Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
VPS16Q9H269 Y_RNA.91-201ENST00000363042 107 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 RNU6-1209P-201ENST00000363655 107 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 SNORD50B-201ENST00000364995 70 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 SNORA8-201ENST00000384574 139 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 MIR562-201ENST00000384894 95 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 RNU6-1186P-201ENST00000410429 97 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 RNU2-55P-201ENST00000411146 174 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 MRPS17P9-201ENST00000511924 393 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 SNORD77.4-201ENST00000516158 81 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 AC073413.2-201ENST00000604332 360 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 uc_338.4-201ENST00000616635 176 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 AP001340.1-201ENST00000624405 217 ntBASIC2.07□□□□□ -2.08
VPS16Q9H269 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
VPS16Q9H269 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
VPS16Q9H269 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
VPS16Q9H269 U8.2-201ENST00000363156 134 ntBASIC2.06□□□□□ -2.08
VPS16Q9H269 Y_RNA.432-201ENST00000384087 111 ntBASIC2.06□□□□□ -2.08
VPS16Q9H269 SNORA70B-201ENST00000384210 135 ntBASIC2.06□□□□□ -2.08
VPS16Q9H269 SNORA11.2-201ENST00000408318 127 ntBASIC2.06□□□□□ -2.08
VPS16Q9H269 RNU6-1096P-201ENST00000517089 102 ntBASIC2.06□□□□□ -2.08
VPS16Q9H269 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS16Q9H269 AC084364.2-201ENST00000546924 395 ntBASIC2.06□□□□□ -2.08
VPS16Q9H269 AL160236.1-201ENST00000556317 195 ntBASIC2.06□□□□□ -2.08
VPS16Q9H269 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS16Q9H269 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS16Q9H269 AL773524.1-201ENST00000614065 229 ntBASIC2.06□□□□□ -2.08
VPS16Q9H269 U6.108-201ENST00000637764 58 ntBASIC2.06□□□□□ -2.08
VPS16Q9H269 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS16Q9H269 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
VPS16Q9H269 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
VPS16Q9H269 SNORA33-201ENST00000363664 130 ntBASIC2.05□□□□□ -2.08
VPS16Q9H269 SNORA16.1-201ENST00000364597 132 ntBASIC2.05□□□□□ -2.08
VPS16Q9H269 MIR539-201ENST00000365690 78 ntBASIC2.05□□□□□ -2.08
VPS16Q9H269 Y_RNA.525-201ENST00000384570 113 ntBASIC2.05□□□□□ -2.08
VPS16Q9H269 MIR520A-201ENST00000384862 85 ntBASIC2.05□□□□□ -2.08
VPS16Q9H269 Y_RNA.629-201ENST00000411368 105 ntBASIC2.05□□□□□ -2.08
VPS16Q9H269 RNA5SP57-201ENST00000459463 123 ntBASIC2.05□□□□□ -2.08
VPS16Q9H269 RPS29P21-201ENST00000496272 170 ntBASIC2.05□□□□□ -2.08
VPS16Q9H269 RNU6-1299P-201ENST00000516316 100 ntBASIC2.05□□□□□ -2.08
VPS16Q9H269 AC091178.2-201ENST00000584401 117 ntBASIC2.05□□□□□ -2.08
VPS16Q9H269 AC097639.2-201ENST00000603159 172 ntBASIC2.05□□□□□ -2.08
VPS16Q9H269 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.05□□□□□ -2.08
VPS16Q9H269 TUG1_4.1-201ENST00000619464 181 ntBASIC2.05□□□□□ -2.08
VPS16Q9H269 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VPS16Q9H269 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
VPS16Q9H269 Y_RNA.81-201ENST00000362997 102 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 RNU6-112P-201ENST00000363599 104 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 Y_RNA.634-201ENST00000364811 113 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 Y_RNA.294-201ENST00000364916 102 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 RNU6-915P-201ENST00000364943 103 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 RNU6-80P-201ENST00000384195 107 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 SNORD20-201ENST00000384550 80 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 SNORA79-201ENST00000408376 140 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 RNA5SP100-201ENST00000410903 110 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 RNA5SP59-201ENST00000410922 110 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 AC245047.4-201ENST00000433189 144 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VPS16Q9H269 RNU7-94P-201ENST00000459576 63 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS16Q9H269 AL163195.1-201ENST00000496941 348 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 RNU2-56P-201ENST00000516826 190 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 AP001328.1-201ENST00000528550 176 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 MIR4648-201ENST00000580107 72 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 AC011603.4-201ENST00000611325 277 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.04□□□□□ -2.08
VPS16Q9H269 RNU6-1080P-201ENST00000383982 107 ntBASIC2.03□□□□□ -2.08
VPS16Q9H269 RPL23AP6-201ENST00000446637 472 ntBASIC2.03□□□□□ -2.08
VPS16Q9H269 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS16Q9H269 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS16Q9H269 RPS26P45-201ENST00000471748 340 ntBASIC2.03□□□□□ -2.08
VPS16Q9H269 NDUFA4P2-201ENST00000489989 244 ntBASIC2.03□□□□□ -2.08
VPS16Q9H269 RNU6-659P-201ENST00000516454 104 ntBASIC2.03□□□□□ -2.08
VPS16Q9H269 Y_RNA.686-201ENST00000516548 134 ntBASIC2.03□□□□□ -2.08
VPS16Q9H269 RNU6-1291P-201ENST00000516591 104 ntBASIC2.03□□□□□ -2.08
VPS16Q9H269 RNU7-149P-201ENST00000516739 59 ntBASIC2.03□□□□□ -2.08
VPS16Q9H269 MIR2681-201ENST00000581814 105 ntBASIC2.03□□□□□ -2.08
VPS16Q9H269 AC012493.3-201ENST00000604494 112 ntBASIC2.03□□□□□ -2.08
VPS16Q9H269 RNU6-215P-201ENST00000365169 102 ntBASIC2.02□□□□□ -2.09
VPS16Q9H269 Y_RNA.353-201ENST00000365440 108 ntBASIC2.02□□□□□ -2.09
VPS16Q9H269 RNU2-7P-201ENST00000410794 178 ntBASIC2.02□□□□□ -2.09
VPS16Q9H269 AC244636.1-201ENST00000421152 228 ntBASIC2.02□□□□□ -2.09
VPS16Q9H269 RNU7-107P-201ENST00000459121 61 ntBASIC2.02□□□□□ -2.09
VPS16Q9H269 RNU4-57P-201ENST00000515980 135 ntBASIC2.02□□□□□ -2.09
VPS16Q9H269 RNA5SP153-201ENST00000516498 76 ntBASIC2.02□□□□□ -2.09
VPS16Q9H269 RNU2-60P-201ENST00000517290 128 ntBASIC2.02□□□□□ -2.09
VPS16Q9H269 MIR4419B-201ENST00000577260 68 ntBASIC2.02□□□□□ -2.09
VPS16Q9H269 U7.2-201ENST00000607576 63 ntBASIC2.02□□□□□ -2.09
VPS16Q9H269 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS16Q9H269 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS16Q9H269 U8.1-201ENST00000362843 134 ntBASIC2.01□□□□□ -2.09
VPS16Q9H269 Y_RNA.66-201ENST00000362862 102 ntBASIC2.01□□□□□ -2.09
VPS16Q9H269 SNORA63D-201ENST00000364359 132 ntBASIC2.01□□□□□ -2.09
VPS16Q9H269 RNU6-1138P-201ENST00000365359 106 ntBASIC2.01□□□□□ -2.09
VPS16Q9H269 Y_RNA.486-201ENST00000384398 107 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms