Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AL445646.1-201ENST00000431784 216 ntBASIC2.15□□□□□ -2.07
IRF9Q00978 AC015922.2-201ENST00000435593 184 ntBASIC2.15□□□□□ -2.07
IRF9Q00978 AC093850.1-201ENST00000454121 251 ntBASIC2.15□□□□□ -2.07
IRF9Q00978 AC011603.4-201ENST00000611325 277 ntBASIC2.15□□□□□ -2.07
IRF9Q00978 SNORD3E-202ENST00000627253 216 ntBASIC2.15□□□□□ -2.07
IRF9Q00978 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
IRF9Q00978 Y_RNA.37-201ENST00000362606 108 ntBASIC2.14□□□□□ -2.07
IRF9Q00978 MIR539-201ENST00000365690 78 ntBASIC2.14□□□□□ -2.07
IRF9Q00978 Y_RNA.410-201ENST00000383992 113 ntBASIC2.14□□□□□ -2.07
IRF9Q00978 RNU6-1117P-201ENST00000384525 104 ntBASIC2.14□□□□□ -2.07
IRF9Q00978 Y_RNA.686-201ENST00000516548 134 ntBASIC2.14□□□□□ -2.07
IRF9Q00978 RNA5SP82-201ENST00000516707 92 ntBASIC2.14□□□□□ -2.07
IRF9Q00978 RNU6-971P-201ENST00000516920 106 ntBASIC2.14□□□□□ -2.07
IRF9Q00978 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.14□□□□□ -2.07
IRF9Q00978 MIR4778-201ENST00000577635 80 ntBASIC2.14□□□□□ -2.07
IRF9Q00978 SNORD53-201ENST00000579969 78 ntBASIC2.14□□□□□ -2.07
IRF9Q00978 MIR5197-201ENST00000583721 112 ntBASIC2.14□□□□□ -2.07
IRF9Q00978 AL590808.1-201ENST00000618696 141 ntBASIC2.14□□□□□ -2.07
IRF9Q00978 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
IRF9Q00978 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 Y_RNA.291-201ENST00000364886 113 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 SNORD18B-201ENST00000365659 72 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 MIR144-201ENST00000384886 86 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 RNA5SP338-201ENST00000410495 85 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 RNU6-717P-201ENST00000459076 104 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 RNU6-1211P-201ENST00000459179 105 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 RNU6-830P-201ENST00000516353 107 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 RNU2-60P-201ENST00000517290 128 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 MIR4287-201ENST00000579398 78 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 MIR3945-201ENST00000581853 98 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 AL773524.1-201ENST00000614065 229 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 AC064859.1-201ENST00000624741 174 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 MIR203B-201ENST00000636080 86 ntBASIC2.13□□□□□ -2.07
IRF9Q00978 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
IRF9Q00978 RNU6-1189P-201ENST00000383958 107 ntBASIC2.12□□□□□ -2.07
IRF9Q00978 AC244636.1-201ENST00000421152 228 ntBASIC2.12□□□□□ -2.07
IRF9Q00978 RNU4-57P-201ENST00000515980 135 ntBASIC2.12□□□□□ -2.07
IRF9Q00978 MIR376A2-201ENST00000636782 80 ntBASIC2.12□□□□□ -2.07
IRF9Q00978 MTND5P32-201ENST00000560711 1802 ntBASIC2.12□□□□□ -2.07
IRF9Q00978 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.11□□□□□ -2.07
IRF9Q00978 RNU6-1123P-201ENST00000362347 106 ntBASIC2.11□□□□□ -2.07
IRF9Q00978 SNORA6-201ENST00000384033 151 ntBASIC2.11□□□□□ -2.07
IRF9Q00978 RNU6-203P-201ENST00000384038 104 ntBASIC2.11□□□□□ -2.07
IRF9Q00978 AL603914.1-201ENST00000401964 204 ntBASIC2.11□□□□□ -2.07
IRF9Q00978 RNU4-53P-201ENST00000410828 140 ntBASIC2.11□□□□□ -2.07
IRF9Q00978 AC087499.4-201ENST00000448505 178 ntBASIC2.11□□□□□ -2.07
IRF9Q00978 AL021397.1-201ENST00000451806 248 ntBASIC2.11□□□□□ -2.07
IRF9Q00978 RNA5SP200-201ENST00000516360 103 ntBASIC2.11□□□□□ -2.07
IRF9Q00978 SNORD36C-201ENST00000516733 66 ntBASIC2.11□□□□□ -2.07
IRF9Q00978 RNU6-1149P-201ENST00000516810 97 ntBASIC2.11□□□□□ -2.07
IRF9Q00978 AC022254.1-201ENST00000567857 235 ntBASIC2.11□□□□□ -2.07
IRF9Q00978 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
IRF9Q00978 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
IRF9Q00978 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.1□□□□□ -2.07
IRF9Q00978 MIR516B2-201ENST00000385190 85 ntBASIC2.1□□□□□ -2.07
IRF9Q00978 RNU6-938P-201ENST00000411285 103 ntBASIC2.1□□□□□ -2.07
IRF9Q00978 MTATP6P21-201ENST00000440681 189 ntBASIC2.1□□□□□ -2.07
IRF9Q00978 Y_RNA.690-201ENST00000516603 95 ntBASIC2.1□□□□□ -2.07
IRF9Q00978 Y_RNA.692-201ENST00000516627 105 ntBASIC2.1□□□□□ -2.07
IRF9Q00978 AP003484.1-201ENST00000530974 250 ntBASIC2.1□□□□□ -2.07
IRF9Q00978 Y_RNA.757-201ENST00000578934 114 ntBASIC2.1□□□□□ -2.07
IRF9Q00978 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
IRF9Q00978 RNU6-414P-201ENST00000363705 104 ntBASIC2.09□□□□□ -2.07
IRF9Q00978 Y_RNA.218-201ENST00000364218 104 ntBASIC2.09□□□□□ -2.07
IRF9Q00978 RNU6-439P-201ENST00000384188 106 ntBASIC2.09□□□□□ -2.07
IRF9Q00978 RNU6-22P-201ENST00000384355 107 ntBASIC2.09□□□□□ -2.07
IRF9Q00978 MIR194-1-201ENST00000384892 85 ntBASIC2.09□□□□□ -2.07
IRF9Q00978 MIR136-201ENST00000385207 82 ntBASIC2.09□□□□□ -2.07
IRF9Q00978 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
IRF9Q00978 RN7SKP192-201ENST00000411291 327 ntBASIC2.09□□□□□ -2.07
IRF9Q00978 AC090255.1-201ENST00000495779 349 ntBASIC2.09□□□□□ -2.07
IRF9Q00978 RNA5SP236-201ENST00000516169 116 ntBASIC2.09□□□□□ -2.07
IRF9Q00978 RNU6-62P-201ENST00000516526 102 ntBASIC2.09□□□□□ -2.07
IRF9Q00978 SCARNA15-202ENST00000516881 127 ntBASIC2.09□□□□□ -2.07
IRF9Q00978 MIR6895-201ENST00000613497 78 ntBASIC2.09□□□□□ -2.07
IRF9Q00978 MIR6132-201ENST00000622083 109 ntBASIC2.09□□□□□ -2.07
IRF9Q00978 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
IRF9Q00978 RNU6-661P-201ENST00000362409 107 ntBASIC2.08□□□□□ -2.08
IRF9Q00978 U8.2-201ENST00000363156 134 ntBASIC2.08□□□□□ -2.08
IRF9Q00978 SNORA70B-201ENST00000384210 135 ntBASIC2.08□□□□□ -2.08
IRF9Q00978 MIR526A1-201ENST00000384897 85 ntBASIC2.08□□□□□ -2.08
IRF9Q00978 MIR17-201ENST00000385012 84 ntBASIC2.08□□□□□ -2.08
IRF9Q00978 SNORA48.3-201ENST00000391081 134 ntBASIC2.08□□□□□ -2.08
IRF9Q00978 SNORA3.2-201ENST00000408221 125 ntBASIC2.08□□□□□ -2.08
IRF9Q00978 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.08□□□□□ -2.08
IRF9Q00978 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.08□□□□□ -2.08
IRF9Q00978 RPL23AP6-201ENST00000446637 472 ntBASIC2.08□□□□□ -2.08
IRF9Q00978 MIR4299-201ENST00000577899 72 ntBASIC2.08□□□□□ -2.08
IRF9Q00978 MIR4713-201ENST00000582691 75 ntBASIC2.08□□□□□ -2.08
IRF9Q00978 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
IRF9Q00978 ZNF658B-202ENST00000615961 3375 ntBASIC2.07□□□□□ -2.08
IRF9Q00978 Y_RNA.294-201ENST00000364916 102 ntBASIC2.07□□□□□ -2.08
IRF9Q00978 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
IRF9Q00978 SNORA2.2-201ENST00000365473 135 ntBASIC2.07□□□□□ -2.08
IRF9Q00978 Y_RNA.440-201ENST00000384120 114 ntBASIC2.07□□□□□ -2.08
IRF9Q00978 AC004965.1-201ENST00000413033 213 ntBASIC2.07□□□□□ -2.08
IRF9Q00978 Z98742.3-201ENST00000418637 326 ntBASIC2.07□□□□□ -2.08
IRF9Q00978 AL356320.1-201ENST00000429616 163 ntBASIC2.07□□□□□ -2.08
IRF9Q00978 JTBP1-201ENST00000441314 247 ntBASIC2.07□□□□□ -2.08
IRF9Q00978 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms