Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 Y_RNA.298-201ENST00000364960 107 ntBASIC3.16□□□□□ -1.9
NOD1Q9Y239 RNU6-756P-201ENST00000383997 107 ntBASIC3.16□□□□□ -1.9
NOD1Q9Y239 Y_RNA.454-201ENST00000384224 113 ntBASIC3.16□□□□□ -1.9
NOD1Q9Y239 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.16□□□□□ -1.9
NOD1Q9Y239 AC069257.2-201ENST00000441819 155 ntBASIC3.16□□□□□ -1.9
NOD1Q9Y239 RNU7-164P-201ENST00000459221 62 ntBASIC3.16□□□□□ -1.9
NOD1Q9Y239 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.16□□□□□ -1.9
NOD1Q9Y239 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.16□□□□□ -1.9
NOD1Q9Y239 MIR5582-201ENST00000579697 68 ntBASIC3.16□□□□□ -1.9
NOD1Q9Y239 AC091932.4-201ENST00000623386 200 ntBASIC3.16□□□□□ -1.9
NOD1Q9Y239 AC027279.3-201ENST00000625055 122 ntBASIC3.16□□□□□ -1.9
NOD1Q9Y239 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NOD1Q9Y239 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NOD1Q9Y239 MIR342-201ENST00000362212 99 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 Y_RNA.362-201ENST00000365518 110 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 RNU6-1014P-201ENST00000383940 103 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 MIR597-201ENST00000384968 97 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 RNU11-3P-201ENST00000391111 133 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 AL627390.1-201ENST00000396055 340 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 RN7SKP200-201ENST00000410564 320 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.15□□□□□ -1.91
NOD1Q9Y239 HSPE1P9-201ENST00000440046 311 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 RPL39P34-201ENST00000477141 156 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 RN7SL633P-201ENST00000488974 297 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 SNORA64.4-201ENST00000516632 81 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 SNORA31.26-201ENST00000517250 137 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 MIR4778-201ENST00000577635 80 ntBASIC3.15□□□□□ -1.91
NOD1Q9Y239 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
NOD1Q9Y239 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NOD1Q9Y239 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NOD1Q9Y239 RNU6-766P-201ENST00000362478 107 ntBASIC3.14□□□□□ -1.91
NOD1Q9Y239 RNU6-859P-201ENST00000362728 107 ntBASIC3.14□□□□□ -1.91
NOD1Q9Y239 SNORA51.5-201ENST00000384126 131 ntBASIC3.14□□□□□ -1.91
NOD1Q9Y239 MT-TI-201ENST00000387365 69 ntBASIC3.14□□□□□ -1.91
NOD1Q9Y239 RNY4P30-201ENST00000410216 95 ntBASIC3.14□□□□□ -1.91
NOD1Q9Y239 SNX2P2-201ENST00000424553 323 ntBASIC3.14□□□□□ -1.91
NOD1Q9Y239 MIR3945-201ENST00000581853 98 ntBASIC3.14□□□□□ -1.91
NOD1Q9Y239 MIR4305-201ENST00000583252 102 ntBASIC3.14□□□□□ -1.91
NOD1Q9Y239 AC104984.5-201ENST00000586878 94 ntBASIC3.14□□□□□ -1.91
NOD1Q9Y239 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.14□□□□□ -1.91
NOD1Q9Y239 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NOD1Q9Y239 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.13□□□□□ -1.91
NOD1Q9Y239 SNORA25.6-201ENST00000364121 118 ntBASIC3.13□□□□□ -1.91
NOD1Q9Y239 Y_RNA.241-201ENST00000364470 117 ntBASIC3.13□□□□□ -1.91
NOD1Q9Y239 Y_RNA.328-201ENST00000365208 113 ntBASIC3.13□□□□□ -1.91
NOD1Q9Y239 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NOD1Q9Y239 RNU7-123P-201ENST00000515911 60 ntBASIC3.13□□□□□ -1.91
NOD1Q9Y239 RNU6-830P-201ENST00000516353 107 ntBASIC3.13□□□□□ -1.91
NOD1Q9Y239 IGKV3-31-201ENST00000523109 329 ntBASIC3.13□□□□□ -1.91
NOD1Q9Y239 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.13□□□□□ -1.91
NOD1Q9Y239 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NOD1Q9Y239 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NOD1Q9Y239 Y_RNA.323-201ENST00000365157 109 ntBASIC3.12□□□□□ -1.91
NOD1Q9Y239 AL138827.1-201ENST00000402666 306 ntBASIC3.12□□□□□ -1.91
NOD1Q9Y239 AL034345.1-201ENST00000407768 123 ntBASIC3.12□□□□□ -1.91
NOD1Q9Y239 AC015922.2-201ENST00000435593 184 ntBASIC3.12□□□□□ -1.91
NOD1Q9Y239 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.12□□□□□ -1.91
NOD1Q9Y239 RN7SL442P-201ENST00000473804 320 ntBASIC3.12□□□□□ -1.91
NOD1Q9Y239 RPPH1-2P-201ENST00000516688 293 ntBASIC3.12□□□□□ -1.91
NOD1Q9Y239 RNA5SP137-201ENST00000516833 135 ntBASIC3.12□□□□□ -1.91
NOD1Q9Y239 HSPE1P19-201ENST00000603327 295 ntBASIC3.12□□□□□ -1.91
NOD1Q9Y239 RNU6-94P-201ENST00000607728 107 ntBASIC3.12□□□□□ -1.91
NOD1Q9Y239 MIR6715A-201ENST00000615929 79 ntBASIC3.12□□□□□ -1.91
NOD1Q9Y239 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NOD1Q9Y239 RNA5SP383-201ENST00000362934 120 ntBASIC3.11□□□□□ -1.91
NOD1Q9Y239 SNORD56.3-201ENST00000363507 71 ntBASIC3.11□□□□□ -1.91
NOD1Q9Y239 SNORA27-201ENST00000384323 126 ntBASIC3.11□□□□□ -1.91
NOD1Q9Y239 RNU6-424P-201ENST00000384367 105 ntBASIC3.11□□□□□ -1.91
NOD1Q9Y239 U8.16-201ENST00000391279 133 ntBASIC3.11□□□□□ -1.91
NOD1Q9Y239 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.11□□□□□ -1.91
NOD1Q9Y239 RNA5SP281-201ENST00000516504 135 ntBASIC3.11□□□□□ -1.91
NOD1Q9Y239 AC078899.2-201ENST00000595282 212 ntBASIC3.11□□□□□ -1.91
NOD1Q9Y239 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.11□□□□□ -1.91
NOD1Q9Y239 RNU4-16P-201ENST00000364737 141 ntBASIC3.1□□□□□ -1.91
NOD1Q9Y239 RNU6-950P-201ENST00000384651 107 ntBASIC3.1□□□□□ -1.91
NOD1Q9Y239 RNU6-1104P-201ENST00000384723 104 ntBASIC3.1□□□□□ -1.91
NOD1Q9Y239 MIR9-1-201ENST00000385198 89 ntBASIC3.1□□□□□ -1.91
NOD1Q9Y239 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
NOD1Q9Y239 AC022523.2-201ENST00000561045 150 ntBASIC3.1□□□□□ -1.91
NOD1Q9Y239 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NOD1Q9Y239 AP006437.1-201ENST00000641440 3685 ntBASIC3.09□□□□□ -1.91
NOD1Q9Y239 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
NOD1Q9Y239 RNU6-833P-201ENST00000363486 107 ntBASIC3.09□□□□□ -1.91
NOD1Q9Y239 MIR1283-2-201ENST00000408621 87 ntBASIC3.09□□□□□ -1.91
NOD1Q9Y239 SNORA72.7-201ENST00000516349 94 ntBASIC3.09□□□□□ -1.91
NOD1Q9Y239 RNA5SP168-201ENST00000516642 112 ntBASIC3.09□□□□□ -1.91
NOD1Q9Y239 MIR3683-201ENST00000580847 82 ntBASIC3.09□□□□□ -1.91
NOD1Q9Y239 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
NOD1Q9Y239 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NOD1Q9Y239 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NOD1Q9Y239 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.08□□□□□ -1.92
NOD1Q9Y239 SNORA63D-201ENST00000364359 132 ntBASIC3.08□□□□□ -1.92
NOD1Q9Y239 U8.6-201ENST00000364939 135 ntBASIC3.08□□□□□ -1.92
NOD1Q9Y239 SNORA4.2-201ENST00000365313 147 ntBASIC3.08□□□□□ -1.92
NOD1Q9Y239 Y_RNA.348-201ENST00000365403 103 ntBASIC3.08□□□□□ -1.92
NOD1Q9Y239 Y_RNA.369-201ENST00000365568 117 ntBASIC3.08□□□□□ -1.92
NOD1Q9Y239 RNU6-1113P-201ENST00000384348 107 ntBASIC3.08□□□□□ -1.92
NOD1Q9Y239 HMGN2P3-201ENST00000433603 273 ntBASIC3.08□□□□□ -1.92
NOD1Q9Y239 HMGN2P5-201ENST00000436882 273 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms