Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 RNU6-888P-201ENST00000363010 101 ntBASIC1.74□□□□□ -2.13
PF4V1P10720 Y_RNA.233-201ENST00000364407 101 ntBASIC1.74□□□□□ -2.13
PF4V1P10720 SNORD123-201ENST00000459473 70 ntBASIC1.74□□□□□ -2.13
PF4V1P10720 AC108210.2-201ENST00000503681 201 ntBASIC1.74□□□□□ -2.13
PF4V1P10720 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.74□□□□□ -2.13
PF4V1P10720 RNU6-561P-201ENST00000516222 102 ntBASIC1.74□□□□□ -2.13
PF4V1P10720 RNU7-25P-201ENST00000516544 62 ntBASIC1.74□□□□□ -2.13
PF4V1P10720 RNU7-43P-201ENST00000516554 64 ntBASIC1.74□□□□□ -2.13
PF4V1P10720 MRPS18CP4-201ENST00000535821 231 ntBASIC1.74□□□□□ -2.13
PF4V1P10720 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
PF4V1P10720 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
PF4V1P10720 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
PF4V1P10720 Y_RNA.66-201ENST00000362862 102 ntBASIC1.73□□□□□ -2.13
PF4V1P10720 Y_RNA.91-201ENST00000363042 107 ntBASIC1.73□□□□□ -2.13
PF4V1P10720 Y_RNA.412-201ENST00000384001 104 ntBASIC1.73□□□□□ -2.13
PF4V1P10720 Y_RNA.547-201ENST00000384654 119 ntBASIC1.73□□□□□ -2.13
PF4V1P10720 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PF4V1P10720 AC019129.1-201ENST00000403786 261 ntBASIC1.73□□□□□ -2.13
PF4V1P10720 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.73□□□□□ -2.13
PF4V1P10720 SNORD111.1-201ENST00000516421 86 ntBASIC1.73□□□□□ -2.13
PF4V1P10720 SNORA18.7-201ENST00000516910 131 ntBASIC1.73□□□□□ -2.13
PF4V1P10720 AP002392.1-201ENST00000537692 208 ntBASIC1.73□□□□□ -2.13
PF4V1P10720 SNRPGP19-201ENST00000603826 189 ntBASIC1.73□□□□□ -2.13
PF4V1P10720 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PF4V1P10720 SNORA1.2-201ENST00000365189 134 ntBASIC1.72□□□□□ -2.13
PF4V1P10720 U8.17-201ENST00000391292 132 ntBASIC1.72□□□□□ -2.13
PF4V1P10720 AL445685.2-201ENST00000422551 342 ntBASIC1.72□□□□□ -2.13
PF4V1P10720 RPL39P39-201ENST00000455840 151 ntBASIC1.72□□□□□ -2.13
PF4V1P10720 RNU4-57P-201ENST00000515980 135 ntBASIC1.72□□□□□ -2.13
PF4V1P10720 RNU6-237P-201ENST00000515985 71 ntBASIC1.72□□□□□ -2.13
PF4V1P10720 RNU6-693P-201ENST00000516134 107 ntBASIC1.72□□□□□ -2.13
PF4V1P10720 SNORA81.3-201ENST00000517283 198 ntBASIC1.72□□□□□ -2.13
PF4V1P10720 MIR4769-201ENST00000584126 77 ntBASIC1.72□□□□□ -2.13
PF4V1P10720 AC090425.1-201ENST00000610007 140 ntBASIC1.72□□□□□ -2.13
PF4V1P10720 SNORD114-1-201ENST00000362705 72 ntBASIC1.71□□□□□ -2.14
PF4V1P10720 RNU6-312P-201ENST00000364629 107 ntBASIC1.71□□□□□ -2.14
PF4V1P10720 RNA5SP37-201ENST00000365420 130 ntBASIC1.71□□□□□ -2.14
PF4V1P10720 SNORD61-201ENST00000384252 73 ntBASIC1.71□□□□□ -2.14
PF4V1P10720 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.71□□□□□ -2.14
PF4V1P10720 AC087499.4-201ENST00000448505 178 ntBASIC1.71□□□□□ -2.14
PF4V1P10720 AC012493.3-201ENST00000604494 112 ntBASIC1.71□□□□□ -2.14
PF4V1P10720 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.71□□□□□ -2.14
PF4V1P10720 AC009831.4-201ENST00000620744 325 ntBASIC1.71□□□□□ -2.14
PF4V1P10720 U6.106-201ENST00000636360 105 ntBASIC1.71□□□□□ -2.14
PF4V1P10720 Y_RNA.23-201ENST00000362496 106 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 SNORD115-28-201ENST00000363931 81 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 RNU6-643P-201ENST00000384018 107 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 MIR518F-201ENST00000384973 87 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 MIR520C-201ENST00000385005 87 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 MIR1289-2-201ENST00000408360 111 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.7□□□□□ -2.14
PF4V1P10720 AL445646.1-201ENST00000431784 216 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 snoU13.23-201ENST00000458863 104 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 RNU7-120P-201ENST00000459334 63 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 RNA5SP200-201ENST00000516360 103 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 RN7SKP88-201ENST00000516847 250 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 RNA5SP364-201ENST00000516938 78 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 7SK.8-201ENST00000612110 250 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 7SK.11-201ENST00000615477 250 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 7SK.13-201ENST00000622040 250 ntBASIC1.7□□□□□ -2.14
PF4V1P10720 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PF4V1P10720 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
PF4V1P10720 SNORA64-201ENST00000384674 134 ntBASIC1.69□□□□□ -2.14
PF4V1P10720 RNU6-1067P-201ENST00000384752 107 ntBASIC1.69□□□□□ -2.14
PF4V1P10720 MIR548A2-201ENST00000384956 97 ntBASIC1.69□□□□□ -2.14
PF4V1P10720 AL023284.1-201ENST00000403956 276 ntBASIC1.69□□□□□ -2.14
PF4V1P10720 AL591806.2-201ENST00000433122 173 ntBASIC1.69□□□□□ -2.14
PF4V1P10720 AC108059.2-201ENST00000434626 151 ntBASIC1.69□□□□□ -2.14
PF4V1P10720 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.69□□□□□ -2.14
PF4V1P10720 RNU6-548P-201ENST00000517083 115 ntBASIC1.69□□□□□ -2.14
PF4V1P10720 RNU6-1270P-201ENST00000517128 108 ntBASIC1.69□□□□□ -2.14
PF4V1P10720 AC007751.1-201ENST00000529260 376 ntBASIC1.69□□□□□ -2.14
PF4V1P10720 MIR4764-201ENST00000580680 88 ntBASIC1.69□□□□□ -2.14
PF4V1P10720 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.69□□□□□ -2.14
PF4V1P10720 MIR219B-201ENST00000637023 88 ntBASIC1.69□□□□□ -2.14
PF4V1P10720 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.69□□□□□ -2.14
PF4V1P10720 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
PF4V1P10720 RNU6-1219P-201ENST00000516143 112 ntBASIC1.68□□□□□ -2.14
PF4V1P10720 RNU6-182P-201ENST00000516970 105 ntBASIC1.68□□□□□ -2.14
PF4V1P10720 RNU6-165P-201ENST00000517170 99 ntBASIC1.68□□□□□ -2.14
PF4V1P10720 MIR4431-201ENST00000579990 94 ntBASIC1.68□□□□□ -2.14
PF4V1P10720 MIR378D2-201ENST00000580636 98 ntBASIC1.68□□□□□ -2.14
PF4V1P10720 AP001485.1-201ENST00000604799 199 ntBASIC1.68□□□□□ -2.14
PF4V1P10720 AC134878.1-201ENST00000619901 243 ntBASIC1.68□□□□□ -2.14
PF4V1P10720 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PF4V1P10720 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PF4V1P10720 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
PF4V1P10720 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
PF4V1P10720 SNORA48.3-201ENST00000391081 134 ntBASIC1.67□□□□□ -2.14
PF4V1P10720 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.67□□□□□ -2.14
PF4V1P10720 MTND5P15-201ENST00000434246 349 ntBASIC1.67□□□□□ -2.14
PF4V1P10720 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.67□□□□□ -2.14
PF4V1P10720 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
PF4V1P10720 SNORD116-25-201ENST00000516517 92 ntBASIC1.67□□□□□ -2.14
PF4V1P10720 AC022559.1-201ENST00000520905 205 ntBASIC1.67□□□□□ -2.14
PF4V1P10720 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.67□□□□□ -2.14
PF4V1P10720 CYP3A52P-201ENST00000563326 91 ntBASIC1.67□□□□□ -2.14
PF4V1P10720 MIR548AR-201ENST00000582191 57 ntBASIC1.67□□□□□ -2.14
PF4V1P10720 AC004792.1-201ENST00000614523 137 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms