Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.91□□□□□ -1.94
RNF43Q68DV7 SNORA31.26-201ENST00000517250 137 ntBASIC2.91□□□□□ -1.94
RNF43Q68DV7 MIR4778-201ENST00000577635 80 ntBASIC2.91□□□□□ -1.94
RNF43Q68DV7 MIR4694-201ENST00000578534 80 ntBASIC2.91□□□□□ -1.94
RNF43Q68DV7 MIR4769-201ENST00000584126 77 ntBASIC2.91□□□□□ -1.94
RNF43Q68DV7 Y_RNA.773-201ENST00000607168 90 ntBASIC2.91□□□□□ -1.94
RNF43Q68DV7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RNF43Q68DV7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.9□□□□□ -1.94
RNF43Q68DV7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RNF43Q68DV7 MIR342-201ENST00000362212 99 ntBASIC2.9□□□□□ -1.95
RNF43Q68DV7 Y_RNA.360-201ENST00000365512 102 ntBASIC2.9□□□□□ -1.95
RNF43Q68DV7 AL451046.2-201ENST00000403074 277 ntBASIC2.9□□□□□ -1.95
RNF43Q68DV7 AC096949.1-201ENST00000412047 152 ntBASIC2.9□□□□□ -1.95
RNF43Q68DV7 RNU6-521P-201ENST00000516663 105 ntBASIC2.9□□□□□ -1.95
RNF43Q68DV7 SCARNA11.3-201ENST00000517276 130 ntBASIC2.9□□□□□ -1.95
RNF43Q68DV7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.9□□□□□ -1.95
RNF43Q68DV7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF43Q68DV7 MIR203B-201ENST00000636080 86 ntBASIC2.9□□□□□ -1.95
RNF43Q68DV7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RNF43Q68DV7 RNU6-363P-201ENST00000362895 105 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 snoU2-30.1-201ENST00000365012 70 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 CD24P4-201ENST00000382840 243 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 Y_RNA.454-201ENST00000384224 113 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 RNU6-675P-201ENST00000384236 104 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 MIR605-201ENST00000385078 83 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 RNU6-402P-201ENST00000410678 103 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 RNU6-733P-201ENST00000410759 104 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 BTF3P4-201ENST00000418852 495 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 SNX2P2-201ENST00000424553 323 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 AL512326.2-201ENST00000426359 151 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 AL513328.1-201ENST00000446460 224 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 snoU13.26-201ENST00000459452 105 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.89□□□□□ -1.95
RNF43Q68DV7 SNORD45.4-201ENST00000516629 73 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 MIR3670-2-201ENST00000582974 65 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 MIR3670-1-201ENST00000584160 65 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 MIR3670-3-201ENST00000584855 65 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 MIR4762-201ENST00000585261 75 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 MIR3670-4-201ENST00000612260 65 ntBASIC2.89□□□□□ -1.95
RNF43Q68DV7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RNF43Q68DV7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RNF43Q68DV7 RNU6-661P-201ENST00000362409 107 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 Y_RNA.190-201ENST00000363964 101 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 RNU6-409P-201ENST00000384114 104 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 SNORA8-201ENST00000384574 139 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 MIR592-201ENST00000384959 97 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 RNA5SP323-201ENST00000391094 133 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 RN7SKP200-201ENST00000410564 320 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 RNU2-48P-201ENST00000410694 191 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 RNA5SP21-201ENST00000410917 96 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 RNU1-41P-201ENST00000516161 162 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 SNORA9.3-201ENST00000516383 129 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 RNU1-48P-201ENST00000516400 162 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 SCARNA3-201ENST00000517097 143 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 MIR3199-1-201ENST00000582434 88 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 AC078899.2-201ENST00000595282 212 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 MIR5739-201ENST00000619803 80 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 AC095038.3-201ENST00000634439 195 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 AC110079.1-202ENST00000635213 138 ntBASIC2.88□□□□□ -1.95
RNF43Q68DV7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
RNF43Q68DV7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
RNF43Q68DV7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RNF43Q68DV7 SNORD115-19-201ENST00000363098 82 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 SNORD115-18-201ENST00000363293 82 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 U8.5-201ENST00000364528 136 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 SNORD115-17-201ENST00000364612 82 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 Y_RNA.313-201ENST00000365095 103 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 RNU6-979P-201ENST00000383896 107 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 MIR512-1-201ENST00000384913 84 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 RNU6-279P-201ENST00000391297 101 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 AL138827.1-201ENST00000402666 306 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 FO393413.1-201ENST00000402892 195 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 RNA5SP144-201ENST00000410846 116 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 MICF-203ENST00000432679 129 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 AC087499.4-201ENST00000448505 178 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 RPS23P4-201ENST00000487908 423 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 RNU6-267P-201ENST00000516714 103 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 AC004812.1-201ENST00000540773 146 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 MIR5588-201ENST00000581890 63 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 MIR4777-201ENST00000583710 86 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 AC064859.1-201ENST00000624741 174 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 AC091304.10-201ENST00000641554 121 ntBASIC2.87□□□□□ -1.95
RNF43Q68DV7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RNF43Q68DV7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RNF43Q68DV7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
RNF43Q68DV7 RNU4-67P-201ENST00000364569 141 ntBASIC2.86□□□□□ -1.95
RNF43Q68DV7 RNU6-60P-201ENST00000364792 103 ntBASIC2.86□□□□□ -1.95
RNF43Q68DV7 CKS1BP2-201ENST00000497342 240 ntBASIC2.86□□□□□ -1.95
RNF43Q68DV7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.86□□□□□ -1.95
RNF43Q68DV7 MIR7515-201ENST00000637837 67 ntBASIC2.86□□□□□ -1.95
RNF43Q68DV7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
RNF43Q68DV7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RNF43Q68DV7 RNU6-859P-201ENST00000362728 107 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 U8.2-201ENST00000363156 134 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 SNORA25.6-201ENST00000364121 118 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 RNU1-112P-201ENST00000364401 164 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 Y_RNA.336-201ENST00000365307 109 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 SNORD116-22-201ENST00000384430 92 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 SNORA80E-201ENST00000384744 137 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 MIR95-201ENST00000385072 81 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms