Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AL121914.1-201ENST00000450188 156 ntBASIC2.12□□□□□ -2.07
PIF1Q9H611 AC093850.1-201ENST00000454121 251 ntBASIC2.12□□□□□ -2.07
PIF1Q9H611 RNU6-197P-201ENST00000516680 100 ntBASIC2.12□□□□□ -2.07
PIF1Q9H611 AC108706.1-201ENST00000611053 297 ntBASIC2.12□□□□□ -2.07
PIF1Q9H611 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PIF1Q9H611 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.12□□□□□ -2.07
PIF1Q9H611 Y_RNA.23-201ENST00000362496 106 ntBASIC2.11□□□□□ -2.07
PIF1Q9H611 RNU6-457P-201ENST00000363999 107 ntBASIC2.11□□□□□ -2.07
PIF1Q9H611 MIR548I3-201ENST00000408378 149 ntBASIC2.11□□□□□ -2.07
PIF1Q9H611 MIR548I1-201ENST00000408810 149 ntBASIC2.11□□□□□ -2.07
PIF1Q9H611 SNRPGP14-201ENST00000435400 219 ntBASIC2.11□□□□□ -2.07
PIF1Q9H611 RNU6-453P-201ENST00000516819 85 ntBASIC2.11□□□□□ -2.07
PIF1Q9H611 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PIF1Q9H611 SNORD45.3-201ENST00000363836 72 ntBASIC2.1□□□□□ -2.07
PIF1Q9H611 RNU6-682P-201ENST00000363843 106 ntBASIC2.1□□□□□ -2.07
PIF1Q9H611 SNORA1.2-201ENST00000365189 134 ntBASIC2.1□□□□□ -2.07
PIF1Q9H611 RNU6-484P-201ENST00000384016 107 ntBASIC2.1□□□□□ -2.07
PIF1Q9H611 Y_RNA.555-201ENST00000384673 110 ntBASIC2.1□□□□□ -2.07
PIF1Q9H611 RNU6-1067P-201ENST00000384752 107 ntBASIC2.1□□□□□ -2.07
PIF1Q9H611 SNRPGP8-201ENST00000454064 226 ntBASIC2.1□□□□□ -2.07
PIF1Q9H611 AC005840.1-201ENST00000498412 377 ntBASIC2.1□□□□□ -2.07
PIF1Q9H611 AC090142.3-201ENST00000519012 385 ntBASIC2.1□□□□□ -2.07
PIF1Q9H611 FAM106DP-201ENST00000586416 501 ntBASIC2.1□□□□□ -2.07
PIF1Q9H611 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PIF1Q9H611 AL442644.1-201ENST00000454390 3105 ntBASIC2.1□□□□□ -2.07
PIF1Q9H611 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PIF1Q9H611 AC092881.1-201ENST00000638218 2733 ntBASIC2.09□□□□□ -2.07
PIF1Q9H611 Y_RNA.634-201ENST00000364811 113 ntBASIC2.09□□□□□ -2.07
PIF1Q9H611 RNU6-886P-201ENST00000384319 105 ntBASIC2.09□□□□□ -2.07
PIF1Q9H611 Y_RNA.622-201ENST00000411091 108 ntBASIC2.09□□□□□ -2.07
PIF1Q9H611 AL021397.1-201ENST00000451806 248 ntBASIC2.09□□□□□ -2.07
PIF1Q9H611 RNU6-250P-201ENST00000516958 103 ntBASIC2.09□□□□□ -2.07
PIF1Q9H611 GHRLOS.1-201ENST00000610995 70 ntBASIC2.09□□□□□ -2.07
PIF1Q9H611 AC106754.2-201ENST00000623006 233 ntBASIC2.09□□□□□ -2.07
PIF1Q9H611 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PIF1Q9H611 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PIF1Q9H611 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.08□□□□□ -2.08
PIF1Q9H611 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
PIF1Q9H611 Y_RNA.486-201ENST00000384398 107 ntBASIC2.08□□□□□ -2.08
PIF1Q9H611 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.08□□□□□ -2.08
PIF1Q9H611 AC092991.1-201ENST00000477176 376 ntBASIC2.08□□□□□ -2.08
PIF1Q9H611 Y_RNA.662-201ENST00000516028 97 ntBASIC2.08□□□□□ -2.08
PIF1Q9H611 RNU6-1219P-201ENST00000516143 112 ntBASIC2.08□□□□□ -2.08
PIF1Q9H611 RNU6-902P-201ENST00000517212 91 ntBASIC2.08□□□□□ -2.08
PIF1Q9H611 RNA5SP160-201ENST00000364866 120 ntBASIC2.07□□□□□ -2.08
PIF1Q9H611 Y_RNA.500-201ENST00000384466 111 ntBASIC2.07□□□□□ -2.08
PIF1Q9H611 MIR221-201ENST00000385135 110 ntBASIC2.07□□□□□ -2.08
PIF1Q9H611 AC087499.4-201ENST00000448505 178 ntBASIC2.07□□□□□ -2.08
PIF1Q9H611 AC074198.2-201ENST00000508153 258 ntBASIC2.07□□□□□ -2.08
PIF1Q9H611 AL365434.2-201ENST00000607979 234 ntBASIC2.07□□□□□ -2.08
PIF1Q9H611 AL121890.5-201ENST00000620848 304 ntBASIC2.07□□□□□ -2.08
PIF1Q9H611 MIR6852-201ENST00000621699 66 ntBASIC2.07□□□□□ -2.08
PIF1Q9H611 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.07□□□□□ -2.08
PIF1Q9H611 U6.106-201ENST00000636360 105 ntBASIC2.07□□□□□ -2.08
PIF1Q9H611 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
PIF1Q9H611 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PIF1Q9H611 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PIF1Q9H611 RNU6-888P-201ENST00000363010 101 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 MIR526A1-201ENST00000384897 85 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PIF1Q9H611 SNORA48.3-201ENST00000391081 134 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 PCNPP3-201ENST00000393579 471 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 MIR548O-201ENST00000408583 114 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 AL356320.1-201ENST00000429616 163 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 RPL39P39-201ENST00000455840 151 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 RNU6-717P-201ENST00000459076 104 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 RNU6-917P-201ENST00000516294 104 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 RNA5SP281-201ENST00000516504 135 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 RNU7-43P-201ENST00000516554 64 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 SNORA74.3-201ENST00000517108 154 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 MIR4431-201ENST00000579990 94 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 MIR5002-201ENST00000584713 97 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 AC015726.2-201ENST00000620112 122 ntBASIC2.06□□□□□ -2.08
PIF1Q9H611 Y_RNA.180-201ENST00000363867 113 ntBASIC2.05□□□□□ -2.08
PIF1Q9H611 RNU6-643P-201ENST00000384018 107 ntBASIC2.05□□□□□ -2.08
PIF1Q9H611 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.05□□□□□ -2.08
PIF1Q9H611 SNORD116-25-201ENST00000516517 92 ntBASIC2.05□□□□□ -2.08
PIF1Q9H611 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
PIF1Q9H611 AC009831.4-201ENST00000620744 325 ntBASIC2.05□□□□□ -2.08
PIF1Q9H611 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
PIF1Q9H611 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
PIF1Q9H611 RNU4-82P-201ENST00000362443 140 ntBASIC2.04□□□□□ -2.08
PIF1Q9H611 Y_RNA.240-201ENST00000364469 95 ntBASIC2.04□□□□□ -2.08
PIF1Q9H611 Y_RNA.357-201ENST00000365487 109 ntBASIC2.04□□□□□ -2.08
PIF1Q9H611 Y_RNA.412-201ENST00000384001 104 ntBASIC2.04□□□□□ -2.08
PIF1Q9H611 Y_RNA.542-201ENST00000384641 111 ntBASIC2.04□□□□□ -2.08
PIF1Q9H611 MIR516B2-201ENST00000385190 85 ntBASIC2.04□□□□□ -2.08
PIF1Q9H611 RNA5SP338-201ENST00000410495 85 ntBASIC2.04□□□□□ -2.08
PIF1Q9H611 RPL31P63-201ENST00000422565 375 ntBASIC2.04□□□□□ -2.08
PIF1Q9H611 UBE2DNL-203ENST00000474922 222 ntBASIC2.04□□□□□ -2.08
PIF1Q9H611 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PIF1Q9H611 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.04□□□□□ -2.08
PIF1Q9H611 RNA5SP200-201ENST00000516360 103 ntBASIC2.04□□□□□ -2.08
PIF1Q9H611 MIR4285-201ENST00000581001 85 ntBASIC2.04□□□□□ -2.08
PIF1Q9H611 MIR4513-201ENST00000581077 86 ntBASIC2.04□□□□□ -2.08
PIF1Q9H611 AC002984.1-201ENST00000591692 448 ntBASIC2.04□□□□□ -2.08
PIF1Q9H611 RNA5SP289-201ENST00000362332 137 ntBASIC2.03□□□□□ -2.08
PIF1Q9H611 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
PIF1Q9H611 RNU4-53P-201ENST00000410828 140 ntBASIC2.03□□□□□ -2.08
PIF1Q9H611 AC107297.1-201ENST00000459991 176 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms