Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 MRPS17P9-201ENST00000511924 393 ntBASIC2.14□□□□□ -2.07
PNKPQ96T60 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.14□□□□□ -2.07
PNKPQ96T60 AC120024.3-201ENST00000603167 156 ntBASIC2.14□□□□□ -2.07
PNKPQ96T60 AP001485.1-201ENST00000604799 199 ntBASIC2.14□□□□□ -2.07
PNKPQ96T60 MIR6844-201ENST00000637122 62 ntBASIC2.14□□□□□ -2.07
PNKPQ96T60 AC132825.6-201ENST00000638861 357 ntBASIC2.14□□□□□ -2.07
PNKPQ96T60 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
PNKPQ96T60 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PNKPQ96T60 RNU6-199P-201ENST00000362954 107 ntBASIC2.13□□□□□ -2.07
PNKPQ96T60 RNU6-1138P-201ENST00000365359 106 ntBASIC2.13□□□□□ -2.07
PNKPQ96T60 Y_RNA.393-201ENST00000383936 102 ntBASIC2.13□□□□□ -2.07
PNKPQ96T60 RNU1-52P-201ENST00000384190 164 ntBASIC2.13□□□□□ -2.07
PNKPQ96T60 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.13□□□□□ -2.07
PNKPQ96T60 RNU6-588P-201ENST00000410281 105 ntBASIC2.13□□□□□ -2.07
PNKPQ96T60 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
PNKPQ96T60 AC112693.2-201ENST00000556538 232 ntBASIC2.13□□□□□ -2.07
PNKPQ96T60 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.13□□□□□ -2.07
PNKPQ96T60 MIR8054-201ENST00000620877 86 ntBASIC2.13□□□□□ -2.07
PNKPQ96T60 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.13□□□□□ -2.07
PNKPQ96T60 RNY1P11-201ENST00000363759 113 ntBASIC2.12□□□□□ -2.07
PNKPQ96T60 RNU6-978P-201ENST00000364371 103 ntBASIC2.12□□□□□ -2.07
PNKPQ96T60 RNU6-1082P-201ENST00000364574 107 ntBASIC2.12□□□□□ -2.07
PNKPQ96T60 SNORA20-201ENST00000384662 132 ntBASIC2.12□□□□□ -2.07
PNKPQ96T60 RNU6-440P-201ENST00000390882 105 ntBASIC2.12□□□□□ -2.07
PNKPQ96T60 MIR513C-201ENST00000401352 84 ntBASIC2.12□□□□□ -2.07
PNKPQ96T60 RNA5SP501-201ENST00000410990 112 ntBASIC2.12□□□□□ -2.07
PNKPQ96T60 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.12□□□□□ -2.07
PNKPQ96T60 SNORA31.10-201ENST00000516482 106 ntBASIC2.12□□□□□ -2.07
PNKPQ96T60 RNA5SP153-201ENST00000516498 76 ntBASIC2.12□□□□□ -2.07
PNKPQ96T60 RNU6-548P-201ENST00000517083 115 ntBASIC2.12□□□□□ -2.07
PNKPQ96T60 AL160236.1-201ENST00000556317 195 ntBASIC2.12□□□□□ -2.07
PNKPQ96T60 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.12□□□□□ -2.07
PNKPQ96T60 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.12□□□□□ -2.07
PNKPQ96T60 ZNF355P-201ENST00000427301 3216 ntBASIC2.12□□□□□ -2.07
PNKPQ96T60 Y_RNA.265-201ENST00000364677 108 ntBASIC2.11□□□□□ -2.07
PNKPQ96T60 U8.13-201ENST00000390842 128 ntBASIC2.11□□□□□ -2.07
PNKPQ96T60 AC019129.1-201ENST00000403786 261 ntBASIC2.11□□□□□ -2.07
PNKPQ96T60 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.11□□□□□ -2.07
PNKPQ96T60 FTH1P12-201ENST00000432137 551 ntBASIC2.11□□□□□ -2.07
PNKPQ96T60 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.11□□□□□ -2.07
PNKPQ96T60 RNU7-193P-201ENST00000516723 65 ntBASIC2.11□□□□□ -2.07
PNKPQ96T60 RNU6-295P-201ENST00000516901 104 ntBASIC2.11□□□□□ -2.07
PNKPQ96T60 MIR3646-201ENST00000578301 84 ntBASIC2.11□□□□□ -2.07
PNKPQ96T60 MIR4662B-201ENST00000579498 81 ntBASIC2.11□□□□□ -2.07
PNKPQ96T60 AC008507.4-201ENST00000585464 127 ntBASIC2.11□□□□□ -2.07
PNKPQ96T60 AC097639.2-201ENST00000603159 172 ntBASIC2.11□□□□□ -2.07
PNKPQ96T60 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PNKPQ96T60 SNORD50B-201ENST00000364995 70 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 SNORA4.2-201ENST00000365313 147 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PNKPQ96T60 SNORA48.1-201ENST00000390879 135 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 AL606753.1-201ENST00000427435 87 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 HSPE1P9-201ENST00000440046 311 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 STAG3L5P-204ENST00000443759 179 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 RNU7-197P-201ENST00000458836 62 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 AC092991.1-201ENST00000477176 376 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 SNORA31.25-201ENST00000517242 134 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PNKPQ96T60 SNRPGP19-201ENST00000603826 189 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 Y_RNA.783-201ENST00000613546 102 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 AL353997.5-201ENST00000618886 171 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 AC091895.1-201ENST00000624494 256 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.1□□□□□ -2.07
PNKPQ96T60 ICE2P2-201ENST00000483823 2787 ntBASIC2.1□□□□□ -2.07
PNKPQ96T60 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
PNKPQ96T60 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
PNKPQ96T60 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PNKPQ96T60 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.09□□□□□ -2.07
PNKPQ96T60 RNA5SP99-201ENST00000364020 114 ntBASIC2.09□□□□□ -2.07
PNKPQ96T60 SNORA63D-201ENST00000364359 132 ntBASIC2.09□□□□□ -2.07
PNKPQ96T60 RNU6-597P-201ENST00000365620 102 ntBASIC2.09□□□□□ -2.07
PNKPQ96T60 RNU6-257P-201ENST00000410238 98 ntBASIC2.09□□□□□ -2.07
PNKPQ96T60 RPL30P13-201ENST00000418873 348 ntBASIC2.09□□□□□ -2.07
PNKPQ96T60 HMGN2P19-201ENST00000425149 265 ntBASIC2.09□□□□□ -2.07
PNKPQ96T60 HMGN2P23-201ENST00000456759 269 ntBASIC2.09□□□□□ -2.07
PNKPQ96T60 Y_RNA.714-201ENST00000517065 90 ntBASIC2.09□□□□□ -2.07
PNKPQ96T60 RNU6-365P-201ENST00000517113 106 ntBASIC2.09□□□□□ -2.07
PNKPQ96T60 SUB1P4-201ENST00000566062 339 ntBASIC2.09□□□□□ -2.07
PNKPQ96T60 MIR5089-201ENST00000580047 84 ntBASIC2.09□□□□□ -2.07
PNKPQ96T60 AC245884.12-201ENST00000615364 59 ntBASIC2.09□□□□□ -2.07
PNKPQ96T60 AC010332.2-201ENST00000613083 1904 ntBASIC2.09□□□□□ -2.08
PNKPQ96T60 RNU6-1084P-201ENST00000362498 107 ntBASIC2.08□□□□□ -2.08
PNKPQ96T60 Y_RNA.66-201ENST00000362862 102 ntBASIC2.08□□□□□ -2.08
PNKPQ96T60 RNU6-460P-201ENST00000391158 108 ntBASIC2.08□□□□□ -2.08
PNKPQ96T60 RNA5SP482-201ENST00000391269 118 ntBASIC2.08□□□□□ -2.08
PNKPQ96T60 SNORA26-201ENST00000391286 122 ntBASIC2.08□□□□□ -2.08
PNKPQ96T60 SNORA75.5-201ENST00000391291 81 ntBASIC2.08□□□□□ -2.08
PNKPQ96T60 SNORA26.9-201ENST00000391322 122 ntBASIC2.08□□□□□ -2.08
PNKPQ96T60 RNA5SP450-201ENST00000411206 102 ntBASIC2.08□□□□□ -2.08
PNKPQ96T60 AL158823.1-201ENST00000418441 478 ntBASIC2.08□□□□□ -2.08
PNKPQ96T60 Y_RNA.666-201ENST00000516187 112 ntBASIC2.08□□□□□ -2.08
PNKPQ96T60 MIR4762-201ENST00000585261 75 ntBASIC2.08□□□□□ -2.08
PNKPQ96T60 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.08□□□□□ -2.08
PNKPQ96T60 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.08□□□□□ -2.08
PNKPQ96T60 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.08□□□□□ -2.08
PNKPQ96T60 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
PNKPQ96T60 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PNKPQ96T60 U8.5-201ENST00000364528 136 ntBASIC2.07□□□□□ -2.08
PNKPQ96T60 RNU6-81P-201ENST00000365608 104 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 1895.1 ms