Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CTDP1Q9Y5B0 SNORD115-3-201ENST00000363100 82 ntBASIC2.42□□□□□ -2.02
CTDP1Q9Y5B0 RNA5SP493-201ENST00000364115 91 ntBASIC2.42□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-1336P-201ENST00000383886 109 ntBASIC2.42□□□□□ -2.02
CTDP1Q9Y5B0 MIR29C-201ENST00000385231 88 ntBASIC2.42□□□□□ -2.02
CTDP1Q9Y5B0 AC019129.1-201ENST00000403786 261 ntBASIC2.42□□□□□ -2.02
CTDP1Q9Y5B0 AL117342.1-201ENST00000404861 406 ntBASIC2.42□□□□□ -2.02
CTDP1Q9Y5B0 CST2P1-201ENST00000425770 87 ntBASIC2.42□□□□□ -2.02
CTDP1Q9Y5B0 SNRPGP10-201ENST00000432323 225 ntBASIC2.42□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-126P-201ENST00000516685 103 ntBASIC2.42□□□□□ -2.02
CTDP1Q9Y5B0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.42□□□□□ -2.02
CTDP1Q9Y5B0 AC092881.1-201ENST00000638218 2733 ntBASIC2.42□□□□□ -2.02
CTDP1Q9Y5B0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-862P-201ENST00000362804 105 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 Y_RNA.71-201ENST00000362892 104 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-1290P-201ENST00000362957 109 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-23P-201ENST00000363283 107 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 RNY1P11-201ENST00000363759 113 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 Y_RNA.218-201ENST00000364218 104 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 Y_RNA.251-201ENST00000364551 99 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 Y_RNA.253-201ENST00000364562 112 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-1138P-201ENST00000365359 106 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 MIR518A2-201ENST00000384966 87 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 Y_RNA.584-201ENST00000391090 114 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 RNU7-94P-201ENST00000459576 63 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 AC024995.1-201ENST00000523014 93 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 MIR4769-201ENST00000584126 77 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 AC097639.2-201ENST00000603159 172 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 AP001340.1-201ENST00000624405 217 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 AC005336.3-201ENST00000623833 2679 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 AL359851.1-201ENST00000569460 4997 ntBASIC2.41□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-915P-201ENST00000364943 103 ntBASIC2.4□□□□□ -2.03
CTDP1Q9Y5B0 Y_RNA.486-201ENST00000384398 107 ntBASIC2.4□□□□□ -2.03
CTDP1Q9Y5B0 RNA5SP450-201ENST00000411206 102 ntBASIC2.4□□□□□ -2.03
CTDP1Q9Y5B0 MTATP6P29-201ENST00000415057 132 ntBASIC2.4□□□□□ -2.03
CTDP1Q9Y5B0 AL445646.1-201ENST00000431784 216 ntBASIC2.4□□□□□ -2.03
CTDP1Q9Y5B0 NDUFA4P2-201ENST00000489989 244 ntBASIC2.4□□□□□ -2.03
CTDP1Q9Y5B0 RNU6-237P-201ENST00000515985 71 ntBASIC2.4□□□□□ -2.03
CTDP1Q9Y5B0 AL358944.1-201ENST00000528537 144 ntBASIC2.4□□□□□ -2.03
CTDP1Q9Y5B0 AC015712.3-201ENST00000559380 164 ntBASIC2.4□□□□□ -2.03
CTDP1Q9Y5B0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.4□□□□□ -2.03
CTDP1Q9Y5B0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.4□□□□□ -2.03
CTDP1Q9Y5B0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 Y_RNA.127-201ENST00000363386 109 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 RNU6-1164P-201ENST00000364428 107 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 Y_RNA.261-201ENST00000364631 102 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 SNORD116-14-201ENST00000383894 92 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 SNORD116-17-201ENST00000383929 92 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 SNORD116-15-201ENST00000384445 92 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 SNORD116-19-201ENST00000384729 92 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 SNORA12.1-201ENST00000390873 148 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 RNU2-40P-201ENST00000410833 196 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 MLLT10P1-201ENST00000418346 262 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 RPS26P45-201ENST00000471748 340 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 AL163195.1-201ENST00000496941 348 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 RNU6-1333P-201ENST00000516162 93 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 RNU6-1234P-201ENST00000516877 103 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 RNU6-548P-201ENST00000517083 115 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 RNU6-365P-201ENST00000517113 106 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 AP002004.2-201ENST00000531656 154 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 AC002984.1-201ENST00000591692 448 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 U7.2-201ENST00000607576 63 ntBASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CTDP1Q9Y5B0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CTDP1Q9Y5B0 MIR126-201ENST00000362291 85 ntBASIC2.38□□□□□ -2.03
CTDP1Q9Y5B0 RNU4-52P-201ENST00000384209 138 ntBASIC2.38□□□□□ -2.03
CTDP1Q9Y5B0 RNU6-735P-201ENST00000410612 107 ntBASIC2.38□□□□□ -2.03
CTDP1Q9Y5B0 AL049830.1-201ENST00000468034 425 ntBASIC2.38□□□□□ -2.03
CTDP1Q9Y5B0 Y_RNA.714-201ENST00000517065 90 ntBASIC2.38□□□□□ -2.03
CTDP1Q9Y5B0 MIR3169-201ENST00000578032 83 ntBASIC2.38□□□□□ -2.03
CTDP1Q9Y5B0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.38□□□□□ -2.03
CTDP1Q9Y5B0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CTDP1Q9Y5B0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CTDP1Q9Y5B0 SNORA1B-201ENST00000362535 133 ntBASIC2.37□□□□□ -2.03
CTDP1Q9Y5B0 RNU6-80P-201ENST00000384195 107 ntBASIC2.37□□□□□ -2.03
CTDP1Q9Y5B0 MIR583-201ENST00000384846 75 ntBASIC2.37□□□□□ -2.03
CTDP1Q9Y5B0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.37□□□□□ -2.03
CTDP1Q9Y5B0 AL591926.4-201ENST00000616895 298 ntBASIC2.37□□□□□ -2.03
CTDP1Q9Y5B0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CTDP1Q9Y5B0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CTDP1Q9Y5B0 SNORD50B-201ENST00000364995 70 ntBASIC2.36□□□□□ -2.03
CTDP1Q9Y5B0 RNA5SP465-201ENST00000391195 109 ntBASIC2.36□□□□□ -2.03
CTDP1Q9Y5B0 AL445685.2-201ENST00000422551 342 ntBASIC2.36□□□□□ -2.03
CTDP1Q9Y5B0 AC099677.2-201ENST00000436385 175 ntBASIC2.36□□□□□ -2.03
CTDP1Q9Y5B0 RNU4-57P-201ENST00000515980 135 ntBASIC2.36□□□□□ -2.03
CTDP1Q9Y5B0 RNU6-504P-201ENST00000516568 104 ntBASIC2.36□□□□□ -2.03
CTDP1Q9Y5B0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.36□□□□□ -2.03
CTDP1Q9Y5B0 MIR4299-201ENST00000577899 72 ntBASIC2.36□□□□□ -2.03
CTDP1Q9Y5B0 Y_RNA.757-201ENST00000578934 114 ntBASIC2.36□□□□□ -2.03
CTDP1Q9Y5B0 AC131055.1-201ENST00000584626 316 ntBASIC2.36□□□□□ -2.03
CTDP1Q9Y5B0 AL359881.1-201ENST00000602916 267 ntBASIC2.36□□□□□ -2.03
CTDP1Q9Y5B0 RNA5SP205-201ENST00000364653 136 ntBASIC2.35□□□□□ -2.03
CTDP1Q9Y5B0 MIR764-201ENST00000390811 85 ntBASIC2.35□□□□□ -2.03
CTDP1Q9Y5B0 SNORD72-201ENST00000390994 80 ntBASIC2.35□□□□□ -2.03
CTDP1Q9Y5B0 RPL23AP6-201ENST00000446637 472 ntBASIC2.35□□□□□ -2.03
CTDP1Q9Y5B0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.35□□□□□ -2.03
CTDP1Q9Y5B0 SNORA18.4-201ENST00000516440 124 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms