Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 MIR3664-201ENST00000579074 99 ntBASIC1.5□□□□□ -2.17
RUNDC3AQ59EK9 MIR4255-201ENST00000579351 72 ntBASIC1.5□□□□□ -2.17
RUNDC3AQ59EK9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.5□□□□□ -2.17
RUNDC3AQ59EK9 Y_RNA.83-201ENST00000363005 113 ntBASIC1.49□□□□□ -2.17
RUNDC3AQ59EK9 Y_RNA.274-201ENST00000364714 101 ntBASIC1.49□□□□□ -2.17
RUNDC3AQ59EK9 SNORD38C-201ENST00000384381 69 ntBASIC1.49□□□□□ -2.17
RUNDC3AQ59EK9 RNU6-1228P-201ENST00000391014 107 ntBASIC1.49□□□□□ -2.17
RUNDC3AQ59EK9 Y_RNA.622-201ENST00000411091 108 ntBASIC1.49□□□□□ -2.17
RUNDC3AQ59EK9 RNU6-561P-201ENST00000516222 102 ntBASIC1.49□□□□□ -2.17
RUNDC3AQ59EK9 SNORA25.15-201ENST00000516487 89 ntBASIC1.49□□□□□ -2.17
RUNDC3AQ59EK9 RNU6-548P-201ENST00000517083 115 ntBASIC1.49□□□□□ -2.17
RUNDC3AQ59EK9 RNU6-165P-201ENST00000517170 99 ntBASIC1.49□□□□□ -2.17
RUNDC3AQ59EK9 MIR4662B-201ENST00000579498 81 ntBASIC1.49□□□□□ -2.17
RUNDC3AQ59EK9 RNU2-4P-201ENST00000606190 192 ntBASIC1.49□□□□□ -2.17
RUNDC3AQ59EK9 GHRLOS.1-201ENST00000610995 70 ntBASIC1.49□□□□□ -2.17
RUNDC3AQ59EK9 AL121890.5-201ENST00000620848 304 ntBASIC1.49□□□□□ -2.17
RUNDC3AQ59EK9 RNU6-103P-201ENST00000363686 107 ntBASIC1.48□□□□□ -2.17
RUNDC3AQ59EK9 Y_RNA.552-201ENST00000384665 112 ntBASIC1.48□□□□□ -2.17
RUNDC3AQ59EK9 SNRPGP8-201ENST00000454064 226 ntBASIC1.48□□□□□ -2.17
RUNDC3AQ59EK9 RPL30P7-201ENST00000479312 323 ntBASIC1.48□□□□□ -2.17
RUNDC3AQ59EK9 Y_RNA.666-201ENST00000516187 112 ntBASIC1.48□□□□□ -2.17
RUNDC3AQ59EK9 AC015726.2-201ENST00000620112 122 ntBASIC1.48□□□□□ -2.17
RUNDC3AQ59EK9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RUNDC3AQ59EK9 Y_RNA.7-201ENST00000362352 102 ntBASIC1.47□□□□□ -2.17
RUNDC3AQ59EK9 SNORD45.3-201ENST00000363836 72 ntBASIC1.47□□□□□ -2.17
RUNDC3AQ59EK9 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
RUNDC3AQ59EK9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
RUNDC3AQ59EK9 RNU6-918P-201ENST00000391219 106 ntBASIC1.47□□□□□ -2.17
RUNDC3AQ59EK9 RNU2-55P-201ENST00000411146 174 ntBASIC1.47□□□□□ -2.17
RUNDC3AQ59EK9 RNU6-830P-201ENST00000516353 107 ntBASIC1.47□□□□□ -2.17
RUNDC3AQ59EK9 RNU7-25P-201ENST00000516544 62 ntBASIC1.47□□□□□ -2.17
RUNDC3AQ59EK9 SNORA18.7-201ENST00000516910 131 ntBASIC1.47□□□□□ -2.17
RUNDC3AQ59EK9 SNORA74.3-201ENST00000517108 154 ntBASIC1.47□□□□□ -2.17
RUNDC3AQ59EK9 MIR502-201ENST00000606349 86 ntBASIC1.47□□□□□ -2.17
RUNDC3AQ59EK9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.47□□□□□ -2.17
RUNDC3AQ59EK9 Y_RNA.91-201ENST00000363042 107 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 RNA5SP99-201ENST00000364020 114 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.238-201ENST00000364441 102 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-47P-201ENST00000383866 107 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.432-201ENST00000384087 111 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.515-201ENST00000384535 112 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.571-201ENST00000384753 98 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 MIR15B-201ENST00000385045 98 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 MIR548O-201ENST00000408583 114 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 SNORD123-201ENST00000459473 70 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-1299P-201ENST00000516316 100 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 CYP3A52P-201ENST00000563326 91 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 MIR4744-201ENST00000581563 82 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 AP001485.1-201ENST00000604799 199 ntBASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
RUNDC3AQ59EK9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.121-201ENST00000363309 113 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.634-201ENST00000364811 113 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 MIR548A2-201ENST00000384956 97 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 SNORA26.9-201ENST00000391322 122 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 AL627390.1-201ENST00000396055 340 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 AC108210.2-201ENST00000503681 201 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 RNU4-57P-201ENST00000515980 135 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 SNORD111.1-201ENST00000516421 86 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 AC007751.1-201ENST00000529260 376 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 AC109810.1-201ENST00000534066 224 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 AC015712.3-201ENST00000559380 164 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 AC097639.2-201ENST00000603159 172 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 Z83818.1-201ENST00000603584 150 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 AC108706.1-201ENST00000611053 297 ntBASIC1.45□□□□□ -2.18
RUNDC3AQ59EK9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.66-201ENST00000362862 102 ntBASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.297-201ENST00000364950 91 ntBASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.547-201ENST00000384654 119 ntBASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-578P-201ENST00000390980 103 ntBASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 MIR1304-201ENST00000408243 91 ntBASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 SNRPGP13-201ENST00000442212 177 ntBASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-138P-201ENST00000515952 107 ntBASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 RNA5SP153-201ENST00000516498 76 ntBASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-126P-201ENST00000516685 103 ntBASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 MIR3124-201ENST00000582636 67 ntBASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 AL357312.1-201ENST00000603879 298 ntBASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 AL096861.1-201ENST00000610899 123 ntBASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 AP000648.3-201ENST00000623539 4507 ntBASIC1.44□□□□□ -2.18
RUNDC3AQ59EK9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-1020P-201ENST00000363684 107 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.257-201ENST00000364596 102 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-200P-201ENST00000364743 107 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-728P-201ENST00000365375 104 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 SNORD24-201ENST00000383884 75 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.435-201ENST00000384095 112 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 SNORD61-201ENST00000384252 73 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 RNU4-70P-201ENST00000384579 139 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 MIR518F-201ENST00000384973 87 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 SNORD28B-201ENST00000390993 75 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 RNU2-70P-201ENST00000410718 179 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 RN7SKP88-201ENST00000516847 250 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-365P-201ENST00000517113 106 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 AL160236.1-201ENST00000556317 195 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms