Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR592-201ENST00000384959 97 ntBASIC2.32□□□□□ -2.04
SSBP3Q9BWW4 CST2P1-201ENST00000425770 87 ntBASIC2.32□□□□□ -2.04
SSBP3Q9BWW4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.32□□□□□ -2.04
SSBP3Q9BWW4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.32□□□□□ -2.04
SSBP3Q9BWW4 AC107297.1-201ENST00000459991 176 ntBASIC2.32□□□□□ -2.04
SSBP3Q9BWW4 DEFB131E-201ENST00000532329 154 ntBASIC2.32□□□□□ -2.04
SSBP3Q9BWW4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SSBP3Q9BWW4 AC245060.5-201ENST00000610778 3293 ntBASIC2.32□□□□□ -2.04
SSBP3Q9BWW4 ICE2P2-201ENST00000483823 2787 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 MIR26A1-201ENST00000362205 77 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 SNORA33-201ENST00000363664 130 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 RNU6-160P-201ENST00000384591 107 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 RNU6-1104P-201ENST00000384723 104 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 RNA5SP482-201ENST00000391269 118 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 AL627390.1-201ENST00000396055 340 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 SNRPGP14-201ENST00000435400 219 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 AC009238.1-201ENST00000442165 424 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 AC009237.6-201ENST00000446969 424 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 RN7SKP12-201ENST00000516275 143 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 RNU7-6P-201ENST00000516845 62 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 ZNF861P-201ENST00000588126 639 ntBASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SSBP3Q9BWW4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 Z82195.2-201ENST00000612348 18351 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 RNU6-1134P-201ENST00000365156 101 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 RNU1-109P-201ENST00000383960 147 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 RNU6-816P-201ENST00000390914 107 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 RNU6-1268P-201ENST00000391214 107 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 RNU6-1239P-201ENST00000391310 107 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 AL138827.1-201ENST00000402666 306 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 SNORD88.1-201ENST00000408684 91 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 RNA5SP184-201ENST00000411071 108 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 RNA5SP492-201ENST00000411330 114 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 PGBD4P5-201ENST00000445958 426 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 SNORA59A-201ENST00000459326 152 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 RN7SKP132-201ENST00000516001 208 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 RNU7-28P-201ENST00000516759 62 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 AC022523.2-201ENST00000561045 150 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 MIR4319-201ENST00000577285 85 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 AC015726.2-201ENST00000620112 122 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 MIR6852-201ENST00000621699 66 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 AC091932.4-201ENST00000623386 200 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 MIR1245B-201ENST00000636115 69 ntBASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
SSBP3Q9BWW4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 MIR342-201ENST00000362212 99 ntBASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 RNU6-859P-201ENST00000362728 107 ntBASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 SNORD114-6-201ENST00000364393 72 ntBASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 Y_RNA.507-201ENST00000384500 99 ntBASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 MIR9-1-201ENST00000385198 89 ntBASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 RNA5SP21-201ENST00000410917 96 ntBASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 AL109933.2-201ENST00000452651 260 ntBASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 TRBV12-1-201ENST00000479785 344 ntBASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 SCARNA23-201ENST00000516060 130 ntBASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 RNU6-638P-201ENST00000516582 104 ntBASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 RNU6-826P-201ENST00000516827 104 ntBASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 FAM71BP1-201ENST00000604431 523 ntBASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SSBP3Q9BWW4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 Y_RNA.10-201ENST00000362371 110 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 RNY3P2-201ENST00000362918 102 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 SNORA25B-201ENST00000365507 128 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 RNU6-573P-201ENST00000383938 106 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 SNORD21-201ENST00000383953 95 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 SNORD38C-201ENST00000384381 69 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 RNU6-443P-201ENST00000384780 107 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 RNU6-1275P-201ENST00000391087 107 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 RNU6-938P-201ENST00000411285 103 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 AC003685.2-201ENST00000422795 395 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 SNX2P2-201ENST00000424553 323 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 AC245047.3-201ENST00000429428 127 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 AL035398.1-201ENST00000430869 322 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 UBBP3-201ENST00000445497 241 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 SNORD109B-201ENST00000458961 67 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 SNORD109A-201ENST00000459128 67 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 RN7SL297P-201ENST00000483161 293 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 AC018868.1-201ENST00000491307 315 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 RNU2-35P-201ENST00000516446 142 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 AC026421.1-201ENST00000519101 163 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 AC078899.2-201ENST00000595282 212 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 AC006023.1-201ENST00000603944 259 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms