Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF39Q9H2S5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF39Q9H2S5 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF39Q9H2S5 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RNF39Q9H2S5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF39Q9H2S5 RN7SKP46-201ENST00000515942 234 ntBASIC4.57□□□□□ -1.68
RNF39Q9H2S5 RNU6-1265P-201ENST00000516342 103 ntBASIC4.57□□□□□ -1.68
RNF39Q9H2S5 AC110741.2-201ENST00000605278 268 ntBASIC4.57□□□□□ -1.68
RNF39Q9H2S5 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF39Q9H2S5 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RNF39Q9H2S5 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RNF39Q9H2S5 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF39Q9H2S5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
RNF39Q9H2S5 RNU6-698P-201ENST00000363523 107 ntBASIC4.56□□□□□ -1.68
RNF39Q9H2S5 RNU6-34P-201ENST00000364874 107 ntBASIC4.56□□□□□ -1.68
RNF39Q9H2S5 RNU6-1077P-201ENST00000410506 102 ntBASIC4.56□□□□□ -1.68
RNF39Q9H2S5 AC069285.2-201ENST00000440210 275 ntBASIC4.56□□□□□ -1.68
RNF39Q9H2S5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RNF39Q9H2S5 RPS29P19-201ENST00000479709 171 ntBASIC4.56□□□□□ -1.68
RNF39Q9H2S5 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF39Q9H2S5 UCA1.1-201ENST00000620952 75 ntBASIC4.56□□□□□ -1.68
RNF39Q9H2S5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF39Q9H2S5 MAPK10-286ENST00000641208 8747 ntBASIC4.56□□□□□ -1.68
RNF39Q9H2S5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF39Q9H2S5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF39Q9H2S5 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF39Q9H2S5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF39Q9H2S5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
RNF39Q9H2S5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF39Q9H2S5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF39Q9H2S5 MAPK10-253ENST00000641010 4072 ntBASIC4.55□□□□□ -1.68
RNF39Q9H2S5 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
RNF39Q9H2S5 MIR517B-201ENST00000385102 67 ntBASIC4.55□□□□□ -1.68
RNF39Q9H2S5 MIR134-201ENST00000385258 73 ntBASIC4.55□□□□□ -1.68
RNF39Q9H2S5 MIR1271-201ENST00000408537 86 ntBASIC4.55□□□□□ -1.68
RNF39Q9H2S5 SCARNA16.3-201ENST00000516595 184 ntBASIC4.55□□□□□ -1.68
RNF39Q9H2S5 MIR92B-201ENST00000607575 96 ntBASIC4.55□□□□□ -1.68
RNF39Q9H2S5 AC140113.4-201ENST00000622087 222 ntBASIC4.55□□□□□ -1.68
RNF39Q9H2S5 MIR6739-201ENST00000622461 75 ntBASIC4.55□□□□□ -1.68
RNF39Q9H2S5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF39Q9H2S5 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF39Q9H2S5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF39Q9H2S5 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
RNF39Q9H2S5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF39Q9H2S5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF39Q9H2S5 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF39Q9H2S5 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF39Q9H2S5 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF39Q9H2S5 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RNF39Q9H2S5 SNORA2.1-201ENST00000363089 137 ntBASIC4.54□□□□□ -1.68
RNF39Q9H2S5 AL162151.2-201ENST00000448875 158 ntBASIC4.54□□□□□ -1.68
RNF39Q9H2S5 ABCF2P2-201ENST00000450549 296 ntBASIC4.54□□□□□ -1.68
RNF39Q9H2S5 RNA5SP246-201ENST00000458909 119 ntBASIC4.54□□□□□ -1.68
RNF39Q9H2S5 snoU13.22-201ENST00000459428 104 ntBASIC4.54□□□□□ -1.68
RNF39Q9H2S5 MIR4472-2-201ENST00000582069 67 ntBASIC4.54□□□□□ -1.68
RNF39Q9H2S5 AC013244.2-201ENST00000603396 103 ntBASIC4.54□□□□□ -1.68
RNF39Q9H2S5 PRELID3BP2-201ENST00000605362 201 ntBASIC4.54□□□□□ -1.68
RNF39Q9H2S5 AC021506.2-201ENST00000612354 169 ntBASIC4.54□□□□□ -1.68
RNF39Q9H2S5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF39Q9H2S5 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF39Q9H2S5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF39Q9H2S5 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
RNF39Q9H2S5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF39Q9H2S5 RNA5SP22-201ENST00000365393 109 ntBASIC4.53□□□□□ -1.68
RNF39Q9H2S5 SNORA25B-201ENST00000365507 128 ntBASIC4.53□□□□□ -1.68
RNF39Q9H2S5 MIR599-201ENST00000385069 95 ntBASIC4.53□□□□□ -1.68
RNF39Q9H2S5 RNU6-287P-201ENST00000516230 98 ntBASIC4.53□□□□□ -1.68
RNF39Q9H2S5 MIR7151-201ENST00000617477 60 ntBASIC4.53□□□□□ -1.68
RNF39Q9H2S5 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF39Q9H2S5 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF39Q9H2S5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
RNF39Q9H2S5 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.69
RNF39Q9H2S5 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.52□□□□□ -1.69
RNF39Q9H2S5 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RNF39Q9H2S5 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF39Q9H2S5 RNU6-403P-201ENST00000363163 104 ntBASIC4.52□□□□□ -1.69
RNF39Q9H2S5 AL359837.1-201ENST00000381357 287 ntBASIC4.52□□□□□ -1.69
RNF39Q9H2S5 RNU6-628P-201ENST00000410675 107 ntBASIC4.52□□□□□ -1.69
RNF39Q9H2S5 RNU1-45P-201ENST00000517191 141 ntBASIC4.52□□□□□ -1.69
RNF39Q9H2S5 MIR6875-201ENST00000617506 72 ntBASIC4.52□□□□□ -1.69
RNF39Q9H2S5 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF39Q9H2S5 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF39Q9H2S5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF39Q9H2S5 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF39Q9H2S5 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF39Q9H2S5 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF39Q9H2S5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF39Q9H2S5 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF39Q9H2S5 SNORD93-201ENST00000408813 74 ntBASIC4.51□□□□□ -1.69
RNF39Q9H2S5 AC006011.1-201ENST00000442758 349 ntBASIC4.51□□□□□ -1.69
RNF39Q9H2S5 RN7SL604P-201ENST00000492589 296 ntBASIC4.51□□□□□ -1.69
RNF39Q9H2S5 AC021146.9-201ENST00000512503 156 ntBASIC4.51□□□□□ -1.69
RNF39Q9H2S5 RNU7-41P-201ENST00000515917 61 ntBASIC4.51□□□□□ -1.69
RNF39Q9H2S5 RNU2-58P-201ENST00000516403 183 ntBASIC4.51□□□□□ -1.69
RNF39Q9H2S5 NDUFB9P3-201ENST00000521269 501 ntBASIC4.51□□□□□ -1.69
RNF39Q9H2S5 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF39Q9H2S5 MIR5094-201ENST00000578766 85 ntBASIC4.51□□□□□ -1.69
RNF39Q9H2S5 AL138721.1-201ENST00000616756 179 ntBASIC4.51□□□□□ -1.69
RNF39Q9H2S5 AC034229.5-201ENST00000624258 185 ntBASIC4.51□□□□□ -1.69
RNF39Q9H2S5 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms