ENST00000617815 186 ntBASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTCRAQ6ISU1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTCRAQ6ISU1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTCRAQ6ISU1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.28□□□□□ -1.88
PTCRAQ6ISU1 RNU7-2P-201ENST00000516096 62 ntBASIC3.28□□□□□ -1.88
PTCRAQ6ISU1 SNORA31.10-201ENST00000516482 106 ntBASIC3.28□□□□□ -1.88
PTCRAQ6ISU1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.28□□□□□ -1.88
PTCRAQ6ISU1 AC069114.2-201ENST00000604699 304 ntBASIC3.28□□□□□ -1.88
PTCRAQ6ISU1 MIR7843-201ENST00000622274 79 ntBASIC3.28□□□□□ -1.88
PTCRAQ6ISU1 AC244205.2-202ENST00000635781 342 ntBASIC3.28□□□□□ -1.88
PTCRAQ6ISU1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTCRAQ6ISU1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTCRAQ6ISU1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTCRAQ6ISU1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
PTCRAQ6ISU1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
PTCRAQ6ISU1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PTCRAQ6ISU1 Y_RNA.191-201ENST00000363972 113 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms