Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC097462.1-201ENST00000514125 324 ntBASIC3.42□□□□□ -1.86
COL17A1Q9UMD9 RNU6-1337P-201ENST00000516525 95 ntBASIC3.42□□□□□ -1.86
COL17A1Q9UMD9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.42□□□□□ -1.86
COL17A1Q9UMD9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL17A1Q9UMD9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
COL17A1Q9UMD9 Y_RNA.213-201ENST00000364178 111 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 RNU6-1305P-201ENST00000364353 104 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 SNORD116-22-201ENST00000384430 92 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 RPL39P25-201ENST00000449384 154 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 AL031183.1-201ENST00000457667 207 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 RNU5F-4P-201ENST00000516581 114 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 AC007751.1-201ENST00000529260 376 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 MIR3129-201ENST00000581095 76 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 MIR4506-201ENST00000584693 77 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 AL365205.2-201ENST00000594586 68 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 RNU6-219P-201ENST00000364728 107 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 Y_RNA.426-201ENST00000384068 113 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 RNA5SP112-201ENST00000515937 99 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 RNU6-240P-201ENST00000516098 97 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 SNORD77.4-201ENST00000516158 81 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 RNU6-795P-201ENST00000516323 103 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 MIR4765-201ENST00000585007 77 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 uc_338.4-201ENST00000616635 176 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 AC002064.3-201ENST00000623448 346 ntBASIC3.41□□□□□ -1.86
COL17A1Q9UMD9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
COL17A1Q9UMD9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
COL17A1Q9UMD9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL17A1Q9UMD9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
COL17A1Q9UMD9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.4□□□□□ -1.87
COL17A1Q9UMD9 SNORA1-201ENST00000384107 130 ntBASIC3.4□□□□□ -1.87
COL17A1Q9UMD9 MIR586-201ENST00000385035 97 ntBASIC3.4□□□□□ -1.87
COL17A1Q9UMD9 MIR759-201ENST00000390224 91 ntBASIC3.4□□□□□ -1.87
COL17A1Q9UMD9 AL445646.1-201ENST00000431784 216 ntBASIC3.4□□□□□ -1.87
COL17A1Q9UMD9 HMGN2P20-201ENST00000437531 273 ntBASIC3.4□□□□□ -1.87
COL17A1Q9UMD9 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.4□□□□□ -1.87
COL17A1Q9UMD9 RNA5SP385-201ENST00000515947 110 ntBASIC3.4□□□□□ -1.87
COL17A1Q9UMD9 AC012531.4-201ENST00000616509 177 ntBASIC3.4□□□□□ -1.87
COL17A1Q9UMD9 MIR337-201ENST00000362281 93 ntBASIC3.39□□□□□ -1.87
COL17A1Q9UMD9 RNU6-661P-201ENST00000362409 107 ntBASIC3.39□□□□□ -1.87
COL17A1Q9UMD9 SNORD38C-201ENST00000384381 69 ntBASIC3.39□□□□□ -1.87
COL17A1Q9UMD9 Y_RNA.601-201ENST00000410500 113 ntBASIC3.39□□□□□ -1.87
COL17A1Q9UMD9 RNA5SP270-201ENST00000411361 118 ntBASIC3.39□□□□□ -1.87
COL17A1Q9UMD9 RPS15AP28-201ENST00000435088 386 ntBASIC3.39□□□□□ -1.87
COL17A1Q9UMD9 RNY4P20-201ENST00000516678 93 ntBASIC3.39□□□□□ -1.87
COL17A1Q9UMD9 AC103810.1-201ENST00000579873 453 ntBASIC3.39□□□□□ -1.87
COL17A1Q9UMD9 MIR548Z-201ENST00000584743 97 ntBASIC3.39□□□□□ -1.87
COL17A1Q9UMD9 AC005972.2-201ENST00000604690 348 ntBASIC3.39□□□□□ -1.87
COL17A1Q9UMD9 AL162726.3-218ENST00000636401 95 ntBASIC3.39□□□□□ -1.87
COL17A1Q9UMD9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
COL17A1Q9UMD9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL17A1Q9UMD9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL17A1Q9UMD9 MIR300-201ENST00000401138 83 ntBASIC3.38□□□□□ -1.87
COL17A1Q9UMD9 AC006483.1-201ENST00000487308 313 ntBASIC3.38□□□□□ -1.87
COL17A1Q9UMD9 RNU6-1149P-201ENST00000516810 97 ntBASIC3.38□□□□□ -1.87
COL17A1Q9UMD9 RNU7-116P-201ENST00000516940 62 ntBASIC3.38□□□□□ -1.87
COL17A1Q9UMD9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.38□□□□□ -1.87
COL17A1Q9UMD9 AC090517.3-201ENST00000625170 141 ntBASIC3.38□□□□□ -1.87
COL17A1Q9UMD9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.38□□□□□ -1.87
COL17A1Q9UMD9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
COL17A1Q9UMD9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL17A1Q9UMD9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL17A1Q9UMD9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
COL17A1Q9UMD9 RNU6-486P-201ENST00000363116 107 ntBASIC3.37□□□□□ -1.87
COL17A1Q9UMD9 RNU6-1099P-201ENST00000363533 107 ntBASIC3.37□□□□□ -1.87
COL17A1Q9UMD9 SNORA25.6-201ENST00000364121 118 ntBASIC3.37□□□□□ -1.87
COL17A1Q9UMD9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.37□□□□□ -1.87
COL17A1Q9UMD9 Y_RNA.486-201ENST00000384398 107 ntBASIC3.37□□□□□ -1.87
COL17A1Q9UMD9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.37□□□□□ -1.87
COL17A1Q9UMD9 Pinc.1-201ENST00000616452 154 ntBASIC3.37□□□□□ -1.87
COL17A1Q9UMD9 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.37□□□□□ -1.87
COL17A1Q9UMD9 AC006160.2-201ENST00000637708 154 ntBASIC3.37□□□□□ -1.87
COL17A1Q9UMD9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
COL17A1Q9UMD9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL17A1Q9UMD9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL17A1Q9UMD9 SNORD114-7-201ENST00000362520 77 ntBASIC3.36□□□□□ -1.87
COL17A1Q9UMD9 Y_RNA.94-201ENST00000363068 106 ntBASIC3.36□□□□□ -1.87
COL17A1Q9UMD9 SNORD115-35-201ENST00000365122 82 ntBASIC3.36□□□□□ -1.87
COL17A1Q9UMD9 SNORA67.2-201ENST00000384300 149 ntBASIC3.36□□□□□ -1.87
COL17A1Q9UMD9 MIR548D2-201ENST00000384955 97 ntBASIC3.36□□□□□ -1.87
COL17A1Q9UMD9 MIR548B-201ENST00000385247 97 ntBASIC3.36□□□□□ -1.87
COL17A1Q9UMD9 MIR1294-201ENST00000408503 142 ntBASIC3.36□□□□□ -1.87
COL17A1Q9UMD9 Y_RNA.611-201ENST00000410682 108 ntBASIC3.36□□□□□ -1.87
COL17A1Q9UMD9 RPL23AP91-201ENST00000569211 455 ntBASIC3.36□□□□□ -1.87
COL17A1Q9UMD9 MIR4753-201ENST00000585119 83 ntBASIC3.36□□□□□ -1.87
COL17A1Q9UMD9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.35□□□□□ -1.87
COL17A1Q9UMD9 Y_RNA.66-201ENST00000362862 102 ntBASIC3.35□□□□□ -1.87
COL17A1Q9UMD9 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
COL17A1Q9UMD9 RNU6-816P-201ENST00000390914 107 ntBASIC3.35□□□□□ -1.87
COL17A1Q9UMD9 SNORA12-201ENST00000391162 147 ntBASIC3.35□□□□□ -1.87
COL17A1Q9UMD9 RNU6-1268P-201ENST00000391214 107 ntBASIC3.35□□□□□ -1.87
COL17A1Q9UMD9 SNORA26-201ENST00000391286 122 ntBASIC3.35□□□□□ -1.87
COL17A1Q9UMD9 RNU6-1239P-201ENST00000391310 107 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms