Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 RN7SKP200-201ENST00000410564 320 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 MRPS17P9-201ENST00000511924 393 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 AC108729.3-201ENST00000513484 108 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 RNU6-406P-201ENST00000516470 107 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 SNORA31.10-201ENST00000516482 106 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 RNA5SP281-201ENST00000516504 135 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 MIR548X2-201ENST00000579776 100 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 MIR3910-1-201ENST00000580936 111 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 AC008507.4-201ENST00000585464 127 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 AC078899.2-201ENST00000595282 212 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 SNORA28-201ENST00000606769 126 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 MIR3658-201ENST00000636291 56 ntBASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
AMBRA1Q9C0C7 RNU6-199P-201ENST00000362954 107 ntBASIC2.01□□□□□ -2.09
AMBRA1Q9C0C7 Y_RNA.91-201ENST00000363042 107 ntBASIC2.01□□□□□ -2.09
AMBRA1Q9C0C7 RNU6-112P-201ENST00000363599 104 ntBASIC2.01□□□□□ -2.09
AMBRA1Q9C0C7 RNU4-11P-201ENST00000365287 132 ntBASIC2.01□□□□□ -2.09
AMBRA1Q9C0C7 RNU6-950P-201ENST00000384651 107 ntBASIC2.01□□□□□ -2.09
AMBRA1Q9C0C7 SNORD72-201ENST00000390994 80 ntBASIC2.01□□□□□ -2.09
AMBRA1Q9C0C7 SNORD37.2-201ENST00000391075 66 ntBASIC2.01□□□□□ -2.09
AMBRA1Q9C0C7 SNORD23.1-201ENST00000408212 104 ntBASIC2.01□□□□□ -2.09
AMBRA1Q9C0C7 RNU2-7P-201ENST00000410794 178 ntBASIC2.01□□□□□ -2.09
AMBRA1Q9C0C7 RNA5SP450-201ENST00000411206 102 ntBASIC2.01□□□□□ -2.09
AMBRA1Q9C0C7 AC025033.1-201ENST00000463883 194 ntBASIC2.01□□□□□ -2.09
AMBRA1Q9C0C7 AP001485.1-201ENST00000604799 199 ntBASIC2.01□□□□□ -2.09
AMBRA1Q9C0C7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
AMBRA1Q9C0C7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
AMBRA1Q9C0C7 AC092881.1-201ENST00000638218 2733 ntBASIC2□□□□□ -2.09
AMBRA1Q9C0C7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
AMBRA1Q9C0C7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
AMBRA1Q9C0C7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2□□□□□ -2.09
AMBRA1Q9C0C7 Y_RNA.4-201ENST00000362333 112 ntBASIC2□□□□□ -2.09
AMBRA1Q9C0C7 U8.5-201ENST00000364528 136 ntBASIC2□□□□□ -2.09
AMBRA1Q9C0C7 SNORD50B-201ENST00000364995 70 ntBASIC2□□□□□ -2.09
AMBRA1Q9C0C7 RNU6-597P-201ENST00000365620 102 ntBASIC2□□□□□ -2.09
AMBRA1Q9C0C7 Y_RNA.497-201ENST00000384447 98 ntBASIC2□□□□□ -2.09
AMBRA1Q9C0C7 MIR513C-201ENST00000401352 84 ntBASIC2□□□□□ -2.09
AMBRA1Q9C0C7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2□□□□□ -2.09
AMBRA1Q9C0C7 HMGN2P38-201ENST00000423806 265 ntBASIC2□□□□□ -2.09
AMBRA1Q9C0C7 STAG3L5P-204ENST00000443759 179 ntBASIC2□□□□□ -2.09
AMBRA1Q9C0C7 RNA5SP200-201ENST00000516360 103 ntBASIC2□□□□□ -2.09
AMBRA1Q9C0C7 RNU6-504P-201ENST00000516568 104 ntBASIC2□□□□□ -2.09
AMBRA1Q9C0C7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2□□□□□ -2.09
AMBRA1Q9C0C7 AC112693.2-201ENST00000556538 232 ntBASIC2□□□□□ -2.09
AMBRA1Q9C0C7 AC097639.2-201ENST00000603159 172 ntBASIC2□□□□□ -2.09
AMBRA1Q9C0C7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
AMBRA1Q9C0C7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.99□□□□□ -2.09
AMBRA1Q9C0C7 RNU6-978P-201ENST00000364371 103 ntBASIC1.99□□□□□ -2.09
AMBRA1Q9C0C7 SNORA25.7-201ENST00000364375 127 ntBASIC1.99□□□□□ -2.09
AMBRA1Q9C0C7 RNU6-296P-201ENST00000384608 107 ntBASIC1.99□□□□□ -2.09
AMBRA1Q9C0C7 SNORA48.3-201ENST00000391081 134 ntBASIC1.99□□□□□ -2.09
AMBRA1Q9C0C7 AL034345.1-201ENST00000407768 123 ntBASIC1.99□□□□□ -2.09
AMBRA1Q9C0C7 RNU6-588P-201ENST00000410281 105 ntBASIC1.99□□□□□ -2.09
AMBRA1Q9C0C7 SNORD45.4-201ENST00000516629 73 ntBASIC1.99□□□□□ -2.09
AMBRA1Q9C0C7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.99□□□□□ -2.09
AMBRA1Q9C0C7 AC120024.3-201ENST00000603167 156 ntBASIC1.99□□□□□ -2.09
AMBRA1Q9C0C7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.99□□□□□ -2.09
AMBRA1Q9C0C7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 snoU2-30.1-201ENST00000365012 70 ntBASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 SNORA4.2-201ENST00000365313 147 ntBASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 Y_RNA.568-201ENST00000384742 113 ntBASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 MIR569-201ENST00000385228 96 ntBASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 AL158823.1-201ENST00000418441 478 ntBASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 TMSB4XP3-201ENST00000445144 114 ntBASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 RNU1-40P-201ENST00000516816 164 ntBASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 RNU1-97P-201ENST00000516872 164 ntBASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 RNU2-19P-201ENST00000517288 84 ntBASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 MIR4448-201ENST00000584360 86 ntBASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
AMBRA1Q9C0C7 AL596028.1-201ENST00000326971 197 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 Y_RNA.66-201ENST00000362862 102 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 SNORD14E-201ENST00000364009 85 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 RNU4-52P-201ENST00000384209 138 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 MIR802-201ENST00000390235 94 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 SNORA75.5-201ENST00000391291 81 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 RNA5SP100-201ENST00000410903 110 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 RNA5SP59-201ENST00000410922 110 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 RPL30P13-201ENST00000418873 348 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 HSPE1P9-201ENST00000440046 311 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 RPL23AP63-201ENST00000498752 471 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 SCARNA16.3-201ENST00000516595 184 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 RNA5SP481-201ENST00000516814 122 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 MIR6840-201ENST00000611937 71 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 AC132825.6-201ENST00000638861 357 ntBASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
AMBRA1Q9C0C7 AL157777.2-201ENST00000258070 137 ntBASIC1.96□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-1082P-201ENST00000364574 107 ntBASIC1.96□□□□□ -2.1
AMBRA1Q9C0C7 Y_RNA.336-201ENST00000365307 109 ntBASIC1.96□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-442P-201ENST00000383968 104 ntBASIC1.96□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-1031P-201ENST00000384773 107 ntBASIC1.96□□□□□ -2.1
AMBRA1Q9C0C7 CYCSP49-201ENST00000420810 319 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms