Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AL365265.1-201ENST00000621045 234 ntBASIC1.22□□□□□ -2.21
TRIM49BA6NDI0 Y_RNA.82-201ENST00000363000 102 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.92-201ENST00000363043 102 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 RNU6-653P-201ENST00000363074 106 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 RNU6-379P-201ENST00000363813 104 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.235-201ENST00000364412 102 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.292-201ENST00000364904 97 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.306-201ENST00000365015 102 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.312-201ENST00000365089 102 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.322-201ENST00000365151 102 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 AC245047.8-201ENST00000456455 284 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.650-201ENST00000459002 102 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 RNU6-561P-201ENST00000516222 102 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 RNU6-917P-201ENST00000516294 104 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.679-201ENST00000516416 91 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 RN7SKP88-201ENST00000516847 250 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 RNA5SP102-201ENST00000516865 106 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.777-201ENST00000516982 102 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 MIR4282-201ENST00000583613 67 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.771-201ENST00000598668 102 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 7SK.8-201ENST00000612110 250 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 7SK.11-201ENST00000615477 250 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 7SK.13-201ENST00000622040 250 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.789-201ENST00000622480 102 ntBASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRIM49BA6NDI0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRIM49BA6NDI0 RNU6-899P-201ENST00000363947 107 ntBASIC1.2□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.308-201ENST00000365043 101 ntBASIC1.2□□□□□ -2.22
TRIM49BA6NDI0 MIR516B2-201ENST00000385190 85 ntBASIC1.2□□□□□ -2.22
TRIM49BA6NDI0 RN7SKP200-201ENST00000410564 320 ntBASIC1.2□□□□□ -2.22
TRIM49BA6NDI0 RNU7-94P-201ENST00000459576 63 ntBASIC1.2□□□□□ -2.22
TRIM49BA6NDI0 RNU6-1271P-201ENST00000517049 105 ntBASIC1.2□□□□□ -2.22
TRIM49BA6NDI0 AC022559.1-201ENST00000520905 205 ntBASIC1.2□□□□□ -2.22
TRIM49BA6NDI0 MIR4308-201ENST00000580634 81 ntBASIC1.2□□□□□ -2.22
TRIM49BA6NDI0 AL021707.8-201ENST00000609428 183 ntBASIC1.2□□□□□ -2.22
TRIM49BA6NDI0 AL442067.1-201ENST00000613261 223 ntBASIC1.2□□□□□ -2.22
TRIM49BA6NDI0 MIR6504-201ENST00000613520 61 ntBASIC1.2□□□□□ -2.22
TRIM49BA6NDI0 SNORD3E-202ENST00000627253 216 ntBASIC1.2□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.20-201ENST00000362479 113 ntBASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.229-201ENST00000364347 113 ntBASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.274-201ENST00000364714 101 ntBASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 RNU6-47P-201ENST00000383866 107 ntBASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 MIR660-201ENST00000385235 97 ntBASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 AL034345.1-201ENST00000407768 123 ntBASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 RNU7-12P-201ENST00000516030 62 ntBASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 RNU6-1023P-201ENST00000516137 106 ntBASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 RNU7-40P-201ENST00000516397 64 ntBASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 AC004817.2-201ENST00000561794 651 ntBASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 AC130289.1-201ENST00000577321 73 ntBASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 AC120024.3-201ENST00000603167 156 ntBASIC1.19□□□□□ -2.22
TRIM49BA6NDI0 RNA5SP327-201ENST00000362494 101 ntBASIC1.18□□□□□ -2.22
TRIM49BA6NDI0 RNY4P28-201ENST00000365281 93 ntBASIC1.18□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.556-201ENST00000384677 113 ntBASIC1.18□□□□□ -2.22
TRIM49BA6NDI0 RNU6-1228P-201ENST00000391014 107 ntBASIC1.18□□□□□ -2.22
TRIM49BA6NDI0 MIR548H3-201ENST00000408771 118 ntBASIC1.18□□□□□ -2.22
TRIM49BA6NDI0 RNU6-922P-201ENST00000516753 99 ntBASIC1.18□□□□□ -2.22
TRIM49BA6NDI0 RNU7-116P-201ENST00000516940 62 ntBASIC1.18□□□□□ -2.22
TRIM49BA6NDI0 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
TRIM49BA6NDI0 MIR367-201ENST00000362299 68 ntBASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.188-201ENST00000363952 111 ntBASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.224-201ENST00000364308 111 ntBASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 U8.5-201ENST00000364528 136 ntBASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 SNORA20.1-201ENST00000364790 130 ntBASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 RNU6-163P-201ENST00000384396 106 ntBASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 MIR562-201ENST00000384894 95 ntBASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.626-201ENST00000411288 95 ntBASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 SNORD45.4-201ENST00000516629 73 ntBASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 MIR3664-201ENST00000579074 99 ntBASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 AC090425.1-201ENST00000610007 140 ntBASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 MIR7111-201ENST00000619751 72 ntBASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.17□□□□□ -2.22
TRIM49BA6NDI0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.116-201ENST00000363292 103 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 RNU6-674P-201ENST00000363831 107 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.304-201ENST00000365011 112 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.355-201ENST00000365462 98 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.508-201ENST00000384502 114 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 MIR626-201ENST00000385032 94 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 SNORD41-201ENST00000386967 70 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 RNU6-1248P-201ENST00000391096 64 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 RNU6-131P-201ENST00000391144 107 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 RNU6-381P-201ENST00000391259 108 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 RNA5SP482-201ENST00000391269 118 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 Y_RNA.622-201ENST00000411091 108 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 SNRPGP14-201ENST00000435400 219 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 RNU6-1007P-201ENST00000516586 107 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 AC090142.3-201ENST00000519012 385 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 MIR4762-201ENST00000585261 75 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 AC006006.1-201ENST00000603082 144 ntBASIC1.16□□□□□ -2.22
TRIM49BA6NDI0 AL513423.1-201ENST00000621695 132 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms