Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SNORD116-30-201ENST00000516468 85 ntBASIC-3.38□□□□□ -2.95
TOP2AP11388 RNU6-531P-201ENST00000516694 104 ntBASIC-3.38□□□□□ -2.95
TOP2AP11388 Y_RNA.802-201ENST00000614892 130 ntBASIC-3.38□□□□□ -2.95
TOP2AP11388 AC079248.2-201ENST00000623779 326 ntBASIC-3.38□□□□□ -2.95
TOP2AP11388 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-3.38□□□□□ -2.95
TOP2AP11388 RNU2-8P-201ENST00000410727 190 ntBASIC-3.39□□□□□ -2.95
TOP2AP11388 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.39□□□□□ -2.95
TOP2AP11388 RNU4-20P-201ENST00000365601 151 ntBASIC-3.39□□□□□ -2.95
TOP2AP11388 MIR190B-201ENST00000401119 79 ntBASIC-3.39□□□□□ -2.95
TOP2AP11388 Y_RNA.621-201ENST00000411065 96 ntBASIC-3.39□□□□□ -2.95
TOP2AP11388 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.39□□□□□ -2.95
TOP2AP11388 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-3.39□□□□□ -2.95
TOP2AP11388 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-3.39□□□□□ -2.95
TOP2AP11388 AP001282.2-201ENST00000616149 309 ntBASIC-3.39□□□□□ -2.95
TOP2AP11388 SNORD115-13-201ENST00000363358 82 ntBASIC-3.4□□□□□ -2.95
TOP2AP11388 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.4□□□□□ -2.95
TOP2AP11388 RNU6-278P-201ENST00000390945 109 ntBASIC-3.4□□□□□ -2.95
TOP2AP11388 MTND4P3-201ENST00000417829 541 ntBASIC-3.4□□□□□ -2.95
TOP2AP11388 RNU6-323P-201ENST00000521915 107 ntBASIC-3.4□□□□□ -2.95
TOP2AP11388 Y_RNA.778-201ENST00000620203 90 ntBASIC-3.4□□□□□ -2.95
TOP2AP11388 AC022418.1-201ENST00000624118 445 ntBASIC-3.4□□□□□ -2.95
TOP2AP11388 RNU4-58P-201ENST00000363192 141 ntBASIC-3.41□□□□□ -2.96
TOP2AP11388 MIR519E-201ENST00000385075 84 ntBASIC-3.41□□□□□ -2.96
TOP2AP11388 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.41□□□□□ -2.96
TOP2AP11388 RNA5SP237-201ENST00000410414 113 ntBASIC-3.41□□□□□ -2.96
TOP2AP11388 snoU13.6-201ENST00000458785 104 ntBASIC-3.41□□□□□ -2.96
TOP2AP11388 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-3.41□□□□□ -2.96
TOP2AP11388 MIR548AC-201ENST00000585049 88 ntBASIC-3.41□□□□□ -2.96
TOP2AP11388 AC091931.1-201ENST00000623488 728 ntBASIC-3.41□□□□□ -2.96
TOP2AP11388 SNORA43.4-201ENST00000629559 138 ntBASIC-3.41□□□□□ -2.96
TOP2AP11388 SNORD115-23-201ENST00000364461 82 ntBASIC-3.42□□□□□ -2.96
TOP2AP11388 RNU6-913P-201ENST00000390913 95 ntBASIC-3.42□□□□□ -2.96
TOP2AP11388 RNU6-336P-201ENST00000364891 107 ntBASIC-3.43□□□□□ -2.96
TOP2AP11388 RNU6-128P-201ENST00000383976 107 ntBASIC-3.43□□□□□ -2.96
TOP2AP11388 MIRLET7B-201ENST00000385140 83 ntBASIC-3.43□□□□□ -2.96
TOP2AP11388 AC018880.2-201ENST00000414265 201 ntBASIC-3.43□□□□□ -2.96
TOP2AP11388 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-3.43□□□□□ -2.96
TOP2AP11388 RPL30P10-201ENST00000488148 337 ntBASIC-3.43□□□□□ -2.96
TOP2AP11388 HIF1AP1-201ENST00000553642 175 ntBASIC-3.43□□□□□ -2.96
TOP2AP11388 MTND5P40-201ENST00000559945 246 ntBASIC-3.43□□□□□ -2.96
TOP2AP11388 DISC2.1-201ENST00000612827 205 ntBASIC-3.43□□□□□ -2.96
TOP2AP11388 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-3.44□□□□□ -2.96
TOP2AP11388 SEPT14P24-201ENST00000447236 180 ntBASIC-3.44□□□□□ -2.96
TOP2AP11388 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-3.44□□□□□ -2.96
TOP2AP11388 SEPT14P4-201ENST00000513445 186 ntBASIC-3.44□□□□□ -2.96
TOP2AP11388 RNU7-13P-201ENST00000516413 62 ntBASIC-3.44□□□□□ -2.96
TOP2AP11388 AL136370.1-201ENST00000608166 691 ntBASIC-3.44□□□□□ -2.96
TOP2AP11388 AC072039.2-201ENST00000608883 439 ntBASIC-3.44□□□□□ -2.96
TOP2AP11388 AC023158.2-201ENST00000614876 543 ntBASIC-3.44□□□□□ -2.96
TOP2AP11388 U6.114-201ENST00000636407 96 ntBASIC-3.44□□□□□ -2.96
TOP2AP11388 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.44□□□□□ -2.96
TOP2AP11388 MIR578-201ENST00000384828 96 ntBASIC-3.44□□□□□ -2.96
TOP2AP11388 RNU6-131P-201ENST00000391144 107 ntBASIC-3.44□□□□□ -2.96
TOP2AP11388 RNU2-39P-201ENST00000410604 198 ntBASIC-3.44□□□□□ -2.96
TOP2AP11388 RNU6-325P-201ENST00000411132 105 ntBASIC-3.44□□□□□ -2.96
TOP2AP11388 RNU6-397P-201ENST00000516226 104 ntBASIC-3.44□□□□□ -2.96
TOP2AP11388 RNU6-79P-201ENST00000362511 107 ntBASIC-3.45□□□□□ -2.96
TOP2AP11388 RNU6-839P-201ENST00000363347 108 ntBASIC-3.45□□□□□ -2.96
TOP2AP11388 RNU6-695P-201ENST00000391157 104 ntBASIC-3.45□□□□□ -2.96
TOP2AP11388 RNU4-88P-201ENST00000411220 86 ntBASIC-3.45□□□□□ -2.96
TOP2AP11388 RPS27AP14-201ENST00000422868 454 ntBASIC-3.45□□□□□ -2.96
TOP2AP11388 RN7SKP299-201ENST00000606679 301 ntBASIC-3.45□□□□□ -2.96
TOP2AP11388 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-3.46□□□□□ -2.96
TOP2AP11388 Y_RNA.2-201ENST00000362330 96 ntBASIC-3.46□□□□□ -2.96
TOP2AP11388 RNU6-208P-201ENST00000362431 107 ntBASIC-3.46□□□□□ -2.96
TOP2AP11388 SNORD115-16-201ENST00000363887 82 ntBASIC-3.46□□□□□ -2.96
TOP2AP11388 RNU4-10P-201ENST00000364383 140 ntBASIC-3.46□□□□□ -2.96
TOP2AP11388 Y_RNA.517-201ENST00000384551 106 ntBASIC-3.46□□□□□ -2.96
TOP2AP11388 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.46□□□□□ -2.96
TOP2AP11388 AC145350.1-201ENST00000567426 208 ntBASIC-3.46□□□□□ -2.96
TOP2AP11388 MIR548AM-201ENST00000584298 74 ntBASIC-3.46□□□□□ -2.96
TOP2AP11388 AC127459.3-201ENST00000624328 466 ntBASIC-3.46□□□□□ -2.96
TOP2AP11388 RNU6-407P-201ENST00000365280 104 ntBASIC-3.47□□□□□ -2.96
TOP2AP11388 RNU6-449P-201ENST00000383914 107 ntBASIC-3.47□□□□□ -2.96
TOP2AP11388 MIR617-201ENST00000385030 97 ntBASIC-3.47□□□□□ -2.96
TOP2AP11388 AL359881.1-201ENST00000602916 267 ntBASIC-3.47□□□□□ -2.96
TOP2AP11388 Y_RNA.162-201ENST00000363683 102 ntBASIC-3.48□□□□□ -2.97
TOP2AP11388 SNORD14E-201ENST00000364009 85 ntBASIC-3.48□□□□□ -2.97
TOP2AP11388 SNORA20B-201ENST00000384220 132 ntBASIC-3.48□□□□□ -2.97
TOP2AP11388 MIR320B2-201ENST00000408479 138 ntBASIC-3.48□□□□□ -2.97
TOP2AP11388 Y_RNA.714-201ENST00000517065 90 ntBASIC-3.48□□□□□ -2.97
TOP2AP11388 AC022441.3-201ENST00000605737 136 ntBASIC-3.48□□□□□ -2.97
TOP2AP11388 SNORD11B-201ENST00000607707 90 ntBASIC-3.48□□□□□ -2.97
TOP2AP11388 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-3.48□□□□□ -2.97
TOP2AP11388 Y_RNA.110-201ENST00000363220 99 ntBASIC-3.49□□□□□ -2.97
TOP2AP11388 RNU6-54P-201ENST00000365563 107 ntBASIC-3.49□□□□□ -2.97
TOP2AP11388 RNU6-571P-201ENST00000384128 107 ntBASIC-3.49□□□□□ -2.97
TOP2AP11388 RNU6-831P-201ENST00000384548 107 ntBASIC-3.49□□□□□ -2.97
TOP2AP11388 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-3.49□□□□□ -2.97
TOP2AP11388 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-3.49□□□□□ -2.97
TOP2AP11388 RNU6-924P-201ENST00000362926 108 ntBASIC-3.49□□□□□ -2.97
TOP2AP11388 Y_RNA.215-201ENST00000364204 112 ntBASIC-3.49□□□□□ -2.97
TOP2AP11388 SNORD87-201ENST00000364849 89 ntBASIC-3.49□□□□□ -2.97
TOP2AP11388 RNU6-841P-201ENST00000383872 107 ntBASIC-3.49□□□□□ -2.97
TOP2AP11388 AC090616.4-201ENST00000448026 115 ntBASIC-3.49□□□□□ -2.97
TOP2AP11388 RNY4P37-201ENST00000516225 96 ntBASIC-3.49□□□□□ -2.97
TOP2AP11388 AC231657.1-201ENST00000624313 397 ntBASIC-3.49□□□□□ -2.97
TOP2AP11388 Y_RNA.302-201ENST00000364997 102 ntBASIC-3.5□□□□□ -2.97
TOP2AP11388 SNORD115-10-201ENST00000365073 81 ntBASIC-3.5□□□□□ -2.97
TOP2AP11388 MIR599-201ENST00000385069 95 ntBASIC-3.5□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms