Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 RNU6-1292P-201ENST00000383856 107 ntBASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 SNORA1-201ENST00000384107 130 ntBASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 MIR548A2-201ENST00000384956 97 ntBASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 SNRPGP13-201ENST00000442212 177 ntBASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 AC104435.1-201ENST00000483483 166 ntBASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 RNA5SP200-201ENST00000516360 103 ntBASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 SNORA31.15-201ENST00000516771 132 ntBASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 MIR3129-201ENST00000581095 76 ntBASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 MIR5002-201ENST00000584713 97 ntBASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 MIR7843-201ENST00000622274 79 ntBASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 SNORA63D-201ENST00000364359 132 ntBASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 snoU2-30.1-201ENST00000365012 70 ntBASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 SNORA64-201ENST00000384674 134 ntBASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 RNU6-693P-201ENST00000516134 107 ntBASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 SNORA31.10-201ENST00000516482 106 ntBASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 Y_RNA.686-201ENST00000516548 134 ntBASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 RNU6-1270P-201ENST00000517128 108 ntBASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 RNU1-104P-201ENST00000517280 175 ntBASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 AC006441.5-201ENST00000612680 209 ntBASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.45□□□□□ -2.02
PCDHA2Q9Y5H9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 RNU6-1084P-201ENST00000362498 107 ntBASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 SNORD14E-201ENST00000364009 85 ntBASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 RNU6-442P-201ENST00000383968 104 ntBASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 MIR802-201ENST00000390235 94 ntBASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 SNORA48.1-201ENST00000390879 135 ntBASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 MIR891A-201ENST00000401237 79 ntBASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 RNU6-735P-201ENST00000410612 107 ntBASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 STAG3L5P-204ENST00000443759 179 ntBASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 RNVU1-2-201ENST00000516326 135 ntBASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 Y_RNA.692-201ENST00000516627 105 ntBASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 RNU2-60P-201ENST00000517290 128 ntBASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 SNORA28-201ENST00000606769 126 ntBASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 MIR219B-201ENST00000637023 88 ntBASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHA2Q9Y5H9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PCDHA2Q9Y5H9 Y_RNA.52-201ENST00000362760 96 ntBASIC2.43□□□□□ -2.02
PCDHA2Q9Y5H9 MIR518F-201ENST00000384973 87 ntBASIC2.43□□□□□ -2.02
PCDHA2Q9Y5H9 AL603914.1-201ENST00000401964 204 ntBASIC2.43□□□□□ -2.02
PCDHA2Q9Y5H9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHA2Q9Y5H9 SNRPGP14-201ENST00000435400 219 ntBASIC2.43□□□□□ -2.02
PCDHA2Q9Y5H9 RNU6-659P-201ENST00000516454 104 ntBASIC2.43□□□□□ -2.02
PCDHA2Q9Y5H9 SNORD45.4-201ENST00000516629 73 ntBASIC2.43□□□□□ -2.02
PCDHA2Q9Y5H9 Y_RNA.757-201ENST00000578934 114 ntBASIC2.43□□□□□ -2.02
PCDHA2Q9Y5H9 SNORD14A-201ENST00000606526 91 ntBASIC2.43□□□□□ -2.02
PCDHA2Q9Y5H9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PCDHA2Q9Y5H9 RNA5SP432-201ENST00000362480 116 ntBASIC2.42□□□□□ -2.02
PCDHA2Q9Y5H9 Y_RNA.280-201ENST00000364765 112 ntBASIC2.42□□□□□ -2.02
PCDHA2Q9Y5H9 Y_RNA.336-201ENST00000365307 109 ntBASIC2.42□□□□□ -2.02
PCDHA2Q9Y5H9 SNORD18B-201ENST00000365659 72 ntBASIC2.42□□□□□ -2.02
PCDHA2Q9Y5H9 Y_RNA.629-201ENST00000411368 105 ntBASIC2.42□□□□□ -2.02
PCDHA2Q9Y5H9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.42□□□□□ -2.02
PCDHA2Q9Y5H9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.42□□□□□ -2.02
PCDHA2Q9Y5H9 SUB1P4-201ENST00000566062 339 ntBASIC2.42□□□□□ -2.02
PCDHA2Q9Y5H9 MIR3121-201ENST00000579680 77 ntBASIC2.42□□□□□ -2.02
PCDHA2Q9Y5H9 MIR6132-201ENST00000622083 109 ntBASIC2.42□□□□□ -2.02
PCDHA2Q9Y5H9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 MIRLET7C-201ENST00000362160 84 ntBASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 RNU6-268P-201ENST00000364174 107 ntBASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 Y_RNA.294-201ENST00000364916 102 ntBASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 SNORA67.3-201ENST00000384366 140 ntBASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 SNORA80E-201ENST00000384744 137 ntBASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 SNORD77.3-201ENST00000391113 65 ntBASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 AL023284.1-201ENST00000403956 276 ntBASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 MIR548O-201ENST00000408583 114 ntBASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 RN7SKP200-201ENST00000410564 320 ntBASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 RNA5SP270-201ENST00000411361 118 ntBASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 MIR5194-201ENST00000582634 120 ntBASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 AP006437.1-201ENST00000641440 3685 ntBASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 AC005336.3-201ENST00000623833 2679 ntBASIC2.41□□□□□ -2.02
PCDHA2Q9Y5H9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
PCDHA2Q9Y5H9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
PCDHA2Q9Y5H9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
PCDHA2Q9Y5H9 RNU1-52P-201ENST00000384190 164 ntBASIC2.4□□□□□ -2.03
PCDHA2Q9Y5H9 RNU6-950P-201ENST00000384651 107 ntBASIC2.4□□□□□ -2.03
PCDHA2Q9Y5H9 SNORA48.3-201ENST00000391081 134 ntBASIC2.4□□□□□ -2.03
PCDHA2Q9Y5H9 MIR1289-2-201ENST00000408360 111 ntBASIC2.4□□□□□ -2.03
PCDHA2Q9Y5H9 RNA5SP501-201ENST00000410990 112 ntBASIC2.4□□□□□ -2.03
PCDHA2Q9Y5H9 AL158823.1-201ENST00000418441 478 ntBASIC2.4□□□□□ -2.03
PCDHA2Q9Y5H9 HSPE1P9-201ENST00000440046 311 ntBASIC2.4□□□□□ -2.03
PCDHA2Q9Y5H9 HMGN2P32-201ENST00000444648 269 ntBASIC2.4□□□□□ -2.03
PCDHA2Q9Y5H9 Y_RNA.690-201ENST00000516603 95 ntBASIC2.4□□□□□ -2.03
PCDHA2Q9Y5H9 AC090049.2-201ENST00000550377 109 ntBASIC2.4□□□□□ -2.03
PCDHA2Q9Y5H9 AL359881.1-201ENST00000602916 267 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms