Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 RNU6-740P-201ENST00000364734 105 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 MTCYBP39-201ENST00000437562 491 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 NDUFA5P7-201ENST00000452914 242 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 AC091951.3-201ENST00000504093 246 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.23□□□□□ -2.61
COL12A1Q99715 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 AC138649.3-201ENST00000622154 254 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 RNU6-694P-201ENST00000364071 147 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 AC115990.1-201ENST00000526957 301 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 MIR548W-201ENST00000581970 74 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 MIRLET7C-201ENST00000362160 84 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 AL354751.2-201ENST00000415471 210 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 AC019178.2-201ENST00000423595 505 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 AC104850.1-201ENST00000435940 476 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 AC244090.1-201ENST00000441884 93 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.24□□□□□ -2.61
COL12A1Q99715 AC120024.3-201ENST00000603167 156 ntBASIC-1.24□□□□□ -2.61
COL12A1Q99715 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.25□□□□□ -2.61
COL12A1Q99715 USP9YP28-201ENST00000435142 589 ntBASIC-1.25□□□□□ -2.61
COL12A1Q99715 RNU6-958P-201ENST00000516995 106 ntBASIC-1.25□□□□□ -2.61
COL12A1Q99715 MIR4753-201ENST00000585119 83 ntBASIC-1.25□□□□□ -2.61
COL12A1Q99715 MIR6082-201ENST00000613604 109 ntBASIC-1.25□□□□□ -2.61
COL12A1Q99715 RNU6-223P-201ENST00000362830 107 ntBASIC-1.25□□□□□ -2.61
COL12A1Q99715 RNU6-665P-201ENST00000384639 107 ntBASIC-1.25□□□□□ -2.61
COL12A1Q99715 MIR1305-201ENST00000408300 86 ntBASIC-1.25□□□□□ -2.61
COL12A1Q99715 RNU6-416P-201ENST00000516265 103 ntBASIC-1.25□□□□□ -2.61
COL12A1Q99715 RNU6-58P-201ENST00000517143 103 ntBASIC-1.25□□□□□ -2.61
COL12A1Q99715 CPDP1-201ENST00000579660 283 ntBASIC-1.25□□□□□ -2.61
COL12A1Q99715 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-1.25□□□□□ -2.61
COL12A1Q99715 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 SNORA62.4-201ENST00000365504 151 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 RNU6-949P-201ENST00000384040 107 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 SNORD38B-201ENST00000384690 67 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 MIR363-201ENST00000384840 75 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 MIR452-201ENST00000385020 85 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 RNU4-22P-201ENST00000411058 166 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.26□□□□□ -2.61
COL12A1Q99715 RNU7-99P-201ENST00000516271 62 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 RNU6-143P-201ENST00000516942 93 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 AC068587.5-201ENST00000528506 175 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 AL158042.1-201ENST00000605338 460 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 AC011373.1-201ENST00000607270 237 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 AC104073.3-201ENST00000610942 955 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 RNA5SP237-201ENST00000410414 113 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.26□□□□□ -2.61
COL12A1Q99715 RNU7-104P-201ENST00000459398 79 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.26□□□□□ -2.61
COL12A1Q99715 AL133255.1-201ENST00000606374 441 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 U6.101-201ENST00000637707 76 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 AL445523.1-201ENST00000451184 1362 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 RNU6-865P-201ENST00000364772 107 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 RNU6-641P-201ENST00000384006 107 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 Y_RNA.548-201ENST00000384656 105 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 MT-TF-201ENST00000387314 71 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 MIR1283-1-201ENST00000408494 87 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 RNU2-28P-201ENST00000410457 189 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 RNU6-1245P-201ENST00000411130 106 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.26□□□□□ -2.61
COL12A1Q99715 AC104629.1-201ENST00000494226 508 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 AC022447.4-201ENST00000504053 364 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 AL138889.2-201ENST00000603883 242 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 AC010608.3-201ENST00000625048 527 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 SNORD98-201ENST00000636377 67 ntBASIC-1.26□□□□□ -2.61
COL12A1Q99715 RNU6-227P-201ENST00000362865 103 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 RNU6-563P-201ENST00000364872 108 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 MIR652-201ENST00000385278 98 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 AC013470.1-201ENST00000453438 462 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 AC103996.1-201ENST00000555468 102 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 LARP7P2-201ENST00000575306 125 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 RNY3P13-201ENST00000365542 102 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 AC117470.1-201ENST00000381974 330 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 MIR562-201ENST00000384894 95 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 PIGPP3-201ENST00000425307 415 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 RNU7-161P-201ENST00000517289 62 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.27□□□□□ -2.61
COL12A1Q99715 MIR3923-201ENST00000579521 83 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 BNIP3P9-201ENST00000603714 553 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 AC103591.3-201ENST00000608684 209 ntBASIC-1.27□□□□□ -2.61
COL12A1Q99715 RNU6-1339P-201ENST00000363574 91 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms