Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.32□□□□□ -2.04
HERVK_113P62684 Y_RNA.71-201ENST00000362892 104 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 Y_RNA.218-201ENST00000364218 104 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 SNORD18B-201ENST00000365659 72 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 SNORA40.18-201ENST00000391200 128 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 RNA5SP501-201ENST00000410990 112 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 RNA5SP127-201ENST00000411051 133 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.32□□□□□ -2.04
HERVK_113P62684 HSPE1P9-201ENST00000440046 311 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 AC008267.6-201ENST00000441664 139 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 SNRPGP13-201ENST00000442212 177 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 AC079804.2-201ENST00000490376 200 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 RNU5E-3P-201ENST00000515913 68 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 RNU6-479P-201ENST00000516348 105 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 SNORA31.10-201ENST00000516482 106 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 SNORA31.25-201ENST00000517242 134 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 RNU6-1116P-201ENST00000517269 99 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 MIR4762-201ENST00000585261 75 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.32□□□□□ -2.04
HERVK_113P62684 SNORA28-201ENST00000606769 126 ntBASIC2.32□□□□□ -2.04
HERVK_113P62684 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
HERVK_113P62684 U8.5-201ENST00000364528 136 ntBASIC2.31□□□□□ -2.04
HERVK_113P62684 Y_RNA.261-201ENST00000364631 102 ntBASIC2.31□□□□□ -2.04
HERVK_113P62684 SNORA4.2-201ENST00000365313 147 ntBASIC2.31□□□□□ -2.04
HERVK_113P62684 RNU6-163P-201ENST00000384396 106 ntBASIC2.31□□□□□ -2.04
HERVK_113P62684 SNORA22C-201ENST00000384614 134 ntBASIC2.31□□□□□ -2.04
HERVK_113P62684 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.31□□□□□ -2.04
HERVK_113P62684 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HERVK_113P62684 RN7SKP200-201ENST00000410564 320 ntBASIC2.31□□□□□ -2.04
HERVK_113P62684 AL158823.1-201ENST00000418441 478 ntBASIC2.31□□□□□ -2.04
HERVK_113P62684 Y_RNA.686-201ENST00000516548 134 ntBASIC2.31□□□□□ -2.04
HERVK_113P62684 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
HERVK_113P62684 RNU6-888P-201ENST00000363010 101 ntBASIC2.3□□□□□ -2.04
HERVK_113P62684 Y_RNA.294-201ENST00000364916 102 ntBASIC2.3□□□□□ -2.04
HERVK_113P62684 RNA5SP138-201ENST00000365098 114 ntBASIC2.3□□□□□ -2.04
HERVK_113P62684 SNORD24-201ENST00000383884 75 ntBASIC2.3□□□□□ -2.04
HERVK_113P62684 MIR144-201ENST00000384886 86 ntBASIC2.3□□□□□ -2.04
HERVK_113P62684 RNU6-1168P-201ENST00000390831 104 ntBASIC2.3□□□□□ -2.04
HERVK_113P62684 SNORA48.1-201ENST00000390879 135 ntBASIC2.3□□□□□ -2.04
HERVK_113P62684 RNU6-1333P-201ENST00000516162 93 ntBASIC2.3□□□□□ -2.04
HERVK_113P62684 Y_RNA.757-201ENST00000578934 114 ntBASIC2.3□□□□□ -2.04
HERVK_113P62684 AL365205.2-201ENST00000594586 68 ntBASIC2.3□□□□□ -2.04
HERVK_113P62684 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HERVK_113P62684 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.3□□□□□ -2.04
HERVK_113P62684 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HERVK_113P62684 SNORA63D-201ENST00000364359 132 ntBASIC2.29□□□□□ -2.04
HERVK_113P62684 Y_RNA.338-201ENST00000365320 114 ntBASIC2.29□□□□□ -2.04
HERVK_113P62684 RNA5SP37-201ENST00000365420 130 ntBASIC2.29□□□□□ -2.04
HERVK_113P62684 RNU6-950P-201ENST00000384651 107 ntBASIC2.29□□□□□ -2.04
HERVK_113P62684 MIR520A-201ENST00000384862 85 ntBASIC2.29□□□□□ -2.04
HERVK_113P62684 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
HERVK_113P62684 AL034345.1-201ENST00000407768 123 ntBASIC2.29□□□□□ -2.04
HERVK_113P62684 MIR548O-201ENST00000408583 114 ntBASIC2.29□□□□□ -2.04
HERVK_113P62684 AC114811.1-201ENST00000507207 168 ntBASIC2.29□□□□□ -2.04
HERVK_113P62684 Y_RNA.692-201ENST00000516627 105 ntBASIC2.29□□□□□ -2.04
HERVK_113P62684 IGLV3-17-201ENST00000519099 244 ntBASIC2.29□□□□□ -2.04
HERVK_113P62684 MIR4529-201ENST00000578110 78 ntBASIC2.29□□□□□ -2.04
HERVK_113P62684 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HERVK_113P62684 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HERVK_113P62684 Y_RNA.52-201ENST00000362760 96 ntBASIC2.28□□□□□ -2.04
HERVK_113P62684 Y_RNA.120-201ENST00000363304 110 ntBASIC2.28□□□□□ -2.04
HERVK_113P62684 Y_RNA.127-201ENST00000363386 109 ntBASIC2.28□□□□□ -2.04
HERVK_113P62684 MIR624-201ENST00000385217 97 ntBASIC2.28□□□□□ -2.04
HERVK_113P62684 AL445685.2-201ENST00000422551 342 ntBASIC2.28□□□□□ -2.04
HERVK_113P62684 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.28□□□□□ -2.04
HERVK_113P62684 RNU7-34P-201ENST00000459394 64 ntBASIC2.28□□□□□ -2.04
HERVK_113P62684 AC025033.1-201ENST00000463883 194 ntBASIC2.28□□□□□ -2.04
HERVK_113P62684 RPL23AP63-201ENST00000498752 471 ntBASIC2.28□□□□□ -2.04
HERVK_113P62684 RNU4-57P-201ENST00000515980 135 ntBASIC2.28□□□□□ -2.04
HERVK_113P62684 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.28□□□□□ -2.04
HERVK_113P62684 MIR6895-201ENST00000613497 78 ntBASIC2.28□□□□□ -2.04
HERVK_113P62684 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.28□□□□□ -2.04
HERVK_113P62684 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HERVK_113P62684 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HERVK_113P62684 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HERVK_113P62684 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HERVK_113P62684 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HERVK_113P62684 RNU6-268P-201ENST00000364174 107 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 SNORD116-14-201ENST00000383894 92 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 SNORD116-17-201ENST00000383929 92 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 SNORD116-15-201ENST00000384445 92 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 SNORD116-19-201ENST00000384729 92 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 MIR548A2-201ENST00000384956 97 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 MIR518F-201ENST00000384973 87 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 CALM2P4-201ENST00000430810 426 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 AC055731.1-201ENST00000474387 401 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 RNU7-25P-201ENST00000516544 62 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 Y_RNA.690-201ENST00000516603 95 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 RNA5SP437-201ENST00000517249 129 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 MIR5089-201ENST00000580047 84 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 AC006441.5-201ENST00000612680 209 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 AC015726.2-201ENST00000620112 122 ntBASIC2.27□□□□□ -2.05
HERVK_113P62684 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
HERVK_113P62684 RNU6-235P-201ENST00000362644 107 ntBASIC2.26□□□□□ -2.05
HERVK_113P62684 RNU6-1290P-201ENST00000362957 109 ntBASIC2.26□□□□□ -2.05
HERVK_113P62684 Y_RNA.336-201ENST00000365307 109 ntBASIC2.26□□□□□ -2.05
HERVK_113P62684 RNU6-80P-201ENST00000384195 107 ntBASIC2.26□□□□□ -2.05
HERVK_113P62684 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms