Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SNORD3E-202ENST00000627253 216 ntBASIC2.26□□□□□ -2.05
GABREP78334 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
GABREP78334 AC080100.1-201ENST00000624239 5356 ntBASIC2.26□□□□□ -2.05
GABREP78334 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
GABREP78334 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
GABREP78334 DEFA7P-201ENST00000382676 285 ntBASIC2.25□□□□□ -2.05
GABREP78334 MIR548A2-201ENST00000384956 97 ntBASIC2.25□□□□□ -2.05
GABREP78334 AC092991.1-201ENST00000477176 376 ntBASIC2.25□□□□□ -2.05
GABREP78334 Y_RNA.676-201ENST00000516393 96 ntBASIC2.25□□□□□ -2.05
GABREP78334 MIR4778-201ENST00000577635 80 ntBASIC2.25□□□□□ -2.05
GABREP78334 Y_RNA.542-201ENST00000384641 111 ntBASIC2.24□□□□□ -2.05
GABREP78334 MIR518F-201ENST00000384973 87 ntBASIC2.24□□□□□ -2.05
GABREP78334 MIR660-201ENST00000385235 97 ntBASIC2.24□□□□□ -2.05
GABREP78334 RNU6-460P-201ENST00000391158 108 ntBASIC2.24□□□□□ -2.05
GABREP78334 RNA5SP127-201ENST00000411051 133 ntBASIC2.24□□□□□ -2.05
GABREP78334 AC244636.1-201ENST00000421152 228 ntBASIC2.24□□□□□ -2.05
GABREP78334 RPL23AP6-201ENST00000446637 472 ntBASIC2.24□□□□□ -2.05
GABREP78334 AL353997.5-201ENST00000618886 171 ntBASIC2.24□□□□□ -2.05
GABREP78334 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.24□□□□□ -2.05
GABREP78334 AC010332.2-201ENST00000613083 1904 ntBASIC2.23□□□□□ -2.05
GABREP78334 RNU6-414P-201ENST00000363705 104 ntBASIC2.23□□□□□ -2.05
GABREP78334 RNY1P11-201ENST00000363759 113 ntBASIC2.23□□□□□ -2.05
GABREP78334 Y_RNA.420-201ENST00000384043 110 ntBASIC2.23□□□□□ -2.05
GABREP78334 Y_RNA.547-201ENST00000384654 119 ntBASIC2.23□□□□□ -2.05
GABREP78334 Y_RNA.584-201ENST00000391090 114 ntBASIC2.23□□□□□ -2.05
GABREP78334 AC015922.2-201ENST00000435593 184 ntBASIC2.23□□□□□ -2.05
GABREP78334 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.23□□□□□ -2.05
GABREP78334 RNU7-197P-201ENST00000458836 62 ntBASIC2.23□□□□□ -2.05
GABREP78334 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.23□□□□□ -2.05
GABREP78334 AC016717.2-201ENST00000609089 5141 ntBASIC2.23□□□□□ -2.05
GABREP78334 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
GABREP78334 MIR6073-201ENST00000352083 89 ntBASIC2.22□□□□□ -2.05
GABREP78334 MIR424-201ENST00000362227 98 ntBASIC2.22□□□□□ -2.05
GABREP78334 SNORD115-28-201ENST00000363931 81 ntBASIC2.22□□□□□ -2.05
GABREP78334 MIR676-201ENST00000390702 67 ntBASIC2.22□□□□□ -2.05
GABREP78334 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
GABREP78334 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
GABREP78334 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.22□□□□□ -2.05
GABREP78334 RNA5SP458-201ENST00000516188 119 ntBASIC2.22□□□□□ -2.05
GABREP78334 RNU6-406P-201ENST00000516470 107 ntBASIC2.22□□□□□ -2.05
GABREP78334 AL096840.1-201ENST00000603287 93 ntBASIC2.22□□□□□ -2.05
GABREP78334 AC132825.6-201ENST00000638861 357 ntBASIC2.22□□□□□ -2.05
GABREP78334 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
GABREP78334 RNU6-203P-201ENST00000384038 104 ntBASIC2.21□□□□□ -2.06
GABREP78334 RNU6-439P-201ENST00000384188 106 ntBASIC2.21□□□□□ -2.06
GABREP78334 MIR452-201ENST00000385020 85 ntBASIC2.21□□□□□ -2.06
GABREP78334 MIR624-201ENST00000385217 97 ntBASIC2.21□□□□□ -2.06
GABREP78334 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
GABREP78334 RNU6-257P-201ENST00000410238 98 ntBASIC2.21□□□□□ -2.06
GABREP78334 AL445646.1-201ENST00000431784 216 ntBASIC2.21□□□□□ -2.06
GABREP78334 AF228730.3-201ENST00000436691 102 ntBASIC2.21□□□□□ -2.06
GABREP78334 RPL23AP42-201ENST00000471152 471 ntBASIC2.21□□□□□ -2.06
GABREP78334 AC131055.1-201ENST00000584626 316 ntBASIC2.21□□□□□ -2.06
GABREP78334 AC134878.1-201ENST00000619901 243 ntBASIC2.21□□□□□ -2.06
GABREP78334 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
GABREP78334 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
GABREP78334 Y_RNA.251-201ENST00000364551 99 ntBASIC2.2□□□□□ -2.06
GABREP78334 RNU6-1292P-201ENST00000383856 107 ntBASIC2.2□□□□□ -2.06
GABREP78334 MIR516B2-201ENST00000385190 85 ntBASIC2.2□□□□□ -2.06
GABREP78334 SNORA40-201ENST00000388090 126 ntBASIC2.2□□□□□ -2.06
GABREP78334 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
GABREP78334 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
GABREP78334 SNORD77.3-201ENST00000391113 65 ntBASIC2.2□□□□□ -2.06
GABREP78334 RNA5SP181-201ENST00000410246 98 ntBASIC2.2□□□□□ -2.06
GABREP78334 HMGN2P19-201ENST00000425149 265 ntBASIC2.2□□□□□ -2.06
GABREP78334 MIR4299-201ENST00000577899 72 ntBASIC2.2□□□□□ -2.06
GABREP78334 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.2□□□□□ -2.06
GABREP78334 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
GABREP78334 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.2□□□□□ -2.06
GABREP78334 RNU6-1123P-201ENST00000362347 106 ntBASIC2.19□□□□□ -2.06
GABREP78334 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.19□□□□□ -2.06
GABREP78334 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.19□□□□□ -2.06
GABREP78334 AP001328.1-201ENST00000528550 176 ntBASIC2.19□□□□□ -2.06
GABREP78334 Y_RNA.37-201ENST00000362606 108 ntBASIC2.18□□□□□ -2.06
GABREP78334 SNORA64-201ENST00000384674 134 ntBASIC2.18□□□□□ -2.06
GABREP78334 SNORA19-201ENST00000384737 128 ntBASIC2.18□□□□□ -2.06
GABREP78334 Y_RNA.586-201ENST00000391146 98 ntBASIC2.18□□□□□ -2.06
GABREP78334 MTND4LP9-201ENST00000427694 174 ntBASIC2.18□□□□□ -2.06
GABREP78334 HMGN2P23-201ENST00000456759 269 ntBASIC2.18□□□□□ -2.06
GABREP78334 SUMO2P16-201ENST00000519475 264 ntBASIC2.18□□□□□ -2.06
GABREP78334 MIR4713-201ENST00000582691 75 ntBASIC2.18□□□□□ -2.06
GABREP78334 MIR5007-201ENST00000583098 95 ntBASIC2.18□□□□□ -2.06
GABREP78334 AC095038.3-201ENST00000634439 195 ntBASIC2.18□□□□□ -2.06
GABREP78334 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
GABREP78334 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
GABREP78334 AL157777.2-201ENST00000258070 137 ntBASIC2.17□□□□□ -2.06
GABREP78334 RNU6-915P-201ENST00000364943 103 ntBASIC2.17□□□□□ -2.06
GABREP78334 SNORD18B-201ENST00000365659 72 ntBASIC2.17□□□□□ -2.06
GABREP78334 Y_RNA.410-201ENST00000383992 113 ntBASIC2.17□□□□□ -2.06
GABREP78334 MIR136-201ENST00000385207 82 ntBASIC2.17□□□□□ -2.06
GABREP78334 AC004965.1-201ENST00000413033 213 ntBASIC2.17□□□□□ -2.06
GABREP78334 JTBP1-201ENST00000441314 247 ntBASIC2.17□□□□□ -2.06
GABREP78334 AC022254.1-201ENST00000567857 235 ntBASIC2.17□□□□□ -2.06
GABREP78334 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.17□□□□□ -2.06
GABREP78334 AC106754.2-201ENST00000623006 233 ntBASIC2.17□□□□□ -2.06
GABREP78334 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
GABREP78334 RNU6-661P-201ENST00000362409 107 ntBASIC2.16□□□□□ -2.06
GABREP78334 Y_RNA.52-201ENST00000362760 96 ntBASIC2.16□□□□□ -2.06
GABREP78334 U8.1-201ENST00000362843 134 ntBASIC2.16□□□□□ -2.06
GABREP78334 RNU6-457P-201ENST00000363999 107 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 247.4 ms