Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC062016.1-201ENST00000355719 319 ntBASIC2.77□□□□□ -1.97
PDGFAP04085 MIR302B-201ENST00000362188 73 ntBASIC2.77□□□□□ -1.97
PDGFAP04085 MIR450A1-201ENST00000362262 91 ntBASIC2.77□□□□□ -1.97
PDGFAP04085 RNU4-82P-201ENST00000362443 140 ntBASIC2.77□□□□□ -1.97
PDGFAP04085 RNU6-112P-201ENST00000363599 104 ntBASIC2.77□□□□□ -1.97
PDGFAP04085 SNORD88.1-201ENST00000408684 91 ntBASIC2.77□□□□□ -1.97
PDGFAP04085 RNA5SP89-201ENST00000410300 108 ntBASIC2.77□□□□□ -1.97
PDGFAP04085 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.77□□□□□ -1.97
PDGFAP04085 RN7SKP43-201ENST00000516173 320 ntBASIC2.77□□□□□ -1.97
PDGFAP04085 SCARNA16.3-201ENST00000516595 184 ntBASIC2.77□□□□□ -1.97
PDGFAP04085 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PDGFAP04085 AC073325.2-201ENST00000339545 159 ntBASIC2.76□□□□□ -1.97
PDGFAP04085 RNU6-1298P-201ENST00000362456 101 ntBASIC2.76□□□□□ -1.97
PDGFAP04085 RNU6-414P-201ENST00000363705 104 ntBASIC2.76□□□□□ -1.97
PDGFAP04085 RNU6-106P-201ENST00000384405 107 ntBASIC2.76□□□□□ -1.97
PDGFAP04085 Y_RNA.549-201ENST00000384657 102 ntBASIC2.76□□□□□ -1.97
PDGFAP04085 MIR136-201ENST00000385207 82 ntBASIC2.76□□□□□ -1.97
PDGFAP04085 MIR181B1-201ENST00000385240 110 ntBASIC2.76□□□□□ -1.97
PDGFAP04085 AL590004.2-201ENST00000404787 371 ntBASIC2.76□□□□□ -1.97
PDGFAP04085 snoU13.27-201ENST00000459278 104 ntBASIC2.76□□□□□ -1.97
PDGFAP04085 RNU7-123P-201ENST00000515911 60 ntBASIC2.76□□□□□ -1.97
PDGFAP04085 RNU7-181P-201ENST00000517234 74 ntBASIC2.76□□□□□ -1.97
PDGFAP04085 AL513423.1-201ENST00000621695 132 ntBASIC2.76□□□□□ -1.97
PDGFAP04085 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.76□□□□□ -1.97
PDGFAP04085 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.76□□□□□ -1.97
PDGFAP04085 Y_RNA.43-201ENST00000362670 111 ntBASIC2.75□□□□□ -1.97
PDGFAP04085 Y_RNA.495-201ENST00000384435 112 ntBASIC2.75□□□□□ -1.97
PDGFAP04085 RNU6-296P-201ENST00000384608 107 ntBASIC2.75□□□□□ -1.97
PDGFAP04085 RNA5SP184-201ENST00000411071 108 ntBASIC2.75□□□□□ -1.97
PDGFAP04085 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.75□□□□□ -1.97
PDGFAP04085 AC079600.2-201ENST00000550076 130 ntBASIC2.75□□□□□ -1.97
PDGFAP04085 SNORD14A-201ENST00000606526 91 ntBASIC2.75□□□□□ -1.97
PDGFAP04085 AC021506.2-201ENST00000612354 169 ntBASIC2.75□□□□□ -1.97
PDGFAP04085 MIR6715A-201ENST00000615929 79 ntBASIC2.75□□□□□ -1.97
PDGFAP04085 AL161431.1-201ENST00000618966 4205 ntBASIC2.75□□□□□ -1.97
PDGFAP04085 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PDGFAP04085 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.75□□□□□ -1.97
PDGFAP04085 SNORA63.5-201ENST00000363548 123 ntBASIC2.74□□□□□ -1.97
PDGFAP04085 RNU4-16P-201ENST00000364737 141 ntBASIC2.74□□□□□ -1.97
PDGFAP04085 SNORA70.7-201ENST00000384159 133 ntBASIC2.74□□□□□ -1.97
PDGFAP04085 MIR516B2-201ENST00000385190 85 ntBASIC2.74□□□□□ -1.97
PDGFAP04085 MIR1302-5-201ENST00000408164 150 ntBASIC2.74□□□□□ -1.97
PDGFAP04085 RNU6-554P-201ENST00000410466 106 ntBASIC2.74□□□□□ -1.97
PDGFAP04085 AP004217.1-201ENST00000480579 346 ntBASIC2.74□□□□□ -1.97
PDGFAP04085 RNU6-826P-201ENST00000516827 104 ntBASIC2.74□□□□□ -1.97
PDGFAP04085 IGKV3-31-201ENST00000523109 329 ntBASIC2.74□□□□□ -1.97
PDGFAP04085 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.74□□□□□ -1.97
PDGFAP04085 AL035470.1-201ENST00000622571 220 ntBASIC2.74□□□□□ -1.97
PDGFAP04085 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.74□□□□□ -1.97
PDGFAP04085 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.74□□□□□ -1.97
PDGFAP04085 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
PDGFAP04085 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.73□□□□□ -1.97
PDGFAP04085 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDGFAP04085 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
PDGFAP04085 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PDGFAP04085 VTRNA1-1-201ENST00000363120 99 ntBASIC2.73□□□□□ -1.97
PDGFAP04085 Y_RNA.362-201ENST00000365518 110 ntBASIC2.73□□□□□ -1.97
PDGFAP04085 MIR3163-201ENST00000581592 73 ntBASIC2.73□□□□□ -1.97
PDGFAP04085 AC009831.4-201ENST00000620744 325 ntBASIC2.73□□□□□ -1.97
PDGFAP04085 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.73□□□□□ -1.97
PDGFAP04085 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.73□□□□□ -1.97
PDGFAP04085 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDGFAP04085 AC009487.2-201ENST00000420969 6821 ntBASIC2.72□□□□□ -1.97
PDGFAP04085 RNA5SP432-201ENST00000362480 116 ntBASIC2.72□□□□□ -1.97
PDGFAP04085 Y_RNA.163-201ENST00000363702 113 ntBASIC2.72□□□□□ -1.97
PDGFAP04085 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.72□□□□□ -1.97
PDGFAP04085 MIR660-201ENST00000385235 97 ntBASIC2.72□□□□□ -1.97
PDGFAP04085 HMGN2P35-201ENST00000412164 270 ntBASIC2.72□□□□□ -1.97
PDGFAP04085 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.72□□□□□ -1.97
PDGFAP04085 UBL5P3-201ENST00000475112 231 ntBASIC2.72□□□□□ -1.97
PDGFAP04085 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.72□□□□□ -1.97
PDGFAP04085 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDGFAP04085 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PDGFAP04085 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
PDGFAP04085 Y_RNA.323-201ENST00000365157 109 ntBASIC2.71□□□□□ -1.98
PDGFAP04085 Y_RNA.370-201ENST00000365589 108 ntBASIC2.71□□□□□ -1.98
PDGFAP04085 RNU6-1014P-201ENST00000383940 103 ntBASIC2.71□□□□□ -1.98
PDGFAP04085 PGBD4P5-201ENST00000445958 426 ntBASIC2.71□□□□□ -1.98
PDGFAP04085 AC093850.1-201ENST00000454121 251 ntBASIC2.71□□□□□ -1.98
PDGFAP04085 RNU2-11P-201ENST00000459191 187 ntBASIC2.71□□□□□ -1.98
PDGFAP04085 MIR4529-201ENST00000578110 78 ntBASIC2.71□□□□□ -1.98
PDGFAP04085 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.71□□□□□ -1.98
PDGFAP04085 HSPE1P19-201ENST00000603327 295 ntBASIC2.71□□□□□ -1.98
PDGFAP04085 AC007318.2-201ENST00000620999 243 ntBASIC2.71□□□□□ -1.98
PDGFAP04085 SNORD3E-202ENST00000627253 216 ntBASIC2.71□□□□□ -1.98
PDGFAP04085 AC096644.4-201ENST00000563417 2912 ntBASIC2.7□□□□□ -1.98
PDGFAP04085 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PDGFAP04085 Y_RNA.494-201ENST00000384432 111 ntBASIC2.7□□□□□ -1.98
PDGFAP04085 MIR1261-201ENST00000408659 82 ntBASIC2.7□□□□□ -1.98
PDGFAP04085 AL022718.1-201ENST00000412004 84 ntBASIC2.7□□□□□ -1.98
PDGFAP04085 AC087499.2-201ENST00000432861 149 ntBASIC2.7□□□□□ -1.98
PDGFAP04085 RPL39P34-201ENST00000477141 156 ntBASIC2.7□□□□□ -1.98
PDGFAP04085 RNU2-35P-201ENST00000516446 142 ntBASIC2.7□□□□□ -1.98
PDGFAP04085 Y_RNA.694-201ENST00000516677 117 ntBASIC2.7□□□□□ -1.98
PDGFAP04085 RNU6-94P-201ENST00000607728 107 ntBASIC2.7□□□□□ -1.98
PDGFAP04085 AC106754.2-201ENST00000623006 233 ntBASIC2.7□□□□□ -1.98
PDGFAP04085 AC021613.1-201ENST00000623880 111 ntBASIC2.7□□□□□ -1.98
PDGFAP04085 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDGFAP04085 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.69□□□□□ -1.98
PDGFAP04085 RNU6-766P-201ENST00000362478 107 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms