Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 Y_RNA.353-201ENST00000365440 108 ntBASIC2.54□□□□□ -2
VAMP4O75379 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.54□□□□□ -2
VAMP4O75379 HMGN2P39-201ENST00000398005 273 ntBASIC2.54□□□□□ -2
VAMP4O75379 RNA5SP338-201ENST00000410495 85 ntBASIC2.54□□□□□ -2
VAMP4O75379 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.54□□□□□ -2
VAMP4O75379 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.54□□□□□ -2
VAMP4O75379 MIR3129-201ENST00000581095 76 ntBASIC2.54□□□□□ -2
VAMP4O75379 SNORA28-201ENST00000606769 126 ntBASIC2.54□□□□□ -2
VAMP4O75379 AP000553.5-201ENST00000641933 54 ntBASIC2.54□□□□□ -2
VAMP4O75379 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
VAMP4O75379 SNORD14E-201ENST00000364009 85 ntBASIC2.53□□□□□ -2
VAMP4O75379 MIR518A2-201ENST00000384966 87 ntBASIC2.53□□□□□ -2
VAMP4O75379 SNRPGP14-201ENST00000435400 219 ntBASIC2.53□□□□□ -2
VAMP4O75379 AL158147.1-201ENST00000443970 75 ntBASIC2.53□□□□□ -2
VAMP4O75379 RNU6-717P-201ENST00000459076 104 ntBASIC2.53□□□□□ -2
VAMP4O75379 SNORD45.4-201ENST00000516629 73 ntBASIC2.53□□□□□ -2
VAMP4O75379 Y_RNA.712-201ENST00000517011 92 ntBASIC2.53□□□□□ -2
VAMP4O75379 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VAMP4O75379 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
VAMP4O75379 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VAMP4O75379 Y_RNA.294-201ENST00000364916 102 ntBASIC2.52□□□□□ -2.01
VAMP4O75379 MIR802-201ENST00000390235 94 ntBASIC2.52□□□□□ -2.01
VAMP4O75379 MIR1261-201ENST00000408659 82 ntBASIC2.52□□□□□ -2.01
VAMP4O75379 HMGN2P3-201ENST00000433603 273 ntBASIC2.52□□□□□ -2.01
VAMP4O75379 HMGN2P5-201ENST00000436882 273 ntBASIC2.52□□□□□ -2.01
VAMP4O75379 MTATP6P21-201ENST00000440681 189 ntBASIC2.52□□□□□ -2.01
VAMP4O75379 Y_RNA.690-201ENST00000516603 95 ntBASIC2.52□□□□□ -2.01
VAMP4O75379 MIR4529-201ENST00000578110 78 ntBASIC2.52□□□□□ -2.01
VAMP4O75379 MIR5094-201ENST00000578766 85 ntBASIC2.52□□□□□ -2.01
VAMP4O75379 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.52□□□□□ -2.01
VAMP4O75379 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VAMP4O75379 Y_RNA.114-201ENST00000363265 113 ntBASIC2.51□□□□□ -2.01
VAMP4O75379 RNU6-268P-201ENST00000364174 107 ntBASIC2.51□□□□□ -2.01
VAMP4O75379 SNORA63D-201ENST00000364359 132 ntBASIC2.51□□□□□ -2.01
VAMP4O75379 RNU6-950P-201ENST00000384651 107 ntBASIC2.51□□□□□ -2.01
VAMP4O75379 MIR597-201ENST00000384968 97 ntBASIC2.51□□□□□ -2.01
VAMP4O75379 MIR518F-201ENST00000384973 87 ntBASIC2.51□□□□□ -2.01
VAMP4O75379 MIR17-201ENST00000385012 84 ntBASIC2.51□□□□□ -2.01
VAMP4O75379 SNORD77.3-201ENST00000391113 65 ntBASIC2.51□□□□□ -2.01
VAMP4O75379 AF228730.3-201ENST00000436691 102 ntBASIC2.51□□□□□ -2.01
VAMP4O75379 RPS27P21-201ENST00000486977 252 ntBASIC2.51□□□□□ -2.01
VAMP4O75379 RNU6-1270P-201ENST00000517128 108 ntBASIC2.51□□□□□ -2.01
VAMP4O75379 MIR4287-201ENST00000579398 78 ntBASIC2.51□□□□□ -2.01
VAMP4O75379 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
VAMP4O75379 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
VAMP4O75379 RNU6-309P-201ENST00000364573 106 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 Y_RNA.410-201ENST00000383992 113 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 SNORA48.1-201ENST00000390879 135 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 RN7SKP200-201ENST00000410564 320 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 AL158823.1-201ENST00000418441 478 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.5□□□□□ -2.01
VAMP4O75379 HMGN2P32-201ENST00000444648 269 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 AC090255.1-201ENST00000495779 349 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 SNORA31.10-201ENST00000516482 106 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 MIR514B-201ENST00000516774 80 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 RNU1-40P-201ENST00000516816 164 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 RNU1-97P-201ENST00000516872 164 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 AC104984.5-201ENST00000586878 94 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 AC134878.1-201ENST00000619901 243 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 AC027279.3-201ENST00000625055 122 ntBASIC2.5□□□□□ -2.01
VAMP4O75379 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VAMP4O75379 RNU6-647P-201ENST00000364243 107 ntBASIC2.49□□□□□ -2.01
VAMP4O75379 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VAMP4O75379 RNU7-107P-201ENST00000459121 61 ntBASIC2.49□□□□□ -2.01
VAMP4O75379 RNA5SP236-201ENST00000516169 116 ntBASIC2.49□□□□□ -2.01
VAMP4O75379 SUB1P4-201ENST00000566062 339 ntBASIC2.49□□□□□ -2.01
VAMP4O75379 AC002984.1-201ENST00000591692 448 ntBASIC2.49□□□□□ -2.01
VAMP4O75379 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.49□□□□□ -2.01
VAMP4O75379 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VAMP4O75379 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.48□□□□□ -2.01
VAMP4O75379 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VAMP4O75379 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.48□□□□□ -2.01
VAMP4O75379 MIRLET7C-201ENST00000362160 84 ntBASIC2.48□□□□□ -2.01
VAMP4O75379 Y_RNA.81-201ENST00000362997 102 ntBASIC2.48□□□□□ -2.01
VAMP4O75379 RNU6-215P-201ENST00000365169 102 ntBASIC2.48□□□□□ -2.01
VAMP4O75379 RNA5SP37-201ENST00000365420 130 ntBASIC2.48□□□□□ -2.01
VAMP4O75379 MIR548O-201ENST00000408583 114 ntBASIC2.48□□□□□ -2.01
VAMP4O75379 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.48□□□□□ -2.01
VAMP4O75379 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.48□□□□□ -2.01
VAMP4O75379 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.48□□□□□ -2.01
VAMP4O75379 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VAMP4O75379 MTND5P32-201ENST00000560711 1802 ntBASIC2.47□□□□□ -2.01
VAMP4O75379 RNU6-235P-201ENST00000362644 107 ntBASIC2.47□□□□□ -2.01
VAMP4O75379 SNORD20-201ENST00000384550 80 ntBASIC2.47□□□□□ -2.01
VAMP4O75379 Y_RNA.617-201ENST00000410920 90 ntBASIC2.47□□□□□ -2.01
VAMP4O75379 STAG3L5P-204ENST00000443759 179 ntBASIC2.47□□□□□ -2.01
VAMP4O75379 CYCTP-201ENST00000504253 315 ntBASIC2.47□□□□□ -2.01
VAMP4O75379 RNVU1-2-201ENST00000516326 135 ntBASIC2.47□□□□□ -2.01
VAMP4O75379 SCARNA15-202ENST00000516881 127 ntBASIC2.47□□□□□ -2.01
VAMP4O75379 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.47□□□□□ -2.01
VAMP4O75379 AL022345.2-201ENST00000606307 135 ntBASIC2.47□□□□□ -2.01
VAMP4O75379 SNORD115-28-201ENST00000363931 81 ntBASIC2.46□□□□□ -2.02
VAMP4O75379 SNORA16B-201ENST00000364674 135 ntBASIC2.46□□□□□ -2.02
VAMP4O75379 Y_RNA.547-201ENST00000384654 119 ntBASIC2.46□□□□□ -2.02
VAMP4O75379 MIR520A-201ENST00000384862 85 ntBASIC2.46□□□□□ -2.02
VAMP4O75379 U8.13-201ENST00000390842 128 ntBASIC2.46□□□□□ -2.02
VAMP4O75379 AL034345.1-201ENST00000407768 123 ntBASIC2.46□□□□□ -2.02
VAMP4O75379 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.46□□□□□ -2.02
VAMP4O75379 AC055731.1-201ENST00000474387 401 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms