Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SNORD38.1-201ENST00000363863 68 ntBASIC3.31□□□□□ -1.88
USB1Q9BQ65 RNU6-1163P-201ENST00000364516 107 ntBASIC3.31□□□□□ -1.88
USB1Q9BQ65 AL359837.1-201ENST00000381357 287 ntBASIC3.31□□□□□ -1.88
USB1Q9BQ65 RNU6-950P-201ENST00000384651 107 ntBASIC3.31□□□□□ -1.88
USB1Q9BQ65 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
USB1Q9BQ65 RNA5SP424-201ENST00000390988 115 ntBASIC3.31□□□□□ -1.88
USB1Q9BQ65 Y_RNA.609-201ENST00000410669 89 ntBASIC3.31□□□□□ -1.88
USB1Q9BQ65 RNU7-73P-201ENST00000458743 63 ntBASIC3.31□□□□□ -1.88
USB1Q9BQ65 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
USB1Q9BQ65 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.31□□□□□ -1.88
USB1Q9BQ65 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.31□□□□□ -1.88
USB1Q9BQ65 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.3□□□□□ -1.88
USB1Q9BQ65 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
USB1Q9BQ65 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
USB1Q9BQ65 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
USB1Q9BQ65 RNU1-58P-201ENST00000362413 163 ntBASIC3.3□□□□□ -1.88
USB1Q9BQ65 RNU6-913P-201ENST00000390913 95 ntBASIC3.3□□□□□ -1.88
USB1Q9BQ65 AC104332.2-201ENST00000429959 156 ntBASIC3.3□□□□□ -1.88
USB1Q9BQ65 RNU1-95P-201ENST00000516357 160 ntBASIC3.3□□□□□ -1.88
USB1Q9BQ65 RNU1-128P-201ENST00000516704 160 ntBASIC3.3□□□□□ -1.88
USB1Q9BQ65 RNU6-1006P-201ENST00000516998 103 ntBASIC3.3□□□□□ -1.88
USB1Q9BQ65 AC026403.1-201ENST00000518938 295 ntBASIC3.3□□□□□ -1.88
USB1Q9BQ65 MIR5094-201ENST00000578766 85 ntBASIC3.3□□□□□ -1.88
USB1Q9BQ65 MIR4444-1-201ENST00000581696 74 ntBASIC3.3□□□□□ -1.88
USB1Q9BQ65 MIR4444-2-201ENST00000584390 74 ntBASIC3.3□□□□□ -1.88
USB1Q9BQ65 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USB1Q9BQ65 AC243994.1-201ENST00000618627 109 ntBASIC3.3□□□□□ -1.88
USB1Q9BQ65 SNORD3E-202ENST00000627253 216 ntBASIC3.3□□□□□ -1.88
USB1Q9BQ65 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.3□□□□□ -1.88
USB1Q9BQ65 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USB1Q9BQ65 MIR7-3-201ENST00000384898 110 ntBASIC3.29□□□□□ -1.88
USB1Q9BQ65 AL445685.2-201ENST00000422551 342 ntBASIC3.29□□□□□ -1.88
USB1Q9BQ65 RPS29P31-201ENST00000446147 164 ntBASIC3.29□□□□□ -1.88
USB1Q9BQ65 RPS27P29-201ENST00000463110 252 ntBASIC3.29□□□□□ -1.88
USB1Q9BQ65 RN7SL601P-201ENST00000471221 293 ntBASIC3.29□□□□□ -1.88
USB1Q9BQ65 AC006483.1-201ENST00000487308 313 ntBASIC3.29□□□□□ -1.88
USB1Q9BQ65 NDUFB9P3-201ENST00000521269 501 ntBASIC3.29□□□□□ -1.88
USB1Q9BQ65 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.29□□□□□ -1.88
USB1Q9BQ65 SNORA62.6-201ENST00000606322 83 ntBASIC3.29□□□□□ -1.88
USB1Q9BQ65 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
USB1Q9BQ65 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
USB1Q9BQ65 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
USB1Q9BQ65 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
USB1Q9BQ65 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
USB1Q9BQ65 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
USB1Q9BQ65 AL035423.1-201ENST00000420331 213 ntBASIC3.28□□□□□ -1.88
USB1Q9BQ65 RN7SL594P-201ENST00000470590 287 ntBASIC3.28□□□□□ -1.88
USB1Q9BQ65 SCARNA14-201ENST00000516903 136 ntBASIC3.28□□□□□ -1.88
USB1Q9BQ65 MIR548AR-201ENST00000582191 57 ntBASIC3.28□□□□□ -1.88
USB1Q9BQ65 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.28□□□□□ -1.88
USB1Q9BQ65 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.27□□□□□ -1.89
USB1Q9BQ65 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.27□□□□□ -1.89
USB1Q9BQ65 SNORA5A-201ENST00000384111 134 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 MIR206-201ENST00000384872 86 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
USB1Q9BQ65 MIR1289-1-201ENST00000408836 144 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 ATP5A1P2-201ENST00000412323 255 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 RPS29P28-201ENST00000446439 141 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.27□□□□□ -1.89
USB1Q9BQ65 snoU13.22-201ENST00000459428 104 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 AC139453.2-201ENST00000487255 133 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 RNU6-826P-201ENST00000516827 104 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 RNA5SP380-201ENST00000517190 98 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 AC022695.1-201ENST00000522089 237 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 MIR4429-201ENST00000580105 73 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 MIR3944-201ENST00000581277 108 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 MIR92B-201ENST00000607575 96 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 AL121772.2-201ENST00000614331 297 ntBASIC3.27□□□□□ -1.89
USB1Q9BQ65 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
USB1Q9BQ65 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
USB1Q9BQ65 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
USB1Q9BQ65 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.27□□□□□ -1.89
USB1Q9BQ65 AP000648.3-201ENST00000623539 4507 ntBASIC3.26□□□□□ -1.89
USB1Q9BQ65 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
USB1Q9BQ65 Y_RNA.316-201ENST00000365118 111 ntBASIC3.26□□□□□ -1.89
USB1Q9BQ65 U8.11-201ENST00000384699 133 ntBASIC3.26□□□□□ -1.89
USB1Q9BQ65 MIR29C-201ENST00000385231 88 ntBASIC3.26□□□□□ -1.89
USB1Q9BQ65 SNORD28B-201ENST00000390993 75 ntBASIC3.26□□□□□ -1.89
USB1Q9BQ65 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.26□□□□□ -1.89
USB1Q9BQ65 AC093850.1-201ENST00000454121 251 ntBASIC3.26□□□□□ -1.89
USB1Q9BQ65 U8.18-201ENST00000459285 133 ntBASIC3.26□□□□□ -1.89
USB1Q9BQ65 AC019176.2-201ENST00000611579 315 ntBASIC3.26□□□□□ -1.89
USB1Q9BQ65 SEPT14P17-201ENST00000617978 177 ntBASIC3.26□□□□□ -1.89
USB1Q9BQ65 AP000553.6-201ENST00000641242 118 ntBASIC3.26□□□□□ -1.89
USB1Q9BQ65 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
USB1Q9BQ65 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
USB1Q9BQ65 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.25□□□□□ -1.89
USB1Q9BQ65 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
USB1Q9BQ65 AL356274.2-201ENST00000624379 3752 ntBASIC3.25□□□□□ -1.89
USB1Q9BQ65 RNU6-1031P-201ENST00000384773 107 ntBASIC3.25□□□□□ -1.89
USB1Q9BQ65 RNU6-1307P-201ENST00000391012 103 ntBASIC3.25□□□□□ -1.89
USB1Q9BQ65 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
USB1Q9BQ65 AC110768.1-201ENST00000509222 400 ntBASIC3.25□□□□□ -1.89
USB1Q9BQ65 AL449363.1-201ENST00000617815 186 ntBASIC3.25□□□□□ -1.89
USB1Q9BQ65 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.25□□□□□ -1.89
USB1Q9BQ65 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
USB1Q9BQ65 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
USB1Q9BQ65 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
USB1Q9BQ65 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
USB1Q9BQ65 RNA5SP119-201ENST00000362715 117 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms