Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU1-133P-201ENST00000364867 167 ntBASIC2.94□□□□□ -1.94
CNTN3Q9P232 SNORD38C-201ENST00000384381 69 ntBASIC2.94□□□□□ -1.94
CNTN3Q9P232 AL627390.1-201ENST00000396055 340 ntBASIC2.94□□□□□ -1.94
CNTN3Q9P232 AL606517.2-201ENST00000442855 241 ntBASIC2.94□□□□□ -1.94
CNTN3Q9P232 UBE2DNL-203ENST00000474922 222 ntBASIC2.94□□□□□ -1.94
CNTN3Q9P232 AC069114.2-201ENST00000604699 304 ntBASIC2.94□□□□□ -1.94
CNTN3Q9P232 AC027279.3-201ENST00000625055 122 ntBASIC2.94□□□□□ -1.94
CNTN3Q9P232 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CNTN3Q9P232 MAPK10-266ENST00000641066 6555 ntBASIC2.94□□□□□ -1.94
CNTN3Q9P232 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CNTN3Q9P232 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CNTN3Q9P232 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CNTN3Q9P232 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CNTN3Q9P232 RNY1P6-201ENST00000384193 109 ntBASIC2.93□□□□□ -1.94
CNTN3Q9P232 RNU1-148P-201ENST00000384472 162 ntBASIC2.93□□□□□ -1.94
CNTN3Q9P232 RNA5SP109-201ENST00000391010 116 ntBASIC2.93□□□□□ -1.94
CNTN3Q9P232 RN7SL499P-201ENST00000481141 276 ntBASIC2.93□□□□□ -1.94
CNTN3Q9P232 SNORD36C-201ENST00000516733 66 ntBASIC2.93□□□□□ -1.94
CNTN3Q9P232 RNA5SP137-201ENST00000516833 135 ntBASIC2.93□□□□□ -1.94
CNTN3Q9P232 SNORA18.7-201ENST00000516910 131 ntBASIC2.93□□□□□ -1.94
CNTN3Q9P232 AC006254.2-201ENST00000603259 279 ntBASIC2.93□□□□□ -1.94
CNTN3Q9P232 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.93□□□□□ -1.94
CNTN3Q9P232 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.93□□□□□ -1.94
CNTN3Q9P232 AC106754.2-201ENST00000623006 233 ntBASIC2.93□□□□□ -1.94
CNTN3Q9P232 AC022513.1-201ENST00000624512 117 ntBASIC2.93□□□□□ -1.94
CNTN3Q9P232 AL589743.1-201ENST00000551932 2712 ntBASIC2.93□□□□□ -1.94
CNTN3Q9P232 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.93□□□□□ -1.94
CNTN3Q9P232 Y_RNA.351-201ENST00000365436 96 ntBASIC2.92□□□□□ -1.94
CNTN3Q9P232 Y_RNA.500-201ENST00000384466 111 ntBASIC2.92□□□□□ -1.94
CNTN3Q9P232 RNU6-950P-201ENST00000384651 107 ntBASIC2.92□□□□□ -1.94
CNTN3Q9P232 MIR1302-5-201ENST00000408164 150 ntBASIC2.92□□□□□ -1.94
CNTN3Q9P232 RNU6-938P-201ENST00000411285 103 ntBASIC2.92□□□□□ -1.94
CNTN3Q9P232 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.92□□□□□ -1.94
CNTN3Q9P232 SNORA9.3-201ENST00000516383 129 ntBASIC2.92□□□□□ -1.94
CNTN3Q9P232 AC084364.2-201ENST00000546924 395 ntBASIC2.92□□□□□ -1.94
CNTN3Q9P232 AC015726.2-201ENST00000620112 122 ntBASIC2.92□□□□□ -1.94
CNTN3Q9P232 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
CNTN3Q9P232 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CNTN3Q9P232 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.91□□□□□ -1.94
CNTN3Q9P232 SNORD115-3-201ENST00000363100 82 ntBASIC2.91□□□□□ -1.94
CNTN3Q9P232 RNU6-163P-201ENST00000384396 106 ntBASIC2.91□□□□□ -1.94
CNTN3Q9P232 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CNTN3Q9P232 RNU6-554P-201ENST00000410466 106 ntBASIC2.91□□□□□ -1.94
CNTN3Q9P232 RN7SKP200-201ENST00000410564 320 ntBASIC2.91□□□□□ -1.94
CNTN3Q9P232 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.91□□□□□ -1.94
CNTN3Q9P232 SUMO1P4-201ENST00000429430 302 ntBASIC2.91□□□□□ -1.94
CNTN3Q9P232 STAG3L5P-204ENST00000443759 179 ntBASIC2.91□□□□□ -1.94
CNTN3Q9P232 RNU6-830P-201ENST00000516353 107 ntBASIC2.91□□□□□ -1.94
CNTN3Q9P232 Y_RNA.677-201ENST00000516401 85 ntBASIC2.91□□□□□ -1.94
CNTN3Q9P232 RNY4P20-201ENST00000516678 93 ntBASIC2.91□□□□□ -1.94
CNTN3Q9P232 AC021443.1-201ENST00000604478 211 ntBASIC2.91□□□□□ -1.94
CNTN3Q9P232 RNU6-94P-201ENST00000607728 107 ntBASIC2.91□□□□□ -1.94
CNTN3Q9P232 AC009487.2-201ENST00000420969 6821 ntBASIC2.91□□□□□ -1.94
CNTN3Q9P232 RNU6-1113P-201ENST00000384348 107 ntBASIC2.9□□□□□ -1.95
CNTN3Q9P232 U8.17-201ENST00000391292 132 ntBASIC2.9□□□□□ -1.95
CNTN3Q9P232 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.9□□□□□ -1.95
CNTN3Q9P232 AC114811.1-201ENST00000507207 168 ntBASIC2.9□□□□□ -1.95
CNTN3Q9P232 AC009831.4-201ENST00000620744 325 ntBASIC2.9□□□□□ -1.95
CNTN3Q9P232 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CNTN3Q9P232 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.9□□□□□ -1.95
CNTN3Q9P232 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNTN3Q9P232 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNTN3Q9P232 RNU6-766P-201ENST00000362478 107 ntBASIC2.89□□□□□ -1.95
CNTN3Q9P232 Y_RNA.163-201ENST00000363702 113 ntBASIC2.89□□□□□ -1.95
CNTN3Q9P232 Y_RNA.298-201ENST00000364960 107 ntBASIC2.89□□□□□ -1.95
CNTN3Q9P232 Y_RNA.323-201ENST00000365157 109 ntBASIC2.89□□□□□ -1.95
CNTN3Q9P232 Y_RNA.549-201ENST00000384657 102 ntBASIC2.89□□□□□ -1.95
CNTN3Q9P232 RNA5SP270-201ENST00000411361 118 ntBASIC2.89□□□□□ -1.95
CNTN3Q9P232 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.89□□□□□ -1.95
CNTN3Q9P232 RNA5SP282-201ENST00000516355 108 ntBASIC2.89□□□□□ -1.95
CNTN3Q9P232 RNU6-537P-201ENST00000517277 103 ntBASIC2.89□□□□□ -1.95
CNTN3Q9P232 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.89□□□□□ -1.95
CNTN3Q9P232 MIR3683-201ENST00000580847 82 ntBASIC2.89□□□□□ -1.95
CNTN3Q9P232 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.89□□□□□ -1.95
CNTN3Q9P232 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNTN3Q9P232 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CNTN3Q9P232 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CNTN3Q9P232 RNU6-1014P-201ENST00000383940 103 ntBASIC2.88□□□□□ -1.95
CNTN3Q9P232 RNU6-424P-201ENST00000384367 105 ntBASIC2.88□□□□□ -1.95
CNTN3Q9P232 AL034345.1-201ENST00000407768 123 ntBASIC2.88□□□□□ -1.95
CNTN3Q9P232 SNORA72.7-201ENST00000516349 94 ntBASIC2.88□□□□□ -1.95
CNTN3Q9P232 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.88□□□□□ -1.95
CNTN3Q9P232 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CNTN3Q9P232 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.88□□□□□ -1.95
CNTN3Q9P232 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CNTN3Q9P232 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.87□□□□□ -1.95
CNTN3Q9P232 MIRLET7C-201ENST00000362160 84 ntBASIC2.87□□□□□ -1.95
CNTN3Q9P232 RNU6-756P-201ENST00000383997 107 ntBASIC2.87□□□□□ -1.95
CNTN3Q9P232 MIR524-201ENST00000385242 87 ntBASIC2.87□□□□□ -1.95
CNTN3Q9P232 RNU7-164P-201ENST00000459221 62 ntBASIC2.87□□□□□ -1.95
CNTN3Q9P232 IGKV3-31-201ENST00000523109 329 ntBASIC2.87□□□□□ -1.95
CNTN3Q9P232 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.87□□□□□ -1.95
CNTN3Q9P232 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.86□□□□□ -1.95
CNTN3Q9P232 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CNTN3Q9P232 SNORA63.5-201ENST00000363548 123 ntBASIC2.86□□□□□ -1.95
CNTN3Q9P232 RNU6-414P-201ENST00000363705 104 ntBASIC2.86□□□□□ -1.95
CNTN3Q9P232 Y_RNA.369-201ENST00000365568 117 ntBASIC2.86□□□□□ -1.95
CNTN3Q9P232 RNU1-52P-201ENST00000384190 164 ntBASIC2.86□□□□□ -1.95
CNTN3Q9P232 MIR196B-201ENST00000384852 84 ntBASIC2.86□□□□□ -1.95
CNTN3Q9P232 BX510359.4-201ENST00000423750 193 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 285.4 ms