Protein–RNA interactions for Protein: Q9BW71

HIRIP3, HIRA-interacting protein 3, humanhuman

Predicted RBP Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIRIP3Q9BW71 AC005840.1-201ENST00000498412 377 ntBASIC2.6□□□□□ -1.99
HIRIP3Q9BW71 RNA5SP481-201ENST00000516814 122 ntBASIC2.6□□□□□ -1.99
HIRIP3Q9BW71 AC100767.1-201ENST00000528178 123 ntBASIC2.6□□□□□ -1.99
HIRIP3Q9BW71 JPX_2.1-201ENST00000614161 69 ntBASIC2.6□□□□□ -1.99
HIRIP3Q9BW71 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 Y_RNA.8-201ENST00000362353 102 ntBASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 MIR1278-201ENST00000408753 81 ntBASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 MLLT10P1-201ENST00000418346 262 ntBASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 Y_RNA.662-201ENST00000516028 97 ntBASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 RNA5SP364-201ENST00000516938 78 ntBASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 AC022254.1-201ENST00000567857 235 ntBASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 MIR2681-201ENST00000581814 105 ntBASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 MIR3935-201ENST00000583472 104 ntBASIC2.59□□□□□ -1.99
HIRIP3Q9BW71 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -2
HIRIP3Q9BW71 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.58□□□□□ -2
HIRIP3Q9BW71 RNU6-674P-201ENST00000363831 107 ntBASIC2.58□□□□□ -2
HIRIP3Q9BW71 SNORD50.2-201ENST00000365465 70 ntBASIC2.58□□□□□ -2
HIRIP3Q9BW71 RNU6-969P-201ENST00000383900 105 ntBASIC2.58□□□□□ -2
HIRIP3Q9BW71 MIR526A2-201ENST00000390198 65 ntBASIC2.58□□□□□ -2
HIRIP3Q9BW71 RNU2-40P-201ENST00000410833 196 ntBASIC2.58□□□□□ -2
HIRIP3Q9BW71 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.58□□□□□ -2
HIRIP3Q9BW71 SNORA31.10-201ENST00000516482 106 ntBASIC2.58□□□□□ -2
HIRIP3Q9BW71 SNORA25.15-201ENST00000516487 89 ntBASIC2.58□□□□□ -2
HIRIP3Q9BW71 MIR4709-201ENST00000577272 72 ntBASIC2.58□□□□□ -2
HIRIP3Q9BW71 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.58□□□□□ -2
HIRIP3Q9BW71 SNORD68-201ENST00000363214 84 ntBASIC2.57□□□□□ -2
HIRIP3Q9BW71 Y_RNA.253-201ENST00000364562 112 ntBASIC2.57□□□□□ -2
HIRIP3Q9BW71 SNORA16.1-201ENST00000364597 132 ntBASIC2.57□□□□□ -2
HIRIP3Q9BW71 MIR626-201ENST00000385032 94 ntBASIC2.57□□□□□ -2
HIRIP3Q9BW71 FTH1P12-201ENST00000432137 551 ntBASIC2.57□□□□□ -2
HIRIP3Q9BW71 snoU13.27-201ENST00000459278 104 ntBASIC2.57□□□□□ -2
HIRIP3Q9BW71 TRMT112P2-201ENST00000512910 132 ntBASIC2.57□□□□□ -2
HIRIP3Q9BW71 RNU7-28P-201ENST00000516759 62 ntBASIC2.57□□□□□ -2
HIRIP3Q9BW71 SNORA44.1-201ENST00000517031 108 ntBASIC2.57□□□□□ -2
HIRIP3Q9BW71 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.57□□□□□ -2
HIRIP3Q9BW71 RPL23AP91-201ENST00000569211 455 ntBASIC2.57□□□□□ -2
HIRIP3Q9BW71 SNORA28-201ENST00000606769 126 ntBASIC2.57□□□□□ -2
HIRIP3Q9BW71 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.57□□□□□ -2
HIRIP3Q9BW71 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
HIRIP3Q9BW71 MIR126-201ENST00000362291 85 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 RNU6-661P-201ENST00000362409 107 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 RNU4-17P-201ENST00000365598 141 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 Y_RNA.572-201ENST00000384757 98 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 MIR613-201ENST00000385248 95 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 RNU6-131P-201ENST00000391144 107 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 SUMO2P12-201ENST00000405924 140 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 AL034345.1-201ENST00000407768 123 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 TMSB4XP3-201ENST00000445144 114 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 HMGN1P7-201ENST00000491722 313 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 MIR4419B-201ENST00000577260 68 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 AL359821.1-201ENST00000605519 182 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 AC108706.1-201ENST00000611053 297 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 AL591926.4-201ENST00000616895 298 ntBASIC2.56□□□□□ -2
HIRIP3Q9BW71 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
HIRIP3Q9BW71 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
HIRIP3Q9BW71 RNU6-1209P-201ENST00000363655 107 ntBASIC2.55□□□□□ -2
HIRIP3Q9BW71 SNORA25.9-201ENST00000365087 128 ntBASIC2.55□□□□□ -2
HIRIP3Q9BW71 Y_RNA.412-201ENST00000384001 104 ntBASIC2.55□□□□□ -2
HIRIP3Q9BW71 RNA5SP482-201ENST00000391269 118 ntBASIC2.55□□□□□ -2
HIRIP3Q9BW71 SNRPGP10-201ENST00000432323 225 ntBASIC2.55□□□□□ -2
HIRIP3Q9BW71 RNU6-250P-201ENST00000516958 103 ntBASIC2.55□□□□□ -2
HIRIP3Q9BW71 MIR3683-201ENST00000580847 82 ntBASIC2.55□□□□□ -2
HIRIP3Q9BW71 MIR4448-201ENST00000584360 86 ntBASIC2.55□□□□□ -2
HIRIP3Q9BW71 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.55□□□□□ -2
HIRIP3Q9BW71 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.55□□□□□ -2
HIRIP3Q9BW71 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.54□□□□□ -2
HIRIP3Q9BW71 RNY1P10-201ENST00000363268 113 ntBASIC2.54□□□□□ -2
HIRIP3Q9BW71 Y_RNA.796-201ENST00000364268 102 ntBASIC2.54□□□□□ -2
HIRIP3Q9BW71 Y_RNA.272-201ENST00000364696 102 ntBASIC2.54□□□□□ -2
HIRIP3Q9BW71 Y_RNA.799-201ENST00000364992 102 ntBASIC2.54□□□□□ -2
HIRIP3Q9BW71 Y_RNA.571-201ENST00000384753 98 ntBASIC2.54□□□□□ -2
HIRIP3Q9BW71 MIR489-201ENST00000384923 84 ntBASIC2.54□□□□□ -2
HIRIP3Q9BW71 Y_RNA.580-201ENST00000391004 95 ntBASIC2.54□□□□□ -2
HIRIP3Q9BW71 RNU4-62P-201ENST00000410125 130 ntBASIC2.54□□□□□ -2
HIRIP3Q9BW71 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.54□□□□□ -2
HIRIP3Q9BW71 AC023449.1-201ENST00000454464 154 ntBASIC2.54□□□□□ -2
HIRIP3Q9BW71 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.54□□□□□ -2
HIRIP3Q9BW71 MIR5688-201ENST00000580619 83 ntBASIC2.54□□□□□ -2
HIRIP3Q9BW71 snoU2_19.4-201ENST00000364329 80 ntBASIC2.53□□□□□ -2
HIRIP3Q9BW71 RNA5SP272-201ENST00000516095 111 ntBASIC2.53□□□□□ -2
HIRIP3Q9BW71 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.53□□□□□ -2
HIRIP3Q9BW71 Y_RNA.714-201ENST00000517065 90 ntBASIC2.53□□□□□ -2
HIRIP3Q9BW71 MIR4303-201ENST00000581299 66 ntBASIC2.53□□□□□ -2
HIRIP3Q9BW71 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HIRIP3Q9BW71 RNU6-414P-201ENST00000363705 104 ntBASIC2.52□□□□□ -2.01
HIRIP3Q9BW71 SNORD48-201ENST00000364953 64 ntBASIC2.52□□□□□ -2.01
HIRIP3Q9BW71 RNU6-1031P-201ENST00000384773 107 ntBASIC2.52□□□□□ -2.01
HIRIP3Q9BW71 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HIRIP3Q9BW71 RNU6-360P-201ENST00000390944 104 ntBASIC2.52□□□□□ -2.01
HIRIP3Q9BW71 AP1B1P2-201ENST00000416196 106 ntBASIC2.52□□□□□ -2.01
HIRIP3Q9BW71 AC245047.8-201ENST00000456455 284 ntBASIC2.52□□□□□ -2.01
HIRIP3Q9BW71 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.52□□□□□ -2.01
HIRIP3Q9BW71 SCARNA8-201ENST00000515924 131 ntBASIC2.52□□□□□ -2.01
HIRIP3Q9BW71 RNU2-4P-201ENST00000606190 192 ntBASIC2.52□□□□□ -2.01
HIRIP3Q9BW71 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms