Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 RNU1-109P-201ENST00000383960 147 ntBASIC2.2□□□□□ -2.06
LMO1P25800 RNU6-546P-201ENST00000383991 107 ntBASIC2.2□□□□□ -2.06
LMO1P25800 Y_RNA.467-201ENST00000384297 102 ntBASIC2.2□□□□□ -2.06
LMO1P25800 MIR561-201ENST00000385216 97 ntBASIC2.2□□□□□ -2.06
LMO1P25800 MIR1270-201ENST00000459320 83 ntBASIC2.2□□□□□ -2.06
LMO1P25800 Y_RNA.659-201ENST00000515994 113 ntBASIC2.2□□□□□ -2.06
LMO1P25800 RNU5F-4P-201ENST00000516581 114 ntBASIC2.2□□□□□ -2.06
LMO1P25800 RNU7-172P-201ENST00000517125 64 ntBASIC2.2□□□□□ -2.06
LMO1P25800 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.2□□□□□ -2.06
LMO1P25800 MIR4668-201ENST00000582284 70 ntBASIC2.2□□□□□ -2.06
LMO1P25800 MIR5092-201ENST00000583139 88 ntBASIC2.2□□□□□ -2.06
LMO1P25800 AL049779.4-201ENST00000604500 156 ntBASIC2.2□□□□□ -2.06
LMO1P25800 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
LMO1P25800 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
LMO1P25800 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
LMO1P25800 Y_RNA.10-201ENST00000362371 110 ntBASIC2.19□□□□□ -2.06
LMO1P25800 RNU6-60P-201ENST00000364792 103 ntBASIC2.19□□□□□ -2.06
LMO1P25800 Y_RNA.316-201ENST00000365118 111 ntBASIC2.19□□□□□ -2.06
LMO1P25800 RNU6-234P-201ENST00000365229 104 ntBASIC2.19□□□□□ -2.06
LMO1P25800 Y_RNA.360-201ENST00000365512 102 ntBASIC2.19□□□□□ -2.06
LMO1P25800 Y_RNA.531-201ENST00000384589 121 ntBASIC2.19□□□□□ -2.06
LMO1P25800 MIR300-201ENST00000401138 83 ntBASIC2.19□□□□□ -2.06
LMO1P25800 RNU6-938P-201ENST00000411285 103 ntBASIC2.19□□□□□ -2.06
LMO1P25800 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.19□□□□□ -2.06
LMO1P25800 TRBV12-1-201ENST00000479785 344 ntBASIC2.19□□□□□ -2.06
LMO1P25800 MIR449C-201ENST00000516047 92 ntBASIC2.19□□□□□ -2.06
LMO1P25800 AC011604.1-201ENST00000545978 196 ntBASIC2.19□□□□□ -2.06
LMO1P25800 MIR4662B-201ENST00000579498 81 ntBASIC2.19□□□□□ -2.06
LMO1P25800 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.19□□□□□ -2.06
LMO1P25800 AC008507.4-201ENST00000585464 127 ntBASIC2.19□□□□□ -2.06
LMO1P25800 AC021443.1-201ENST00000604478 211 ntBASIC2.19□□□□□ -2.06
LMO1P25800 AL355297.2-201ENST00000604792 129 ntBASIC2.19□□□□□ -2.06
LMO1P25800 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.19□□□□□ -2.06
LMO1P25800 MIR548BB-201ENST00000626714 66 ntBASIC2.19□□□□□ -2.06
LMO1P25800 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LMO1P25800 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.19□□□□□ -2.06
LMO1P25800 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
LMO1P25800 AC062016.1-201ENST00000355719 319 ntBASIC2.18□□□□□ -2.06
LMO1P25800 RNU4-36P-201ENST00000364294 144 ntBASIC2.18□□□□□ -2.06
LMO1P25800 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
LMO1P25800 RNU6-679P-201ENST00000391003 106 ntBASIC2.18□□□□□ -2.06
LMO1P25800 SNORA26-201ENST00000391286 122 ntBASIC2.18□□□□□ -2.06
LMO1P25800 MIR1283-1-201ENST00000408494 87 ntBASIC2.18□□□□□ -2.06
LMO1P25800 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.18□□□□□ -2.06
LMO1P25800 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.18□□□□□ -2.06
LMO1P25800 SNORA31.11-201ENST00000516528 139 ntBASIC2.18□□□□□ -2.06
LMO1P25800 AC109329.2-201ENST00000519658 482 ntBASIC2.18□□□□□ -2.06
LMO1P25800 MIR4694-201ENST00000578534 80 ntBASIC2.18□□□□□ -2.06
LMO1P25800 AC073413.2-201ENST00000604332 360 ntBASIC2.18□□□□□ -2.06
LMO1P25800 Y_RNA.788-201ENST00000622394 112 ntBASIC2.18□□□□□ -2.06
LMO1P25800 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.18□□□□□ -2.06
LMO1P25800 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.18□□□□□ -2.06
LMO1P25800 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LMO1P25800 RNU6-271P-201ENST00000363858 105 ntBASIC2.17□□□□□ -2.06
LMO1P25800 SNORD115-27-201ENST00000364430 82 ntBASIC2.17□□□□□ -2.06
LMO1P25800 RNU6-690P-201ENST00000365242 106 ntBASIC2.17□□□□□ -2.06
LMO1P25800 RNU1-138P-201ENST00000384093 164 ntBASIC2.17□□□□□ -2.06
LMO1P25800 RNU6-975P-201ENST00000384296 105 ntBASIC2.17□□□□□ -2.06
LMO1P25800 SNORD116-22-201ENST00000384430 92 ntBASIC2.17□□□□□ -2.06
LMO1P25800 RNU6-57P-201ENST00000411348 103 ntBASIC2.17□□□□□ -2.06
LMO1P25800 SNRPGP10-201ENST00000432323 225 ntBASIC2.17□□□□□ -2.06
LMO1P25800 AL109933.2-201ENST00000452651 260 ntBASIC2.17□□□□□ -2.06
LMO1P25800 RNU7-164P-201ENST00000459221 62 ntBASIC2.17□□□□□ -2.06
LMO1P25800 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.17□□□□□ -2.06
LMO1P25800 RNU6-693P-201ENST00000516134 107 ntBASIC2.17□□□□□ -2.06
LMO1P25800 MIR4712-201ENST00000583750 82 ntBASIC2.17□□□□□ -2.06
LMO1P25800 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.17□□□□□ -2.06
LMO1P25800 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.17□□□□□ -2.06
LMO1P25800 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LMO1P25800 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.17□□□□□ -2.06
LMO1P25800 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
LMO1P25800 SNORD115-19-201ENST00000363098 82 ntBASIC2.16□□□□□ -2.06
LMO1P25800 SNORD115-18-201ENST00000363293 82 ntBASIC2.16□□□□□ -2.06
LMO1P25800 RNU1-23P-201ENST00000363361 144 ntBASIC2.16□□□□□ -2.06
LMO1P25800 SNORD115-17-201ENST00000364612 82 ntBASIC2.16□□□□□ -2.06
LMO1P25800 SNORD31B-201ENST00000364977 69 ntBASIC2.16□□□□□ -2.06
LMO1P25800 RNY1P4-201ENST00000384595 115 ntBASIC2.16□□□□□ -2.06
LMO1P25800 U8.17-201ENST00000391292 132 ntBASIC2.16□□□□□ -2.06
LMO1P25800 MIR1912-201ENST00000410389 80 ntBASIC2.16□□□□□ -2.06
LMO1P25800 RNU2-48P-201ENST00000410694 191 ntBASIC2.16□□□□□ -2.06
LMO1P25800 RPS12P2-201ENST00000439728 269 ntBASIC2.16□□□□□ -2.06
LMO1P25800 UBBP3-201ENST00000445497 241 ntBASIC2.16□□□□□ -2.06
LMO1P25800 RNU7-14P-201ENST00000459331 62 ntBASIC2.16□□□□□ -2.06
LMO1P25800 RN7SKP132-201ENST00000516001 208 ntBASIC2.16□□□□□ -2.06
LMO1P25800 SNORD36C-201ENST00000516733 66 ntBASIC2.16□□□□□ -2.06
LMO1P25800 MIR3163-201ENST00000581592 73 ntBASIC2.16□□□□□ -2.06
LMO1P25800 MIR2681-201ENST00000581814 105 ntBASIC2.16□□□□□ -2.06
LMO1P25800 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.16□□□□□ -2.06
LMO1P25800 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.16□□□□□ -2.06
LMO1P25800 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
LMO1P25800 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.16□□□□□ -2.06
LMO1P25800 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LMO1P25800 RNU6-859P-201ENST00000362728 107 ntBASIC2.15□□□□□ -2.07
LMO1P25800 RNU4-13P-201ENST00000364019 141 ntBASIC2.15□□□□□ -2.07
LMO1P25800 Y_RNA.253-201ENST00000364562 112 ntBASIC2.15□□□□□ -2.07
LMO1P25800 SNORA80E-201ENST00000384744 137 ntBASIC2.15□□□□□ -2.07
LMO1P25800 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
LMO1P25800 RNA5SP210-201ENST00000391034 120 ntBASIC2.15□□□□□ -2.07
LMO1P25800 MIR1261-201ENST00000408659 82 ntBASIC2.15□□□□□ -2.07
LMO1P25800 Y_RNA.611-201ENST00000410682 108 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms