Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AC123900.1-201ENST00000420390 96 ntBASIC3.29□□□□□ -1.88
H3BM21 MIR5004-201ENST00000579078 107 ntBASIC3.29□□□□□ -1.88
H3BM21 MIR4765-201ENST00000585007 77 ntBASIC3.29□□□□□ -1.88
H3BM21 uc_338.25-201ENST00000613756 156 ntBASIC3.29□□□□□ -1.88
H3BM21 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H3BM21 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H3BM21 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3BM21 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3BM21 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3BM21 SNORA63.2-201ENST00000362603 126 ntBASIC3.28□□□□□ -1.88
H3BM21 RNU6-471P-201ENST00000383944 106 ntBASIC3.28□□□□□ -1.88
H3BM21 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.28□□□□□ -1.88
H3BM21 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.28□□□□□ -1.88
H3BM21 UBL5P3-201ENST00000475112 231 ntBASIC3.28□□□□□ -1.88
H3BM21 AC006483.1-201ENST00000487308 313 ntBASIC3.28□□□□□ -1.88
H3BM21 RN7SL504P-201ENST00000494496 287 ntBASIC3.28□□□□□ -1.88
H3BM21 RPL23AP94-201ENST00000512518 302 ntBASIC3.28□□□□□ -1.88
H3BM21 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.28□□□□□ -1.88
H3BM21 Y_RNA.681-201ENST00000516445 113 ntBASIC3.28□□□□□ -1.88
H3BM21 RNU6-826P-201ENST00000516827 104 ntBASIC3.28□□□□□ -1.88
H3BM21 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.28□□□□□ -1.88
H3BM21 MIR4325-201ENST00000583049 90 ntBASIC3.28□□□□□ -1.88
H3BM21 U6.111-201ENST00000636093 83 ntBASIC3.28□□□□□ -1.88
H3BM21 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
H3BM21 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
H3BM21 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
H3BM21 MAPK10-362ENST00000641864 4484 ntBASIC3.28□□□□□ -1.88
H3BM21 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
H3BM21 MIR340-201ENST00000362125 95 ntBASIC3.27□□□□□ -1.89
H3BM21 Y_RNA.173-201ENST00000363776 113 ntBASIC3.27□□□□□ -1.89
H3BM21 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.27□□□□□ -1.89
H3BM21 RNU7-94P-201ENST00000459576 63 ntBASIC3.27□□□□□ -1.89
H3BM21 RNA5SP112-201ENST00000515937 99 ntBASIC3.27□□□□□ -1.89
H3BM21 IGLV3-17-201ENST00000519099 244 ntBASIC3.27□□□□□ -1.89
H3BM21 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.27□□□□□ -1.89
H3BM21 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.27□□□□□ -1.89
H3BM21 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
H3BM21 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.27□□□□□ -1.89
H3BM21 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
H3BM21 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
H3BM21 RNU6-865P-201ENST00000364772 107 ntBASIC3.26□□□□□ -1.89
H3BM21 Y_RNA.332-201ENST00000365271 113 ntBASIC3.26□□□□□ -1.89
H3BM21 RNU6-499P-201ENST00000365615 107 ntBASIC3.26□□□□□ -1.89
H3BM21 Y_RNA.532-201ENST00000384590 113 ntBASIC3.26□□□□□ -1.89
H3BM21 RNA5SP323-201ENST00000391094 133 ntBASIC3.26□□□□□ -1.89
H3BM21 SNORD59.2-201ENST00000516873 68 ntBASIC3.26□□□□□ -1.89
H3BM21 MIR4484-201ENST00000582855 83 ntBASIC3.26□□□□□ -1.89
H3BM21 AL162274.2-201ENST00000614406 332 ntBASIC3.26□□□□□ -1.89
H3BM21 MIR6852-201ENST00000621699 66 ntBASIC3.26□□□□□ -1.89
H3BM21 CTSLP2-204ENST00000629029 392 ntBASIC3.26□□□□□ -1.89
H3BM21 MIR338-201ENST00000636369 67 ntBASIC3.26□□□□□ -1.89
H3BM21 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
H3BM21 RNU6-161P-201ENST00000363051 106 ntBASIC3.25□□□□□ -1.89
H3BM21 RNU6-480P-201ENST00000384332 107 ntBASIC3.25□□□□□ -1.89
H3BM21 Y_RNA.500-201ENST00000384466 111 ntBASIC3.25□□□□□ -1.89
H3BM21 SNORA8-201ENST00000384574 139 ntBASIC3.25□□□□□ -1.89
H3BM21 RNU6-540P-201ENST00000384622 101 ntBASIC3.25□□□□□ -1.89
H3BM21 MIR767-201ENST00000390228 109 ntBASIC3.25□□□□□ -1.89
H3BM21 RNU1-101P-201ENST00000391171 127 ntBASIC3.25□□□□□ -1.89
H3BM21 RN7SKP192-201ENST00000411291 327 ntBASIC3.25□□□□□ -1.89
H3BM21 AC006539.3-201ENST00000454258 129 ntBASIC3.25□□□□□ -1.89
H3BM21 RN7SL442P-201ENST00000473804 320 ntBASIC3.25□□□□□ -1.89
H3BM21 RNU6-1041P-201ENST00000516254 102 ntBASIC3.25□□□□□ -1.89
H3BM21 MIR2276-201ENST00000516886 89 ntBASIC3.25□□□□□ -1.89
H3BM21 RNU7-181P-201ENST00000517234 74 ntBASIC3.25□□□□□ -1.89
H3BM21 MIR3124-201ENST00000582636 67 ntBASIC3.25□□□□□ -1.89
H3BM21 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.25□□□□□ -1.89
H3BM21 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
H3BM21 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.24□□□□□ -1.89
H3BM21 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
H3BM21 RNA5SP374-201ENST00000362939 125 ntBASIC3.24□□□□□ -1.89
H3BM21 Y_RNA.448-201ENST00000384185 108 ntBASIC3.24□□□□□ -1.89
H3BM21 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
H3BM21 SNORA26.6-201ENST00000391256 115 ntBASIC3.24□□□□□ -1.89
H3BM21 RNU6-587P-201ENST00000391282 106 ntBASIC3.24□□□□□ -1.89
H3BM21 MIR1267-201ENST00000408723 78 ntBASIC3.24□□□□□ -1.89
H3BM21 RPS27P29-201ENST00000463110 252 ntBASIC3.24□□□□□ -1.89
H3BM21 uc_338.1-201ENST00000612113 180 ntBASIC3.24□□□□□ -1.89
H3BM21 AC012676.2-201ENST00000619258 186 ntBASIC3.24□□□□□ -1.89
H3BM21 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.24□□□□□ -1.89
H3BM21 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
H3BM21 RNU1-105P-201ENST00000363470 161 ntBASIC3.23□□□□□ -1.89
H3BM21 RNA5SP138-201ENST00000365098 114 ntBASIC3.23□□□□□ -1.89
H3BM21 RNA5SP482-201ENST00000391269 118 ntBASIC3.23□□□□□ -1.89
H3BM21 RNA5SP261-201ENST00000410536 106 ntBASIC3.23□□□□□ -1.89
H3BM21 Y_RNA.660-201ENST00000516002 120 ntBASIC3.23□□□□□ -1.89
H3BM21 RNU6-1108P-201ENST00000516308 104 ntBASIC3.23□□□□□ -1.89
H3BM21 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.23□□□□□ -1.89
H3BM21 RNU6-807P-201ENST00000516805 107 ntBASIC3.23□□□□□ -1.89
H3BM21 FAM106DP-201ENST00000586416 501 ntBASIC3.23□□□□□ -1.89
H3BM21 SNORD3E-202ENST00000627253 216 ntBASIC3.23□□□□□ -1.89
H3BM21 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
H3BM21 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.23□□□□□ -1.89
H3BM21 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
H3BM21 RNU6-546P-201ENST00000383991 107 ntBASIC3.22□□□□□ -1.89
H3BM21 RNU6-424P-201ENST00000384367 105 ntBASIC3.22□□□□□ -1.89
H3BM21 MIR9-2-201ENST00000384838 87 ntBASIC3.22□□□□□ -1.89
H3BM21 RNU2-63P-201ENST00000410792 194 ntBASIC3.22□□□□□ -1.89
H3BM21 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.22□□□□□ -1.89
H3BM21 CST9LP2-201ENST00000437612 320 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms